FFCP PHASE1:Hg19::chrX:49056640..49056660,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6855 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11506 | |||
|TSSclassifier=strong | |||
|UniProt=G5E9A2,F2Z3E1,P08247,B7Z359 | |||
|association_with_transcript=0bp_to_ENST00000376303,ENST00000466635,ENST00000469389,ENST00000472737,ENST00000479808,ENST00000494396,ENST00000538567,NM_003179,uc004dmz.1,uc004dna.1,uc011mmz.1_5end | |||
|coexpression_cluster_id=C3 | |||
|description=CAGE_peak_1_at_SYP_5end | |||
|id=chrX:49056640..49056660,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;1.17e-14;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:171;2.21e-07;10 | |||
|ontology_enrichment_disease_v019_2=DOID:171,2.39e-07,10 | |||
|ontology_enrichment_uberon=UBERON:0007023!9.07e-40!115;UBERON:0001017!1.55e-32!82;UBERON:0000073!1.77e-32!94;UBERON:0001016!1.77e-32!94;UBERON:0005743!9.11e-32!86;UBERON:0001049!3.41e-30!57;UBERON:0005068!3.41e-30!57;UBERON:0006241!3.41e-30!57;UBERON:0007135!3.41e-30!57;UBERON:0000955!8.71e-26!69;UBERON:0006238!8.71e-26!69;UBERON:0002616!2.54e-25!59;UBERON:0002780!5.55e-25!41;UBERON:0001890!5.55e-25!41;UBERON:0006240!5.55e-25!41;UBERON:0003080!1.23e-23!42;UBERON:0002346!5.55e-23!90;UBERON:0003075!2.73e-21!86;UBERON:0007284!2.73e-21!86;UBERON:0001893!1.46e-20!34;UBERON:0002020!1.56e-20!34;UBERON:0003528!1.56e-20!34;UBERON:0002791!7.29e-20!33;UBERON:0001869!1.56e-19!32;UBERON:0000924!1.02e-16!173;UBERON:0006601!1.02e-16!173;UBERON:0002619!3.64e-16!22;UBERON:0004121!2.23e-15!169;UBERON:0000956!2.62e-15!25;UBERON:0000203!2.62e-15!25;UBERON:0001950!6.68e-15!20;UBERON:0003056!1.45e-13!61;UBERON:0000153!1.22e-11!129;UBERON:0007811!1.22e-11!129;UBERON:0000033!3.41e-11!123;UBERON:0003076!1.01e-07!15;UBERON:0003057!1.01e-07!15;UBERON:0002420!8.53e-07!9;UBERON:0007245!8.53e-07!9;UBERON:0010009!8.53e-07!9;UBERON:0010011!8.53e-07!9;UBERON:0000454!8.53e-07!9 | |||
|ontology_enrichment_uberon_v019=UBERON:0002780;4.20e-23;41!UBERON:0001890;4.20e-23;41!UBERON:0000073;1.06e-22;53!UBERON:0002616;1.06e-22;53!UBERON:0001893;2.68e-22;34!UBERON:0003528;2.99e-22;34!UBERON:0002020;2.99e-22;34!UBERON:0001869;3.15e-22;32!UBERON:0002791;5.60e-22;32!UBERON:0002619;1.37e-21;22!UBERON:0001950;7.40e-20;20!UBERON:0000956;5.48e-19;25!UBERON:0000203;5.48e-19;25!UBERON:0001017;5.96e-16;75!UBERON:0000955;1.48e-15;68!UBERON:0001016;2.03e-15;83!UBERON:0007023;4.52e-14;114!UBERON:0000922;2.43e-09;49!UBERON:0004732;4.05e-09;13!UBERON:0002420;9.53e-09;9!UBERON:0007245;9.53e-09;9!UBERON:0010009;9.53e-09;9!UBERON:0010011;9.53e-09;9!UBERON:0000454;9.53e-09;9!UBERON:0000125;1.33e-08;9!UBERON:0002308;1.33e-08;9!UBERON:0004733;1.98e-08;12!UBERON:0002028;1.98e-08;12!UBERON:0001871;1.60e-07;6!UBERON:0001894;1.85e-07;7!UBERON:0011216;1.93e-07;132!UBERON:0000200;4.85e-07;6!UBERON:0009663;5.68e-07;7 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,2.39e-46,114;UBERON:0001016,5.83e-44,89;UBERON:0001017,1.17e-42,81;UBERON:0001049,1.12e-41,56;UBERON:0005068,1.12e-41,56;UBERON:0006241,1.12e-41,56;UBERON:0007135,1.12e-41,56;UBERON:0000073,2.74e-39,53;UBERON:0002616,2.74e-39,53;UBERON:0002346,7.93e-34,86;UBERON:0000955,1.92e-33,68;UBERON:0006238,1.92e-33,68;UBERON:0002780,4.17e-32,41;UBERON:0001890,4.17e-32,41;UBERON:0003080,4.17e-32,41;UBERON:0006240,4.17e-32,41;UBERON:0003075,1.94e-31,82;UBERON:0007284,1.94e-31,82;UBERON:0001893,4.59e-26,34;UBERON:0003528,5.00e-26,34;UBERON:0002020,5.00e-26,34;UBERON:0004121,1.61e-25,171;UBERON:0000924,1.61e-25,171;UBERON:0006601,1.61e-25,171;UBERON:0011216,3.09e-25,223;UBERON:0010371,4.40e-25,104;UBERON:0001869,1.19e-24,32;UBERON:0002791,2.33e-24,32;UBERON:0002619,1.45e-21,22;UBERON:0003056,2.28e-21,61;UBERON:0001950,7.84e-20,20;UBERON:0000956,6.86e-19,25;UBERON:0000203,6.86e-19,25;UBERON:0010314,4.70e-18,132;UBERON:0003076,1.56e-10,15;UBERON:0003057,1.56e-10,15;UBERON:0004732,4.97e-09,13;UBERON:0002420,9.75e-09,9;UBERON:0007245,9.75e-09,9;UBERON:0010009,9.75e-09,9;UBERON:0010011,9.75e-09,9;UBERON:0000454,9.75e-09,9;UBERON:0000125,1.36e-08,9;UBERON:0002308,1.36e-08,9;UBERON:0004733,2.41e-08,12;UBERON:0002028,2.41e-08,12;UBERON:0007277,2.41e-08,12;UBERON:0001871,1.63e-07,6;UBERON:0001894,1.89e-07,7;UBERON:0006222,1.89e-07,7;UBERON:0000200,4.93e-07,6;UBERON:0000025,5.10e-07,192;UBERON:0009663,5.78e-07,7 | |||
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| |||
|short_description=p1@SYP | |||
}} |
Revision as of 05:41, 23 January 2014
Short description: | p1@SYP |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_SYP_5end |
Coexpression cluster: | C3_occipital_temporal_insula_medial_postcentral_frontal_amygdala |
Association with transcript: | 0bp_to_ENST00000376303, ENST00000466635, ENST00000469389, ENST00000472737, ENST00000479808, ENST00000494396, ENST00000538567, NM_003179, uc004dmz.1, uc004dna.1, uc011mmz.1_5end |
EntrezGene: | SYP |
HGNC: | 11506 |
UniProt: | G5E9A2F2Z3E1P08247B7Z359 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuroectodermal tumor | 2.39e-07 | 10 |