FFCP PHASE1:Mm9::chr3:51028791..51028804,+: Difference between revisions
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{{FFCP|EntrezGene=12457|HGNC=|MCL_coexpression_id=13|UniProt=O35710|association_with_transcript=399bp_to_ENSMUST00000167780_5end|description=CAGE_peak_5_at_Ccrn4l_5end|id=chr3:51028791..51028804,+|ontology_enrichment_celltype=CL:0000117!1.24e-12!23;CL:0000337!1.24e-12!23|ontology_enrichment_celltype_v019_2=CL:0000117,5.78e-21,23;CL:0000337,5.78e-21,23;CL:0000540,6.82e-13,33;CL:0000047,6.82e-13,33;CL:0000031,6.82e-13,33;CL:0000404,6.82e-13,33;CL:0000393,4.43e-10,39;CL:0000211,4.43e-10,39;CL:0002319,9.89e-10,43;CL:0000221,2.19e-09,44;CL:0000133,2.19e-09,44|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001049!3.29e-17!52;UBERON:0005068!3.29e-17!52;UBERON:0006241!3.29e-17!52;UBERON:0007135!3.29e-17!52;UBERON:0002020!1.37e-16!34;UBERON:0000955!7.83e-16!50;UBERON:0006238!7.83e-16!50;UBERON:0002616!1.87e-15!49;UBERON:0001017!4.55e-14!73;UBERON:0005743!4.55e-14!73;UBERON:0002346!9.22e-14!71;UBERON:0003075!9.22e-14!71;UBERON:0007284!9.22e-14!71;UBERON:0000073!1.69e-13!75;UBERON:0001016!1.69e-13!75;UBERON:0002791!1.78e-13!29;UBERON:0003528!1.78e-13!29;UBERON:0001893!1.78e-13!29;UBERON:0000033!3.07e-13!63;UBERON:0003080!2.44e-12!40;UBERON:0004121!3.39e-12!102;UBERON:0000924!3.39e-12!102;UBERON:0006601!3.39e-12!102;UBERON:0002780!1.02e-11!39;UBERON:0001890!1.02e-11!39;UBERON:0006240!1.02e-11!39;UBERON:0003056!1.90e-10!49;UBERON:0000956!6.42e-09!21;UBERON:0001869!6.42e-09!21;UBERON:0000203!6.42e-09!21;UBERON:0002619!3.58e-08!17;UBERON:0002021!2.93e-07!10;UBERON:0000411!2.93e-07!10;UBERON:0001950!2.93e-07!10;UBERON:0007811!4.48e-07!86;UBERON:0000153!5.46e-07!94|ontology_enrichment_uberon_v019_2=UBERON:0000073,5.85e-32,54;UBERON:0002020,2.96e-30,34;UBERON:0001049,4.03e-29,52;UBERON:0005068,4.03e-29,52;UBERON:0006241,4.03e-29,52;UBERON:0007135,4.03e-29,52;UBERON:0001017,1.68e-27,73;UBERON:0001016,1.89e-26,75;UBERON:0003528,2.48e-23,29;UBERON:0002791,2.48e-23,29;UBERON:0001893,2.48e-23,29;UBERON:0002346,1.04e-21,64;UBERON:0003075,1.04e-21,64;UBERON:0007284,1.04e-21,64;UBERON:0002616,1.11e-21,46;UBERON:0000955,4.90e-21,47;UBERON:0006238,4.90e-21,47;UBERON:0003080,2.65e-20,40;UBERON:0002780,5.40e-19,39;UBERON:0001890,5.40e-19,39;UBERON:0006240,5.40e-19,39;UBERON:0004121,2.12e-18,95;UBERON:0000924,2.12e-18,95;UBERON:0006601,2.12e-18,95;UBERON:0010371,8.93e-18,73;UBERON:0003056,3.72e-15,49;UBERON:0002021,9.68e-15,10;UBERON:0000411,9.68e-15,10;UBERON:0001950,9.68e-15,10;UBERON:0000956,2.05e-13,21;UBERON:0001869,2.05e-13,21;UBERON:0000203,2.05e-13,21;UBERON:0002619,2.52e-13,17;UBERON:0010314,6.55e-13,92;UBERON:0002420,7.94e-12,8;UBERON:0007245,7.94e-12,8;UBERON:0010009,7.94e-12,8;UBERON:0010011,7.94e-12,8;UBERON:0000454,7.94e-12,8;UBERON:0002240,2.05e-09,6;UBERON:0005174,2.05e-09,6;UBERON:0001137,2.05e-09,6;UBERON:0003076,2.69e-09,12;UBERON:0003057,2.69e-09,12;UBERON:0000025,1.50e-08,114;UBERON:0001948,2.39e-08,5;UBERON:0002315,2.39e-08,5;UBERON:0000369,2.74e-08,5;UBERON:0002435,2.74e-08,5;UBERON:0000204,2.74e-08,5;UBERON:0010082,2.74e-08,5;UBERON:0004111,2.19e-07,122|phase1_expression=0.320297694209588,0.348975407639361,0.909998478779072,0.30246421130683,0,0.33575854382378,0.467225281191051,0,0.140788722151667,0.234064526321993,0.171217968225505,0.398860794976682,0.171200729931206,0,0,0.202475267389826,0,0,0,0,0.850432901510698,0.297872853602656,0.261199789138935,0.319984845586813,0.22940928106717,0.57423196411502,0,0,0,0.252030129759931,0.886922042621219,1.27006