FFCP PHASE1:Hg19::chrX:31285018..31285028,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=1756 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=2928 | |||
|TSSclassifier=strong | |||
|UniProt=E9PDN1,Q6NSJ9,Q8N754,P11532,Q16484 | |||
|association_with_transcript=0bp_to_ENST00000361471,NM_004015,NM_004016,NM_004017,NM_004018,NM_004019,uc004dcm.1,uc004dcn.1,uc004dco.1,uc004dcp.1,uc010ngm.2,uc011mkb.1_5end | |||
|coexpression_cluster_id=C4870 | |||
|description=CAGE_peak_9_at_DMD_5end | |||
|id=chrX:31285018..31285028,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0002195;8.12e-09;2!CL:0002549;8.12e-09;2!CL:0002571;8.12e-09;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002195,7.02e-09,2;CL:0002571,7.02e-09,2;CL:0002549,8.49e-09,2 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!8.93e-24!82;UBERON:0007023!1.95e-23!115;UBERON:0005743!6.26e-23!86;UBERON:0000955!9.28e-23!69;UBERON:0006238!9.28e-23!69;UBERON:0002616!1.91e-21!59;UBERON:0000073!1.47e-19!94;UBERON:0001016!1.47e-19!94;UBERON:0001049!1.70e-19!57;UBERON:0005068!1.70e-19!57;UBERON:0006241!1.70e-19!57;UBERON:0007135!1.70e-19!57;UBERON:0002780!1.20e-16!41;UBERON:0001890!1.20e-16!41;UBERON:0006240!1.20e-16!41;UBERON:0000153!3.53e-16!129;UBERON:0007811!3.53e-16!129;UBERON:0003080!5.79e-16!42;UBERON:0003075!6.96e-16!86;UBERON:0007284!6.96e-16!86;UBERON:0000033!1.48e-15!123;UBERON:0002346!2.26e-14!90;UBERON:0001893!3.46e-14!34;UBERON:0002020!6.65e-14!34;UBERON:0003528!6.65e-14!34;UBERON:0003056!9.68e-14!61;UBERON:0002791!2.04e-13!33;UBERON:0001869!2.71e-13!32;UBERON:0004121!1.44e-12!169;UBERON:0000924!9.90e-12!173;UBERON:0006601!9.90e-12!173;UBERON:0000477!3.18e-11!286;UBERON:0000475!2.09e-08!365;UBERON:0000956!2.17e-08!25;UBERON:0000203!2.17e-08!25;UBERON:0002619!2.68e-08!22;UBERON:0001950!2.81e-08!20;UBERON:0000062!3.25e-08!511;UBERON:0002308!1.22e-07!9;UBERON:0000125!1.22e-07!9;UBERON:0000481!1.40e-07!347 | |||
|ontology_enrichment_uberon_v019=UBERON:0001869;9.70e-22;32!UBERON:0001893;2.11e-19;34!UBERON:0002791;8.47e-19;32!UBERON:0001950;5.05e-18;20!UBERON:0003528;7.01e-17;34!UBERON:0002020;7.01e-17;34!UBERON:0002619;2.94e-16;22!UBERON:0000956;4.04e-14;25!UBERON:0000203;4.04e-14;25!UBERON:0001017;4.81e-14;75!UBERON:0005284;5.52e-13;5!UBERON:0002780;2.53e-12;41!UBERON:0001890;2.53e-12;41!UBERON:0006876;3.61e-12;11!UBERON:0000955;2.21e-10;68!UBERON:0002420;8.00e-10;9!UBERON:0007245;8.00e-10;9!UBERON:0010009;8.00e-10;9!UBERON:0010011;8.00e-10;9!UBERON:0000454;8.00e-10;9!UBERON:0000200;1.30e-09;6!UBERON:0005629;8.12e-09;2!UBERON:0005358;8.12e-09;2!UBERON:0001886;8.12e-09;2!UBERON:0004086;8.12e-09;2!UBERON:0005282;8.12e-09;2!UBERON:0005281;8.12e-09;2!UBERON:0000369;8.43e-09;4!UBERON:0002435;8.43e-09;4!UBERON:0005904;8.43e-09;4!UBERON:0000204;8.43e-09;4!UBERON:0009663;1.86e-08;7!UBERON:0001871;3.02e-08;6!UBERON:0001016;7.08e-08;83 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000955,4.29e-24,68;UBERON:0006238,4.29e-24,68;UBERON:0001869,1.39e-23,32;UBERON:0001893,5.15e-22,34;UBERON:0001017,3.29e-21,81;UBERON:0002791,1.38e-20,32;UBERON:0003528,3.30e-19,34;UBERON:0002020,3.30e-19,34;UBERON:0001016,1.61e-18,89;UBERON:0003056,3.65e-18,61;UBERON:0001950,4.78e-18,20;UBERON:0002780,1.04e-17,41;UBERON:0001890,1.04e-17,41;UBERON:0003080,1.04e-17,41;UBERON:0006240,1.04e-17,41;UBERON:0002619,2.80e-16,22;UBERON:0000956,3.87e-14,25;UBERON:0000203,3.