FFCP PHASE1:Mm9::chr10:126516096..126516125,+: Difference between revisions
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{{FFCP|EntrezGene=216439|HGNC=|MCL_coexpression_id=2|UniProt=Q3UHD9|association_with_transcript=133bp_to_ENSMUST00000039259,ENSMUST00000105254,NM_001033263,uc007hhx.1,uc007hhy.1_5end|description=CAGE_peak_2_at_Agap2_5end|id=chr10:126516096..126516125,+|ontology_enrichment_celltype=CL:0000117!4.86e-13!23;CL:0000337!4.86e-13!23;CL:0000540!2.40e-09!33;CL:0000047!2.40e-09!33;CL:0000031!2.40e-09!33;CL:0000404!2.40e-09!33|ontology_enrichment_celltype_v019_2=CL:0000117,4.09e-16,23;CL:0000337,4.09e-16,23;CL:0000540,1.00e-09,33;CL:0000047,1.00e-09,33;CL:0000031,1.00e-09,33;CL:0000404,1.00e-09,33;CL:0002319,3.67e-07,43;CL:0000393,7.37e-07,39;CL:0000211,7.37e-07,39;CL:0000221,8.58e-07,44;CL:0000133,8.58e-07,44|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001049!4.16e-21!52;UBERON:0005068!4.16e-21!52;UBERON:0006241!4.16e-21!52;UBERON:0007135!4.16e-21!52;UBERON:0001017!4.29e-21!73;UBERON:0005743!4.29e-21!73;UBERON:0002346!5.70e-20!71;UBERON:0003075!5.70e-20!71;UBERON:0007284!5.70e-20!71;UBERON:0000955!9.96e-20!50;UBERON:0006238!9.96e-20!50;UBERON:0000073!1.59e-19!75;UBERON:0001016!1.59e-19!75;UBERON:0000033!1.96e-19!63;UBERON:0002616!5.28e-19!49;UBERON:0002020!2.42e-17!34;UBERON:0003056!6.35e-17!49;UBERON:0004121!8.34e-17!102;UBERON:0000924!8.34e-17!102;UBERON:0006601!8.34e-17!102;UBERON:0003080!2.83e-16!40;UBERON:0002780!9.81e-16!39;UBERON:0001890!9.81e-16!39;UBERON:0006240!9.81e-16!39;UBERON:0002791!3.68e-14!29;UBERON:0003528!3.68e-14!29;UBERON:0001893!3.68e-14!29;UBERON:0000956!1.18e-09!21;UBERON:0001869!1.18e-09!21;UBERON:0000203!1.18e-09!21;UBERON:0007811!2.16e-09!86;UBERON:0000153!1.09e-08!94;UBERON:0002619!3.18e-08!17;UBERON:0002021!3.67e-08!10;UBERON:0000411!3.67e-08!10;UBERON:0001950!3.67e-08!10;UBERON:0000468!1.96e-07!333|ontology_enrichment_uberon_v019_2=UBERON:0000073,1.41e-28,54;UBERON:0001049,4.80e-27,52;UBERON:0005068,4.80e-27,52;UBERON:0006241,4.80e-27,52;UBERON:0007135,4.80e-27,52;UBERON:0001017,1.36e-25,73;UBERON:0002346,2.46e-25,64;UBERON:0003075,2.46e-25,64;UBERON:0007284,2.46e-25,64;UBERON:0001016,2.94e-24,75;UBERON:0000955,4.00e-23,47;UBERON:0006238,4.00e-23,47;UBERON:0002020,2.10e-22,34;UBERON:0002616,3.24e-22,46;UBERON:0003056,4.89e-21,49;UBERON:0003080,1.62e-20,40;UBERON:0004121,2.38e-20,95;UBERON:0000924,2.38e-20,95;UBERON:0006601,2.38e-20,95;UBERON:0010371,3.40e-20,73;UBERON:0002780,7.90e-20,39;UBERON:0001890,7.90e-20,39;UBERON:0006240,7.90e-20,39;UBERON:0003528,2.47e-18,29;UBERON:0002791,2.47e-18,29;UBERON:0001893,2.47e-18,29;UBERON:0010314,6.87e-17,92;UBERON:0000956,1.43e-12,21;UBERON:0001869,1.43e-12,21;UBERON:0000203,1.43e-12,21;UBERON:0002619,9.10e-11,17;UBERON:0002021,6.22e-10,10;UBERON:0000411,6.22e-10,10;UBERON:0001950,6.22e-10,10;UBERON:0000025,4.75e-07,114;UBERON:0002420,4.90e-07,8;UBERON:0007245,4.90e-07,8;UBERON:0010009,4.90e-07,8;UBERON:0010011,4.90e-07,8;UBERON:0000454,4.90e-07,8;UBERON:0003076