134691926,0.61506478758457,0,1.1554064790051,0.166234645358492,0,0,0,0,0,0,0,0.251793635951155,0.709638518536602,0.183546752161682,1.56478268869608,0,0,0.58328969722285,0.279972843250725,0,0,0,0,0,0,0,3.43937983461316,5.28990979272033,3.1691570175309,0.338844532069132,0,0,0,0,0,0.384218305321555,0.414758449233911,1.08004750665353,0.630974884054146,3.14216082844184,2.20868540951614,1.22490799214954,0.862609239164127,0.919218786610021,3.30347642998166,1.91531007127782,2.4577045320999,2.76961204233407,1.73826522844578,4.16730696445408,2.23346399201105,1.68828783009504,2.13917546887534,3.24091444021034,1.56608848879013,3.91438836233131,0.151452386666368,0.302286240427142,0.289864488701678,0,0.679971333707751,0,0,0,0.421333260395256,0.340860645156116,0.259786004602869,0,0.845060518660083,1.28326477414318,0,0,0.432982082022428,0.253359865475099,0,0.11418387971906,0,0.593768556259299,0.346970653532272,0.608930956624282,0,0.452167921657868,0.352766121407114,0.376999773989026,0.741584903203122,0.144599356919912,0,0.647067399789637,0.441683036920787,0.484875253135222,0,0.878342391034642,0.83778682725382,0.510914110417183,0.239630249011841,0,0.127070227073065,3.2953940669061,2.28750301409313,2.51308704225729,1.73824320192276,1.53429274398198,2.28566849015516,1.94689515681309,0.509196819251581,0,0.252722758433675,0.631325567659422,0.130120442962704,0.229902104433473,0.180062129805349,0,0.340182495756639,0.640568601424249,0.468508622798644,0.517406741478031,0.215567992932842,0.756424320671277,0.351902248327898,0.219195732427575,0.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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:12457 | |||
|HGNC= | |||
|MCL_coexpression_id=13 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:O35710 | |||
|association_with_transcript=399bp_to_ENSMUST00000167780_5end | |||
|cluster_id=chr3:51028791..51028804,+ | |||
|description=CAGE_peak_5_at_Ccrn4l_5end | |||
|id=chr3:51028791..51028804,+ | |||
|ontology_enrichment_celltype=CL:0000117!1.24e-12!23;CL:0000337!1.24e-12!23 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,5.78e-21,23;CL:0000337,5.78e-21,23;CL:0000540,6.82e-13,33;CL:0000047,6.82e-13,33;CL:0000031,6.82e-13,33;CL:0000404,6.82e-13,33;CL:0000393,4.43e-10,39;CL:0000211,4.43e-10,39;CL:0002319,9.89e-10,43;CL:0000221,2.19e-09,44;CL:0000133,2.19e-09,44 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!3.29e-17!52;UBERON:0005068!3.29e-17!52;UBERON:0006241!3.29e-17!52;UBERON:0007135!3.29e-17!52;UBERON:0002020!1.37e-16!34;UBERON:0000955!7.83e-16!50;UBERON:0006238!7.83e-16!50;UBERON:0002616!1.87e-15!49;UBERON:0001017!4.55e-14!73;UBERON:0005743!4.55e-14!73;UBERON:0002346!9.22e-14!71;UBERON:0003075!9.22e-14!71;UBERON:0007284!9.22e-14!71;UBERON:0000073!1.69e-13!75;UBERON:0001016!1.69e-13!75;UBERON:0002791!1.78e-13!29;UBERON:0003528!1.78e-13!29;UBERON:0001893!1.78e-13!29;UBERON:0000033!3.07e-13!63;UBERON:0003080!2.44e-12!40;UBERON:0004121!3.39e-12!102;UBERON:0000924!3.39e-12!102;UBERON:0006601!3.39e-12!102;UBERON:0002780!1.02e-11!39;UBERON:0001890!1.02e-11!39;UBERON:0006240!1.02e-11!39;UBERON:0003056!1.90e-10!49;UBERON:0000956!6.42e-09!21;UBERON:0001869!6.42e-09!21;UBERON:0000203!6.42e-09!21;UBERON:0002619!3.58e-08!17;UBERON:0002021!2.93e-07!10;UBERON:0000411!2.93e-07!10;UBERON:0001950!2.93e-07!10;UBERON:0007811!4.48e-07!86;UBERON:0000153!5.46e-07!94 