87e-14,25;UBERON:0003075,8.56e-14,82;UBERON:0007284,8.56e-14,82;UBERON:0001049,8.85e-14,56;UBERON:0005068,8.85e-14,56;UBERON:0006241,8.85e-14,56;UBERON:0007135,8.85e-14,56;UBERON:0004121,1.37e-13,171;UBERON:0000924,1.37e-13,171;UBERON:0006601,1.37e-13,171;UBERON:0005284,5.75e-13,5;UBERON:0000073,6.06e-13,53;UBERON:0002616,6.06e-13,53;UBERON:0002346,6.28e-13,86;UBERON:0006876,2.96e-12,11;UBERON:0007023,3.58e-12,114;UBERON:0010314,1.08e-11,132;UBERON:0011216,3.45e-10,223;UBERON:0002420,6.46e-10,9;UBERON:0007245,6.46e-10,9;UBERON:0010009,6.46e-10,9;UBERON:0010011,6.46e-10,9;UBERON:0000454,6.46e-10,9;UBERON:0010371,7.18e-10,104;UBERON:0000200,1.94e-09,6;UBERON:0005904,4.87e-09,4;UBERON:0000369,7.12e-09,4;UBERON:0002435,7.12e-09,4;UBERON:0000204,7.12e-09,4;UBERON:0010082,7.12e-09,4;UBERON:0005629,8.49e-09,2;UBERON:0005358,8.49e-09,2;UBERON:0001886,8.49e-09,2;UBERON:0004086,8.49e-09,2;UBERON:0005282,8.49e-09,2;UBERON:0005281,8.49e-09,2;UBERON:0009663,2.05e-08,7;UBERON:0001871,2.35e-08,6 | |||
|phase1_expression=0.363356758541113,0.428201047781966,0.140954404095971,0,0.446961094427288,0,0,0,0,0.245733936501509,0,0,0,0,0,0,0,0,0,0.123121058076788,0,0,0,0.136874425072884,0.376627918784408,0.152826811495903,0,0.157421562627358,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150575119077773,0,0,0,0,0,0,0,0,0,1.15076305659177,0,0,0,0,0.486634870302636,0.567208902984407,1.77383517970051,2.28370442802128,0.458426764241994,0,0,0,0,0,0.238490624305342,0,0.74291500265913,0,0,0,0,0,0,0,0,0,0.66944122552934,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.993943903390637,0.12663051166458,0.529636723252875,0,0,1.68203280042692,0,0.98667019366864,1.55605517699883,0,0,2.72443369760877,2.30470369792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.277064115484183,0,0,0.45071417671979,0.226864366320042,0,0,0,0,0,1.54584324027377,1.48893485065272,0,0,0,0,0,0,0.10075209822764,0,0,0.272746120590835,0,0,0.265059536642971,0,0.10366105501537,0.252320850875628,0,0,0,0,0,0,0.354920400119532,0.505754070234305,1.20505514941741,0.55146986366197,0.435758888184812,0,0.269662616320329,0.392442930250692,0,0,0,0,0,0,0,0.590789906681404,0,0.491953754172454,0.171567810298526,0.439001141634502,0,0,0,0.325808305310325,0,0,0,9.7449216215732,0,0,0,0,0,0,0,0,0,0.335964256397719,0,0.0895585227028483,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.560655421726804,0.87192013766656,0.22001485746285,0.517086863031111,0,0,0,1.04007436911366,0,0,0,2.57360388584666,0,0,0,2.84313558994037,0,0.301439377059586,0,0.499864955910285,0,0,0,0.718874566474748,0,0,0.144781306667579,0,0,0,0,0,0,0.508189248444927,0,0,0,0.637938751653163,0,0,0,0,0,0,0,0.178428988797162,0.473107245101804,0.234282829985426,0.300946099727719,0,0,0,0,0,0,0.343143423810856,0,0,0,0,0,0,0.496215615637554,0,0,0.128139149255701,1.02341449813341,0.160853921143607,0,0.154209693802656,0,0,0,0,0.120859449591622,0.200506470303285,0.0920809889358963,0.114814448164607,0.182091168006717,0,0,0,0,0,0,0,0,0.647747748306418,0,0,0,0,0,0,0,0,0,0,0,0.618246069886334,0,0,0.574265537996172,0,1.6068392984416,0,0,0,0,0,0,0.0852266274161009,0.267096106940212,0.165284915360978,0,0.510450849978337,0.10115778085555,0,0,0,0,0,0,0.18532421910392,0.429374660225974,4.46590043231601,3.79655309662471,0.571890581771475,0,0,0,0,0,0,0.235624804691373,0,0,0,0,0,0,1.09199929126389,0.141405431953713,0,0,0.66343897524122,