FFCP PHASE1:Hg19::chr9:103235584..103235650,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=8577 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11866 | |||
|TSSclassifier=strong | |||
|UniProt=Q8IYR6 | |||
|association_with_transcript=64bp_to_NM_003692_5end | |||
|coexpression_cluster_id=C10 | |||
|description=CAGE_peak_2_at_TMEFF1_5end | |||
|id=chr9:103235584..103235650,+ | |||
|ontology_enrichment_celltype=CL:0002319!1.18e-08!25;CL:0002139!1.13e-07!24 | |||
|ontology_enrichment_celltype_v019=CL:0002319;1.65e-10;25!CL:0000540;3.96e-08;6!CL:0000404;3.96e-08;6!CL:0002321;1.19e-07;15 | |||
|ontology_enrichment_celltype_v019_2=CL:0002319,1.54e-10,25;CL:0000047,2.37e-10,8;CL:0000540,3.86e-08,6;CL:0000031,3.86e-08,6;CL:0000404,3.86e-08,6;CL:0000133,2.72e-07,59 | |||
|ontology_enrichment_development_v019=UBERON:0006601;5.88e-14;82!CL:0000031;3.96e-08;6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!2.81e-38!94;UBERON:0001016!2.81e-38!94;UBERON:0001017!1.27e-35!82;UBERON:0005743!1.78e-35!86;UBERON:0001049!3.27e-30!57;UBERON:0005068!3.27e-30!57;UBERON:0006241!3.27e-30!57;UBERON:0007135!3.27e-30!57;UBERON:0002346!2.85e-29!90;UBERON:0003075!9.97e-28!86;UBERON:0007284!9.97e-28!86;UBERON:0000955!1.15e-27!69;UBERON:0006238!1.15e-27!69;UBERON:0002780!6.44e-25!41;UBERON:0001890!6.44e-25!41;UBERON:0006240!6.44e-25!41;UBERON:0001893!1.84e-24!34;UBERON:0002020!2.40e-24!34;UBERON:0003528!2.40e-24!34;UBERON:0000924!2.57e-24!173;UBERON:0006601!2.57e-24!173;UBERON:0002616!2.82e-24!59;UBERON:0003080!9.10e-24!42;UBERON:0002791!1.02e-23!33;UBERON:0001869!3.46e-23!32;UBERON:0003056!3.91e-23!61;UBERON:0004121!6.54e-23!169;UBERON:0000033!1.99e-20!123;UBERON:0000153!1.12e-19!129;UBERON:0007811!1.12e-19!129;UBERON:0000956!2.69e-18!25;UBERON:0000203!2.69e-18!25;UBERON:0002619!5.35e-17!22;UBERON:0000025!6.03e-17!194;UBERON:0000119!3.73e-16!312;UBERON:0000483!1.03e-15!309;UBERON:0001950!1.21e-15!20;UBERON:0004111!1.07e-12!241;UBERON:0000477!5.41e-11!286;UBERON:0000475!1.44e-10!365;UBERON:0007023!2.69e-09!115;UBERON:0000064!2.89e-09!219;UBERON:0000922!4.29e-09!612;UBERON:0000468!2.30e-08!659;UBERON:0003076!1.27e-07!15;UBERON:0003057!1.27e-07!15;UBERON:0002420!1.59e-07!9;UBERON:0007245!1.59e-07!9;UBERON:0010009!1.59e-07!9;UBERON:0010011!1.59e-07!9;UBERON:0000454!1.59e-07!9;UBERON:0002308!1.74e-07!9;UBERON:0000125!1.74e-07!9;UBERON:0002050!3.69e-07!605;UBERON:0005423!3.69e-07!605;UBERON:0000923!6.48e-07!604;UBERON:0005291!6.48e-07!604;UBERON:0006598!6.48e-07!604;UBERON:0002532!6.48e-07!604 | |||
|ontology_enrichment_uberon_v019=UBERON:0001869;5.78e-36;32!UBERON:0001893;5.99e-36;34!UBERON:0003528;8.37e-36;34!UBERON:0002020;8.37e-36;34!UBERON:0002791;9.08e-36;32!UBERON:0000956;6.26e-31;25!UBERON:0000203;6.26e-31;25!UBERON:0002619;9.02e-29;22!UBERON:0002780;1.41e-28;41!UBERON:0001890;1.41e-28;41!UBERON:0001950;2.12e-26;20!UBERON:0000073;1.53e-25;53!UBERON:0002616;1.53e-25;53!UBERON:0001016;7.54e-20;83!UBERON:0000955;9.64e-20;68!UBERON:0001017;1.85e-19;75!UBERON:0002420;4.45e-12;9!UBERON:0007245;4.45e-12;9!UBERON:0010009;4.45e-12;9!UBERON:0010011;4.45e-12;9!UBERON:0000454;4.45e-12;9!UBERON:0000125;5.13e-12;9!UBERON:0002308;5.13e-12;9!UBERON:0009663;8.50e-10;7!UBERON:0001871;2.24e-09;6!UBERON:0000200;9.06e-09;6!UBERON:0004732;2.95e-08;13!UBERON:0002298;3.82e-08;6!UBERON:0001872;8.56e-08;5!UBERON:0002021;1.28e-07;5!UBERON:0000349;1.52e-07;5!UBERON:0011216;1.55e-07;132!UBERON:0004733;4.12e-07;12!UBERON:0002028;4.12e-07;12!UBERON:0000922;8.63e-07;49 