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,5.85e-32,54;UBERON:0002020,2.96e-30,34;UBERON:0001049,4.03e-29,52;UBERON:0005068,4.03e-29,52;UBERON:0006241,4.03e-29,52;UBERON:0007135,4.03e-29,52;UBERON:0001017,1.68e-27,73;UBERON:0001016,1.89e-26,75;UBERON:0003528,2.48e-23,29;UBERON:0002791,2.48e-23,29;UBERON:0001893,2.48e-23,29;UBERON:0002346,1.04e-21,64;UBERON:0003075,1.04e-21,64;UBERON:0007284,1.04e-21,64;UBERON:0002616,1.11e-21,46;UBERON:0000955,4.90e-21,47;UBERON:0006238,4.90e-21,47;UBERON:0003080,2.65e-20,40;UBERON:0002780,5.40e-19,39;UBERON:0001890,5.40e-19,39;UBERON:0006240,5.40e-19,39;UBERON:0004121,2.12e-18,95;UBERON:0000924,2.12e-18,95;UBERON:0006601,2.12e-18,95;UBERON:0010371,8.93e-18,73;UBERON:0003056,3.72e-15,49;UBERON:0002021,9.68e-15,10;UBERON:0000411,9.68e-15,10;UBERON:0001950,9.68e-15,10;UBERON:0000956,2.05e-13,21;UBERON:0001869,2.05e-13,21;UBERON:0000203,2.05e-13,21;UBERON:0002619,2.52e-13,17;UBERON:0010314,6.55e-13,92;UBERON:0002420,7.94e-12,8;UBERON:0007245,7.94e-12,8;UBERON:0010009,7.94e-12,8;UBERON:0010011,7.94e-12,8;UBERON:0000454,7.94e-12,8;UBERON:0002240,2.05e-09,6;UBERON:0005174,2.05e-09,6;UBERON:0001137,2.05e-09,6;UBERON:0003076,2.69e-09,12;UBERON:0003057,2.69e-09,12;UBERON:0000025,1.50e-08,114;UBERON:0001948,2.39e-08,5;UBERON:0002315,2.39e-08,5;UBERON:0000369,2.74e-08,5;UBERON:0002435,2.74e-08,5;UBERON:0000204,2.74e-08,5;UBERON:0010082,2.74e-08,5;UBERON:0004111,2.19e-07,122 | |||
|phase1_expression=0.320297694209588,0.348975407639361,0.909998478779072,0.30246421130683,0,0.33575854382378,0.467225281191051,0,0.140788722151667,0.234064526321993,0.171217968225505,0.398860794976682,0.171200729931206,0,0,0.202475267389826,0,0,0,0,0.850432901510698,0.297872853602656,0.261199789138935,0.319984845586813,0.22940928106717,0.57423196411502,0,0,0,0.252030129759931,0.886922042621219,1.27006134691926,0.61506478758457,0,1.1554064790051,0.166234645358492,0,0,0,0,0,0,0,0.251793635951155,0.709638518536602,0.183546752161682,1.56478268869608,0,0,0.58328969722285,0.279972843250725,0,0,0,0,0,0,0,3.43937983461316,5.28990979272033,3.1691570175309,0.338844532069132,0,0,0,0,0,0.384218305321555,0.414758449233911,1.08004750665353,0.630974884054146,3.14216082844184,2.20868540951614,1.22490799214954,0.862609239164127,0.919218786610021,3.30347642998166,1.91531007127782,2.4577045320999,2.76961204233407,1.73826522844578,4.16730696445408,2.23346399201105,1.68828783009504,2.13917546887534,3.24091444021034,1.56608848879013,3.91438836233131,0.151452386666368,0.302286240427142,0.289864488701678,0,0.679971333707751,0,0,0,0.421333260395256,0.340860645156116,0.259786004602869,0,0.845060518660083,1.28326477414318,0,0,0.432982082022428,0.253359865475099,0,0.11418387971906,0,0.593768556259299,0.346970653532272,0.608930956624282,0,0.452167921657868,0.352766121407114,0.376999773989026,0.741584903203122,0.144599356919912,0,0.647067399789637,0.441683036920787,0.484875253135222,0,0.878342391034642,0.83778682725382,0.510914110417183,0.239630249011841,0,0.127070227073065,3.2953940669061,2.28750301409313,2.51308704225729,1.73824320192276,1.53429274398198,2.28566849015516,1.94689515681309,0.509196819251581,0,0.252722758433675,0.631325567659422,0.130120442962704,0.229902104433473,0.180062129805349,0,0.340182495756639,0.640568601424249,0.468508622798644,0.517406741478031,0.215567992932842,0.756424320671277,0.351902248327898,0.219195732427575,0.556094498451196,1.0447564995665,0.411564272815887,0.199034266818493,0,0.257347907114715,0,0.828503090142008,0.469052119962192,0.180062061461015,0.473489471170421,0.787056926989615,0.308534225774757,0,1.07309360559848,0.467061369468678,0.329119699826961,0.492502392237286,0.0810688095458557,0.292399974850665,0.219550115291051,0.134206418