0,0,0,0,0.30982349809975,0,0,0.392996164052485,0,0,0,0,0,0,0,0,0,0.941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0.427296284509893,0,0,0,0,0,0,0,0.191505370132367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0.111443384277478,0,0.23874448473769,0,0.614321404198464,0,1.82870241333667,0,0,0,0.398495976502139,0.828851746593443,0,0,0,0.622079175323615,0,0,0,1.57829449019094,0,0,2.90799823828566,0.556608588971108,1.99613798001194,0,0,0,0,0,0,0,0,0,0.885741385813839,1.4471572635049,0,0.110579259931225,0.591095237907095,0.87754158861589,0.32681539055697,0.278847488557207,0.230850775511391,0.797594390929008,0,0,0.108647371922008,0,0.366390373607449,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.265372693510018,0,0,0.247127877893006,0.104421949505455,0.741412462787447,0,0.468528891450678,0,0.19566461893209,0,1.97292201424695,1.20990716048664,0,0.63186579628488,0.150323419414493,0,0.664653872707185,0,0,0,0,0,0,0,0.174118413160805,0.17472666824203,0,0.580537987734511,0.950161122120412,0.328461828212837,0.0969890164884194,2.55942767405351,0.677942222341597,0,0,1.39283751102933,0,0,4.4825128895264,0.19980960958213,0,0.114536596165916,0,0,0,0.471388069233591,4.34893459435565,3.97490815986866,0,0,1.20084057741958,0.410716136675979,0,1.71906176567983,0,0,0,0,0.199679000498991,0,0,0.806201669840715,0,0,0.315132729228895,0.247247575143499,0.202210631562555,0.295282444544246,0,0,0.817220436669454,0,0,0,0,0,1.45798935979259,0,0.315222829196793,0.209818352539992,0,0,0,0,0,0,0,0,0,0,0,0.170388021785422,0,0.58620893471233,0,0.387848869084652,0.79339561045614,0,0,0,0.78602152549833,0,0.496166021811951,0,0.487170393523584,0,0,0.5013797880454,0.306345576763462,0,0,0,1.22026264901963,1.251909307065,0,0.443716206147409,0.807253238237985,0,0.37494122388632,0.151649117541648,0,0,0,0,0,0.233713309847224,0,0,0.251567901752575,0,0,0,0,0,0.318593534327405,0,0.155262956876259,0,0,0,0,0.761610424337591,0,0.181848659202559,0.214821114084977,0,2.78667122089031,0,0.343395705182793,0,3.78554694685953,0,0,0.260994291965212,0.680117776536817,0.231522474323834,0,0.179088841081487,0.308801447160972,0.219284049578707,0.176689145945881,0.38582807654183,0.168942440653073,0,0.690860683462397,0,0.691292180758654,0,0,0,0,0,0,2.59983614611409,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.318004350653419,0,0,0,0,1.41304295212211,0,1.27707087245721,1.23069818544453,0,0.96820153449905,1.13032951942296,0,0.0981477185010256,0,0.183428598521679,0,0,0,0,0.451261970095544,0,0,0,0,0,1.35075169236789,1.56215619722769,0.413373593002368,0.887821342714695,0,1.09651553371436,0,0,0.127762427639595,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| |||
|short_description=p9@DMD | |||
}} |
Revision as of 05:11, 23 January 2014
Short description: | p9@DMD |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_9_at_DMD_5end |
Coexpression cluster: | C4870_Lens_seminal_gall_Fibroblast_glioblastoma_Smooth_ductus |
Association with transcript: | 0bp_to_ENST00000361471, NM_004015, NM_004016, NM_004017, NM_004018, NM_004019, uc004dcm.1, uc004dcn.1, uc004dco.1, uc004dcp.1, uc010ngm.2, uc011mkb.1_5end |
EntrezGene: | DMD |
HGNC: | 2928 |
UniProt: | E9PDN1Q6NSJ9Q8N754P11532Q16484 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatic stem cell | 7.02e-09 | 2 |
hepatic mesenchymal stem cell | 7.02e-09 | 2 |
fibroblast of choroid plexus | 8.49e-09 | 2 |