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,1.38e-59,89;UBERON:0001017,4.28e-56,81;UBERON:0001049,9.93e-49,56;UBERON:0005068,9.93e-49,56;UBERON:0006241,9.93e-49,56;UBERON:0007135,9.93e-49,56;UBERON:0000073,2.59e-45,53;UBERON:0002616,2.59e-45,53;UBERON:0000955,1.95e-43,68;UBERON:0006238,1.95e-43,68;UBERON:0001893,4.89e-42,34;UBERON:0002346,5.18e-42,86;UBERON:0003528,7.81e-42,34;UBERON:0002020,7.81e-42,34;UBERON:0003075,9.69e-42,82;UBERON:0007284,9.69e-42,82;UBERON:0002780,8.71e-40,41;UBERON:0001890,8.71e-40,41;UBERON:0003080,8.71e-40,41;UBERON:0006240,8.71e-40,41;UBERON:0001869,8.88e-40,32;UBERON:0002791,1.64e-39,32;UBERON:0004121,5.06e-36,171;UBERON:0000924,5.06e-36,171;UBERON:0006601,5.06e-36,171;UBERON:0003056,2.93e-34,61;UBERON:0010371,9.22e-34,104;UBERON:0000956,4.16e-31,25;UBERON:0000203,4.16e-31,25;UBERON:0002619,8.33e-29,22;UBERON:0001950,2.09e-26,20;UBERON:0010314,2.27e-23,132;UBERON:0011216,3.24e-22,223;UBERON:0000025,5.86e-15,192;UBERON:0007023,2.10e-14,114;UBERON:0004111,8.04e-13,240;UBERON:0002420,4.41e-12,9;UBERON:0007245,4.41e-12,9;UBERON:0010009,4.41e-12,9;UBERON:0010011,4.41e-12,9;UBERON:0000454,4.41e-12,9;UBERON:0000125,5.15e-12,9;UBERON:0002308,5.15e-12,9;UBERON:0003076,3.78e-10,15;UBERON:0003057,3.78e-10,15;UBERON:0009663,8.61e-10,7;UBERON:0000483,1.09e-09,306;UBERON:0001871,2.20e-09,6;UBERON:0000119,2.25e-09,309;UBERON:0000922,4.45e-09,592;UBERON:0000200,8.41e-09,6;UBERON:0004732,2.42e-08,13;UBERON:0002298,3.62e-08,6;UBERON:0001872,8.88e-08,5;UBERON:0002021,1.29e-07,5;UBERON:0000349,1.40e-07,5;UBERON:0004733,3.42e-07,12;UBERON:0002028,3.42e-07,12;UBERON:0007277,3.42e-07,12 | |||
|phase1_expression=0,0,0.422863212287913,0,0.446961094427288,0,0,0.631719873426831,0,0.245733936501509,0,0,0.263766978228454,0.123766352960047,0,2.01697543935533,0.602694528023977,2.19093027116212,0.975865597581014,0.61560529038394,0,1.25381888591235,2.86235987131057,2.18999080116615,1.75759695432724,0,0,0,0,0,0,0,0,0,0,3.41206157969812,0.293600439334847,0,0,0,0,0,0,0.145398238779565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.34140171940727,0.255725123687061,0.361439152384566,0,0,0,0,0.661743720148475,1.77383517970051,0.790513071238134,2.0956652079634,0,0,0,0,0,0,0,0,0.79504962946682,1.72046919021225,0.694281003215189,1.13061588384802,0.419499436209906,1.37559020970034,1.04497483268405,4.65150166504792,2.13459757612026,2.34304428935269,1.20848795132744,0.760272105718513,2.19655851793353,1.83831540172934,0.81014194788176,0.714397826272638,0.44905874525234,0.675668882899933,3.06633274931766,0.949265659568129,3.48083313467774,0,0,0,0,0.886413581652058,0,0.860509862246441,1.06400514659507,0,0,0,0.311211035399766,0.538842688278752,0.326923806226917,0,0,0.234321431833797,0,1.1409436430889,0,0.822041490506354,0.809364721840658,1.68540968042698,0,0.122834317311768,0.103325781175765,1.18800285728205,0.741800787835671,0,0,1.0100166837244,0.750711119231785,0,0.438977620880838,0,0.45071417671979,0.226864366320042,0.179389635688862,0.213557388818567,0.211931901159562,0,0.309157587715317,0,0.18611685633159,0.168776332241266,0.584622030967192,0,0.184099797284599,1.93975268182574,0.355009592516614,0.201504196455281,0,0.386521706326594,0,0,2.43947412259191,4.10842281796604,3.48581828608555,7.46359596110667,4.03713361401005,4.37972830890996,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.21446636387394,1.40241773803446,0,0,0,0,0.590789906681404,0.882926198829301,0.491953754172454,1.3725424823882,0,0,0.100528972411631,0.0925884451585296,0,0,1.44331342025273,2.66639931442677,0.70445216541493,0.433099343283221,0,1.14152491340759,0,0,0,0,0,0,0,0,0,0,0.383382679165211,0,0,0,0,0,0.253991577168676,0,0,0,0,0,0.285826432630