760372,2.94405927989778,3.19004298375782,0,0,0,0.232236671860439,0.128867461322093,0.403367049246685,0.22237804384487,0.190225626112559,0,0.658795818896044,0.502670417600539,0,0.19496408711912,0,0,0,0.189667900953082,0.228497025219458,0,0.407302655690628,0.193952487167626,0.210407459670956,0.0632365371242573,0.295220295959204,0,0.123397163921801,0.592905254174298,0.333690211432188,0.589676985339609,0.449724224769707,0,0.482354319504834,0,0.287696137450811,0.486405680325106,0.274561413188081,0,0.372140947668503,0.312037673114561,0,0.358794827043824,0,0,0.757965647081939,0.325929952884052,0.509235257325564,0.469380496577004,0.670025029767263,0.714130922658041,0,0,0.664394068946325,0,0,0.172684981865896,0.144649058581512,1.50791283939272,0,0.491764273019036,0.275936746304732,4.33486592967038,1.64096361229084,0.491804836130026,0,0.315508219416257,0.780877488593277,0,0,0.222798674082394,0,0,0,0,0.963963949265421,0.141940085208269,0,0.81443479676788,0.329940245945071,0,0.242780636154981,0,0.188605079755898,0.295301892880773,0,0,0,0.356497378384721,0,0,0,0.340439605753788,0,0.129358683782755,0.428674070063185,0.177340233642274,0.535106452806212,0.658196082408484,0.304464949114599,0.938686832254841,1.0591603543191,0.220528398054962,0.49465875882444,0.645857706783622,0.361877549568935,0.477489376012546,0.164140899745061,0,1.66882771809459,0,0.412773735926445,0,0.376736914009382,0.27338845544205,0.457556346413045,0,0.139951452323658,0,0.954670618015114,0.474503990371703,0.203319467126849,0.756037385752609,0.209088296014469,0.436725127492355,0.539457385539283,0.247960367176008,0,0.388844919875379,0,1.12738587736838,0,0.827292452285488,1.36115831840833,0.516639293910924,0.506868376472335,0.704143431874524,2.21347454234715,1.36317147753424,1.44950472495604,2.30424005006292,0,0,0.308132871494482,0.25984164595559,0.358053391334963,0,0.360586348559907,0.443068581523732,0,0.228620419965,0.302478555410522,0.194915761479505,0.192423683280659,0,0.453460767230423,0.887943813496259,0.358855426437903,0.503653849092235,0.579568782096571,0.187682475451182,0,0.428736758158132,0,2.25900737046827,3.22227665555024,2.86447756719698,3.78077001156113,1.37016503954128,3.0215755895588,2.02506750069542,1.80128481289688,2.71885445390523,2.5888015587591,0.830298780673413,1.19707462020309,0.853668028770671,0.486213434136588,0.628839487883947,0.735374033800057,0.44449345560323,0,0.320919209591815,1.01078884705519,0.760437899670719,1.13175804831646,0.936415074698824,0.320125762024346,0.689225627467359,0.952587382566147,0.695305955669133,1.35036454324594,0.412085900803307,0.147198920134397,1.02860775715625,0,0.715308569841963,1.0174249164263,0.752875043322645,0.676916863133412,1.09756783723664,0.526139422875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| |||
|short_description=p5@Ccrn4l | |||
}} |
Revision as of 20:00, 3 August 2015
Short description: | p5@Ccrn4l |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_Ccrn4l_5end |
Coexpression cluster: | MCL_coexpression_mm9:13 |
Association with transcript: | 399bp_to_ENSMUST00000167780_5end |
EntrezGene: | 12457 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 5.78e-21 | 23 |
neuroblast (sensu Vertebrata) | 5.78e-21 | 23 |
neuron | 6.82e-13 | 33 |
neuronal stem cell | 6.82e-13 | 33 |
neuroblast | 6.82e-13 | 33 |
electrically signaling cell | 6.82e-13 | 33 |
electrically responsive cell | 4.43e-10 | 39 |
electrically active cell | 4.43e-10 | 39 |
neural cell | 9.89e-10 | 43 |
ectodermal cell | 2.19e-09 | 44 |
neurectodermal cell | 2.19e-09 | 44 |