FFCP PHASE1:Hg19::chr5:143550407..143550439,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=57528 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=29244 | |||
|TSSclassifier=strong | |||
|UniProt=A8K8W2,Q68DU8 | |||
|association_with_transcript=0bp_to_NM_020768,uc003lnm.1_5end | |||
|description=CAGE_peak_5_at_KCTD16_5end | |||
|id=chr5:143550407..143550439,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000895;2.12e-08;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000810,1.18e-08,1;CL:0000895,1.18e-08,1;CL:0002436,1.18e-08,1;CL:0002427,1.18e-08,1;CL:0002428,1.18e-08,1;CL:0002429,1.18e-08,1;CL:0002433,1.18e-08,1;CL:0002431,1.18e-08,1;CL:0002432,1.18e-08,1 | |||
|ontology_enrichment_development_v019=UBERON:0006601;2.38e-13;82!CL:0002427;2.12e-08;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!1.78e-29!57;UBERON:0005068!1.78e-29!57;UBERON:0006241!1.78e-29!57;UBERON:0007135!1.78e-29!57;UBERON:0002616!9.55e-27!59;UBERON:0003075!9.60e-26!86;UBERON:0007284!9.60e-26!86;UBERON:0002346!9.54e-25!90;UBERON:0000955!1.16e-24!69;UBERON:0006238!1.16e-24!69;UBERON:0002780!8.76e-24!41;UBERON:0001890!8.76e-24!41;UBERON:0006240!8.76e-24!41;UBERON:0005743!1.75e-23!86;UBERON:0003080!9.30e-23!42;UBERON:0001017!1.05e-22!82;UBERON:0000073!1.30e-21!94;UBERON:0001016!1.30e-21!94;UBERON:0003056!2.48e-21!61;UBERON:0001893!1.49e-18!34;UBERON:0002020!1.97e-18!34;UBERON:0003528!1.97e-18!34;UBERON:0000153!2.22e-18!129;UBERON:0007811!2.22e-18!129;UBERON:0002791!8.90e-18!33;UBERON:0001869!2.76e-17!32;UBERON:0000033!1.17e-16!123;UBERON:0004121!1.70e-15!169;UBERON:0000924!3.20e-15!173;UBERON:0006601!3.20e-15!173;UBERON:0002619!3.28e-15!22;UBERON:0001950!5.57e-14!20;UBERON:0000956!5.41e-13!25;UBERON:0000203!5.41e-13!25;UBERON:0007023!1.59e-10!115;UBERON:0000475!5.34e-08!365;UBERON:0003076!7.31e-08!15;UBERON:0003057!7.31e-08!15;UBERON:0000483!9.19e-08!309;UBERON:0000119!9.98e-08!312;UBERON:0002420!3.18e-07!9;UBERON:0007245!3.18e-07!9;UBERON:0010009!3.18e-07!9;UBERON:0010011!3.18e-07!9;UBERON:0000454!3.18e-07!9;UBERON:0002308!5.32e-07!9;UBERON:0000125!5.32e-07!9;UBERON:0001894!7.91e-07!7;UBERON:0006222!7.91e-07!7 | |||
|ontology_enrichment_uberon_v019=UBERON:0000073;5.98e-26;53!UBERON:0002616;5.98e-26;53!UBERON:0002619;1.46e-23;22!UBERON:0002780;3.60e-23;41!UBERON:0001890;3.60e-23;41!UBERON:0000956;1.09e-20;25!UBERON:0000203;1.09e-20;25!UBERON:0001950;1.56e-20;20!UBERON:0003528;1.74e-19;34!UBERON:0002020;1.74e-19;34!UBERON:0001893;3.80e-19;34!UBERON:0000200;5.02e-19;6!UBERON:0002298;5.02e-19;6!UBERON:0001869;6.09e-18;32!UBERON:0002791;6.80e-18;32!UBERON:0003296;1.37e-17;4!UBERON:0010133;1.37e-17;4!UBERON:0001894;2.07e-17;7!UBERON:0000007;3.29e-16;2!UBERON:0000955;4.87e-16;68!UBERON:0001016;1.49e-13;83!UBERON:0001