578,0.224262168690721,0.87192013766656,0.4400297149257,0.646358578788889,0,0.845302752556,0.797814349754612,0,0.514414748524284,0,0,0,0,0,0,0,0,0.301439377059586,0,0.099972991182057,0,0,0,0.479249710983165,1.14861935834114,0,0.144781306667579,0,0.179060963239896,0,0,0,0.128343036279748,3.04913549066956,29.932166387253,13.1459098172208,28.4777651068393,19.1381625495949,0,0,0,0.12269149171914,0,0.542530047399471,0.415941723061614,0.356857977594324,0,0,0.300946099727719,0,1.03473071292505,0.664225598535437,0,0.0868836144680828,0,1.02943027143257,0,0,0,0.303127571446259,0,0.30239029332968,0,0.153461973288062,0,0.256278298511402,0,0.321707842287215,0,0.154209693802656,0.177561725313127,0.246381468041427,0.519254429183621,0.116210378459959,0.483437798366489,0,0,0,0,0,0.451199612907412,1.15523005656622,0,0,0.73886140225013,1.13733384070897,0.850468526382578,0.215915916102139,0,0,0,0,0,0.223874754722178,0,0,0.512900250232778,0,0.976135183992909,0.103041011647722,1.73981983154852,1.23764249880882,0,0,0,0.676695028044854,0.154048617114644,0.307007349452259,0.275673144969061,0.214840489736547,0.580066775656914,0.596586391912706,0.623224249527161,0,0,0,0,0.929691098594572,1.25924938732256,0,0.924100740528266,0,0.869932992075073,0.55597265731176,0.286249773483982,0,0.316379424718726,0,0.511795582622668,0.855877976067841,0,1.56989728039846,0.179872457583315,0.54907405947211,0.235624804691373,0.202182481573316,0,0.421258456238981,0,0.487426979262569,0,0,0.282810863907425,1.13008116620243,1.10273068709225,0,0,0,0,0,0.6196469961995,0.281695602532241,0.286822704408103,0.294747123039363,0,0,0,0.658589785919804,0.75894634753143,0.349934720244983,0,0,0,0,0,0,0,0.229723400206959,0,0.764637207142375,0,0,0,0,0,0.79312517629427,2.13648142254946,5.77487913158015,0,0.185803175125719,2.16403819464667,1.42283686696828,1.75368900001705,0,0.191505370132367,0,0,0.280797178113459,0,0,0,0.169291777801603,0,0,0,2.40453741329035,0,0,0.166849141711909,0,0,0,0,0.33307196799782,0,0,0,0.849523652246594,0,0,0,0,0,15.9063623642608,6.47079315488359,0.222617410045812,0,6.75601306009579,0.398495976502139,0.552567831062295,0.251932747854276,0.409074730008619,0.123084805461069,0.311039587661807,0,0,0,0,0,0,16.4786566836187,12.7092294481736,35.930483640215,0,0,0,0.227586896570999,0,0,5.17115059862197,2.33283690706603,8.85487474159791,25.6865001886013,8.20055782652774,1.52581736317083,0.995213339381022,4.72876190325676,16.01513399224,0.21787692703798,0.139423744278603,0.307801034015188,0.227884111694002,0.23056390438806,1.07709173291727,0.217294743844016,0,0,0,0,0,0.166211681900156,0.225595660617181,0,0,0,0,2.53197677433632,0.816164040795739,0,2.59666367690509,0,0.265372693510018,2.4441205797345,0,0.123563938946503,0.104421949505455,10.851582409889,0.802577647298789,16.1642467550484,0.364909578431332,0.19566461893209,0.485560759068186,0,1.20990716048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|short_description=p2@TMEFF1 | |||
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Revision as of 02:30, 23 January 2014
Short description: | p2@TMEFF1 |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_TMEFF1_5end |
Coexpression cluster: | C10_occipital_temporal_parietal_brain_duodenum_Neurons_Neural |
Association with transcript: | 64bp_to_NM_003692_5end |
EntrezGene: | TMEFF1 |
HGNC: | 11866 |
UniProt: | Q8IYR6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neural cell | 1.54e-10 | 25 |
neuronal stem cell | 2.37e-10 | 8 |
neuron | 3.86e-08 | 6 |
neuroblast | 3.86e-08 | 6 |
electrically signaling cell | 3.86e-08 | 6 |
neurectodermal cell | 2.72e-07 | 59 |