,5.08e-07,12;UBERON:0003057,5.08e-07,12|phase1_expression=1.28119077683835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.20816018102809,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125896817975577,0,0.734187008646726,2.34717403304412,0,0,0,0,0,0,0,0,0,0,0,44.9142543108307,56.6020347821075,43.7343668419264,0.338844532069132,0,0,0.988866362566974,0.7104801149461,1.79760066311043,3.84218305321555,2.28117147078651,6.21027316325777,4.6271491497304,41.9906947073591,48.3702104684034,7.22695715368229,6.51749202924007,9.19218786610021,8.8092704799511,19.1531007127782,15.3606533256243,45.1051104037263,56.8138266770964,49.4867702028922,5.58365998002762,10.1297269805702,15.7382195210114,67.7645746589436,52.3927785340699,40.0758808524396,0,0,0.289864488701678,0,0,0.539703191637817,0,0,1.12355536105401,0,0,0,0.281686839553361,0,0,0,0,0,0,1.25602267690966,0,3.71105347662062,0.520455980298408,0.608930956624282,0.922461989024234,0.904335843315735,1.05829836422134,0.753999547978053,0,2.02439099687876,0,0.161766849947409,1.10420759230197,0,0,7.61230072230023,26.8091784721222,0.510914110417183,0,0,0,10.7849260371472,65.4225862030636,42.7224797183739,70.398849677872,61.6274252166097,21.1943805450751,34.5573890334324,1.73126918545538,1.11966273549084,0.252722758433675,1.05220927943237,1.04096354370163,0.229902104433473,1.26043490863744,1.35634336052144,1.97305847538851,4.35586648968489,3.74806898238915,5.17406741478031,0,0.756424320671277,1.05570674498369,1.7535658594206,0.834141747676794,0.348252166522167,0.205782136407943,1.99034266818493,0,0,0,0,0.234526059981096,0.180062061461015,0,0,0.308534225774757,0.465067889500816,0.804820204198858,1.5179494507732,0,0.985004784474571,4.86412857275134,3.65499968563331,1.75640092232841,4.69722465661301,119.865270681553,25.0058208081661,0.330418782983798,0.528901133327089,0.213288250535234,1.39342003116263,0.38660238396628,0.403367049246685,0.889512175379481,0.380451252225118,0,0.164698954724011,0.754005626400808,0.397912944082302,0.58489226135736,0.898819408654221,0.432276099749388,0.796565093017469,0.189667900953082,0.456994050438915,2.25415471346161,0.814605311381257,0.193952487167626,0.631222379012867,0.822074982615345,0,0,0,0,0.166845105716094,0.196558995113203,0,0,0,0,0,0,0,1.43768206527355,0,0,0,0,0,0,0.189491411770485,0.325929952884052,0,0.938760993154008,0.167506257441816,0,1.36593553500459,0.157635144106191,0,0,0.163863314715738,0.172684981865896,0,0,0,0,0,5.9403718295483,5.39173758324135,0.163934945376675,2.27223834483936,0,0,0.646270193198397,0.238968797952552,0.445597348164788,0.283076530788832,0.809621403349789,0.292255857911312,1.58115111178609,108.606604950571,0.99358059645788,5.34196811001766,3.25773918707152,5.60898418106621,0,1.94224508923985,1.51161778482376,0.754420319023592,0,0.307435147943927,0,0,0.356497378384721,0.316036757935816,0,0,0.340439605753788,1.08036656418786,1.81102157295856,2.14337035031592,5.32020700926821,1.78368817602071,1.81003922662333,1.8267896946876,0.23467170806371,0,0.220528398