017;2.63e-13;75!UBERON:0000988;2.26e-10;3!UBERON:0001896;2.26e-10;3!UBERON:0001870;2.26e-10;3!UBERON:0005290;2.26e-10;3!UBERON:0004733;1.31e-09;12!UBERON:0002028;1.31e-09;12!UBERON:0004732;7.00e-09;13!UBERON:0002581;2.12e-08;1!UBERON:0002022;2.12e-08;1!UBERON:0002038;2.12e-08;1!UBERON:0009661;2.12e-08;1!UBERON:0002950;2.12e-08;1!UBERON:0007190;2.12e-08;1!UBERON:0001891;2.12e-08;1!UBERON:0002784;2.21e-08;4!UBERON:0007023;5.98e-08;114 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,1.59e-46,56;UBERON:0005068,1.59e-46,56;UBERON:0006241,1.59e-46,56;UBERON:0007135,1.59e-46,56;UBERON:0000073,3.19e-44,53;UBERON:0002616,3.19e-44,53;UBERON:0000955,4.18e-37,68;UBERON:0006238,4.18e-37,68;UBERON:0002780,7.57e-36,41;UBERON:0001890,7.57e-36,41;UBERON:0003080,7.57e-36,41;UBERON:0006240,7.57e-36,41;UBERON:0003075,2.92e-34,82;UBERON:0007284,2.92e-34,82;UBERON:0001017,3.63e-34,81;UBERON:0002346,1.65e-32,86;UBERON:0001016,1.90e-30,89;UBERON:0003056,8.14e-27,61;UBERON:0010371,2.83e-26,104;UBERON:0002619,7.39e-24,22;UBERON:0007023,7.98e-24,114;UBERON:0001893,9.79e-23,34;UBERON:0003528,1.24e-22,34;UBERON:0002020,1.24e-22,34;UBERON:0000956,5.99e-21,25;UBERON:0000203,5.99e-21,25;UBERON:0001950,8.74e-21,20;UBERON:0001869,4.78e-20,32;UBERON:0002791,5.78e-20,32;UBERON:0010314,6.39e-20,132;UBERON:0000200,3.62e-19,6;UBERON:0002298,1.12e-18,6;UBERON:0003296,1.27e-17,4;UBERON:0010133,1.27e-17,4;UBERON:0001894,1.76e-17,7;UBERON:0006222,1.76e-17,7;UBERON:0000007,3.30e-16,2;UBERON:0004121,6.17e-16,171;UBERON:0000924,6.17e-16,171;UBERON:0006601,6.17e-16,171;UBERON:0003076,1.48e-11,15;UBERON:0003057,1.48e-11,15;UBERON:0011216,3.05e-11,223;UBERON:0000025,4.36e-11,192;UBERON:0001870,1.55e-10,3;UBERON:0001896,3.16e-10,3;UBERON:0005290,3.16e-10,3;UBERON:0010096,3.16e-10,3;UBERON:0000988,3.64e-10,3;UBERON:0004733,1.93e-09,12;UBERON:0002028,1.93e-09,12;UBERON:0007277,1.93e-09,12;UBERON:0004732,1.00e-08,13;UBERON:0007190,1.59e-08,1;UBERON:0002784,1.91e-08,4;UBERON:0002022,1.98e-08,1;UBERON:0002038,3.06e-08,1;UBERON:0009661,3.06e-08,1;UBERON:0002950,3.06e-08,1;UBERON:0001891,3.06e-08,1;UBERON:0009616,3.06e-08,1;UBERON:0010286,3.06e-08,1;UBERON:0000483,3.63e-08,306;UBERON:0002581,3.79e-08,1;UBERON:0004111,4.07e-08,240;UBERON:0000119,4.80e-08,309 | |||
|phase1_expression=0,0.214100523890983,0.281908808191942,0,0,0,0,0,0.522371256399677,0.245733936501509,0,0.218441372130172,0,0.247532705920093,0.662794751455832,0,0,0,0,0.246242116153576,0.204000691244253,0.313454721478088,0,0,0.125542639594803,0.152826811495903,0.164201178899891,0.393553906568396,0,0.383829398097213,0.154816123316076,0,0,0,0.46480320348181,0.853015394924529,0,0,0,0.217010870715852,0,0.32389366601898,0,0.145398238779565,0,0,0,0.411167888021826,0,0,0,0.236482229888585,0,0,0,0.376484679085209,0,0,0,0,0,0.329851300186716,0,0.426224750532694,0,0,0.622822248995575,0,0,0,0,0,0,0,0,0,0,0,0,0.285012743741249,0,0,0,0,0,0,0,0,0,0,0,0,0.764546456250458,0,0,0,0.983548850569165,0.393010762749165,0.411202997999018,0,0.651844533267181,0,0,0,0,0.221533894583621,0.270803863765016,0,0,0,0,0,0.296573126324121,0.267540828089713,0,0,1.91610246800961,0.68725489096526,0.253019692019503,0.318565414324097,0,0,0.150575119077773,0,0,0.236777252044017,0,0.201606743224732,0.267440195783507,0.144824403882799,0,0,0,0,0,0,0,0,0.567208902984407,0.221729397462564,0.175669571386252,0.261958150995425,0,0,0,0,0,0,0,0,0.198762407366705,0.860234595106124,0,0,0,0,0,0,0,0.33472061276467,0,0,0,0.367663080345869,0,0.0892997282840798,0,0,0,0,0,0,0,0,0,0,0.264818361626438,0,0,0,0,0,0,0.134710672069688,0,0.756787138224657,0,0,0,0,0,0,0,0.421352420106746,0,0.122834317311768,0.103325781175765,0,0,0,0,0.336672227908132,0.125118519871964,0.277064115484183,0,0,0,0,0.179389635688862,0.427114777637135,0.211931901159562,0,0.515262646192195,0.257640540045629,0,0.337552664482532,0.292311015483596,0,0,0,0,0.10075209822764,0.339121184620975,0,0.272746120590835,0,0,0.265059536642971,0.116193942869518,0.310983165046111,0.252320850875628,0.36497735907583,0,0,0,0,0,0.118306800039844,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245976877086227,0.171567810298526,0,0,0.100528972411631,0.462942225792648,0,2.07986957055916,0,0.579652024875384,0.117408694235822,0,0,0.380508304469197,0,0,0,0,0,0,0,0,0,0,0.383382679165211,0,0.088048434013226,0,0,0,0,0,1.17217447210047,0,0.205654985406647,0,0.285826432630578,0.112131084345361,0,0.07333828582095,0,0,0,0.531876233169741,0,0.257207374262142,0,0,0.285955987316295,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.289562613335158,0,0.358121926479791,0.336255431980582,0.394061520403854,0.431255149719035,1.15508732651774,0,0,0,0.335032530668698,0,0,0,0,0.736148950314839,0.500170521059677,0,0,0,0,0,0,0,0,0.664225598535437,0,0,0.587403472388222,0.343143423810856,0,0,0,0,0,0,0.248107807818777,0,0,0.128139149255701,0.511707249066704,0,0,0.154209693802656,0,0,0,0.116210378459959,0.362578348774867,0,0.184161977871793,0,0.364182336013434,0.393373244878272,0,0.15403067420883,0.784349769176855,0,0.105551628892876,0,0,0.215915916102139,0,0,0,0,0,0,0,0,0,0.328014645699706,0.325378394664303,0,0.183138929636687,0.082509499920588,0,0,0,0,0.154048617114644,0.15350367472613,0,0.966782203814463,0.435050081742686,0.340906509664404,0.267096106940212,0,0.192190067365106,2.16941611240793,0.2023155617111,0,0.31481234683064,0.6970372701606,0,0,0,0,0.143124886741991,0,0.316379424718726,0.190630193923825,0,0,0,0,0.179872457583315,0.54907405947211,0.235624804691373,0,0,0,0.48763373908959,0,0,0.272999822815972,0.141405431953713,0,0.551365343546124,0,0,0,0,0,0.30982349809975,0,0.430234056612155,0,0,0,0,0.329294892959902,0,0.349934720244983,0.0962221127255121,0,0,0.282431402330337,0.86101074534246,0,0,0.229723400206959,0,0,0,0,0,0,0,0,0.106824071127473,0,0.245040215981032,0.185803175125719,0.28853842595289,0.711418433484141,0.318852545457645,0,0,0.423347165447766,0,0,0,0.156679895773023,0,0,0,0,0,0,0,0.223676107892416,0.166849141711909,0.19538809540204,0,0,0,0,0,0,0,0.121360521749513,0.222886768554957,0,0,0.296964680832639,0.307160702099232,1.9882952955326,0.562677665642051,0.779160935160341,0.16480387422676,0.211125408127993,0,0,1.0077309914171,0,0.246169610922139,0,0.269605053441981,0,0,0,0,0,0,1.20598527610407,0,0,0.262379999988587,0,0,0,0,2.06846023944879,0.583209226766509,0.173624994933292,0.885741385813839,0.964771509003264,0,0.663475559587348,0.295547618953547,0.438770794307945,0,0,0.153900517007594,0.227884111694002,0.23056390438806,0.0897576444097721,0.108647371922008,0,0.0915975934018623,0,0,0.156980256395025,0,0.225595660617181,0,0,0,0,0.421996129056054,0.489698424477443,0,0.432777279484182,0,0.176915129006678,0.611030144933625,0.593042257361244,0.123563938946503,0.208843899010911,0.471807930864739,0.802577647298789,0.702793337176017,0,0,0,0.394584402849391,0,0.30607276163049,0,0.150323419414493,0,0,0,0.313932918407225,0,0,0,0,0,0,0,0,0.290268993867255,0.292357268344742,0.328461828212837,0,0,0.451961481561065,0.137041924646751,0.596143835108969,1.51945910294109,0,0.320635281006135,0.213452994739353,0,0.144090417154106,0.114536596165916,0.171594997861965,0.576219191952599,0.124252535565433,0,0.271808412147228,0.104602846312333,0.101998217636322,0,0.600420288709789,0.273810757783986,0,0,0,0.279282401272254,0.229160424011684,0,0.399358000997982,0,0,0.134366944973453,0,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| |||
|short_description=p5@KCTD16 | |||
}} |
Revision as of 08:03, 22 January 2014
Short description: | p5@KCTD16 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_KCTD16_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_NM_020768, uc003lnm.1_5end |
EntrezGene: | KCTD16 |
HGNC: | 29244 |
UniProt: | A8K8W2Q68DU8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CD4-positive, alpha-beta thymocyte | 1.18e-08 | 1 |
naive thymus-derived CD4-positive, alpha-beta T cell | 1.18e-08 | 1 |
mature CD4 single-positive thymocyte | 1.18e-08 | 1 |
resting double-positive thymocyte | 1.18e-08 | 1 |
double-positive blast | 1.18e-08 | 1 |
CD69-positive double-positive thymocyte | 1.18e-08 | 1 |
CD69-positive, CD4-positive single-positive thymocyte | 1.18e-08 | 1 |
CD4-positive, CD8-intermediate double-positive thymocyte | 1.18e-08 | 1 |
CD24-positive, CD4 single-positive thymocyte | 1.18e-08 | 1 |