054962,0.16488625294148,0.484393280087717,0.0603129249281559,0.119372344003136,0,1.7488850197791,7.97328798645192,0.170870880797853,0,0,0.376736914009382,0.136694227721025,0.228778173206523,0,0,0,2.86401185404534,0.949007980743406,1.42323626988794,0.648032044930808,0.418176592028937,0.655087691238533,0.809186078308924,0.661227645802687,0.26175594198403,0.518459893167171,0,0,0.299033092087958,0.330916980914195,0.777804753376191,1.16243841129958,1.01373675294467,1.5256441023948,3.1249052362548,1.46803082195995,0.724752362478018,0.576060012515731,0,0.810900861160657,0.410843828659309,0,0,0.198681354781265,0.240390899039938,0.147689527174577,0.100966449948148,0.228620419965,0.403304740547362,0,0.288635524920988,0.116876902181569,1.13365191807606,0,0,0,0.386379188064381,0.750729901804728,3.47988086107804,0.428736758158132,0,152.482997506608,135.795944769617,154.681788628637,193.85038968368,54.8066015816514,55.8991484068378,76.2775425261941,55.8398291998033,47.1268105343573,47.6339486811674,0.518936737920883,5.58634822761443,4.09760653809922,6.32077464377565,8.80375283037526,9.37601893095072,5.55616819504038,7.2112270033613,6.09746498224449,5.55933865880354,7.85785829659743,7.35642731405697,5.61849044819294,7.04276676453562,6.14559517825062,7.62069906052918,5.09891034157364,3.8581844092741,4.94503080963968,3.09117732282234,6.85738504770831,7.0990322463735,5.00715998889374,3.92435324907287,6.21121910741182,5.58456412085065,5.48783918618318,3.15683653725411,5.70377278152619,5.05028044491965,4.98267076121531,4.0386837773981,3.6830793885272,6.35241048862461,6.94463799532109,14.4890135204009,5.38042699424439,4.29742108096597,5.92993829413414,2.20591419119516,0.695603506861264|short_description=p2@Agap2}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:216439 | |||
|HGNC= | |||
|MCL_coexpression_id=2 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:Q3UHD9 | |||
|association_with_transcript=133bp_to_ENSMUST00000039259,ENSMUST00000105254,NM_001033263,uc007hhx.1,uc007hhy.1_5end | |||
|cluster_id=chr10:126516096..126516125,+ | |||
|description=CAGE_peak_2_at_Agap2_5end | |||
|id=chr10:126516096..126516125,+ | |||
|ontology_enrichment_celltype=CL:0000117!4.86e-13!23;CL:0000337!4.86e-13!23;CL:0000540!2.40e-09!33;CL:0000047!2.40e-09!33;CL:0000031!2.40e-09!33;CL:0000404!2.40e-09!33 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,4.09e-16,23;CL:0000337,4.09e-16,23;CL:0000540,1.00e-09,33;CL:0000047,1.00e-09,33;CL:0000031,1.00e-09,33;CL:0000404,1.00e-09,33;CL:0002319,3.67e-07,43;CL:0000393,7.37e-07,39;CL:0000211,7.37e-07,39;CL:0000221,8.58e-07,44;CL:0000133,8.58e-07,44 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!4.16e-21!52;UBERON:0005068!4.16e-21!52;UBERON:0006241!4.16e-21!52;UBERON:0007135!4.16e-21!52;UBERON:0001017!4.29e-21!73;UBERON:0005743!4.29e-21!73;UBERON:0002346!5.70e-20!71;UBERON:0003075!5.70e-20!71;UBERON:0007284!5.70e-20!71;UBERON:0000955!9.96e-20!50;UBERON:0006238!9.96e-20!50;UBERON:0000073!1.59e-19!75;UBERON:0001016!1.59e-19!75;UBERON:0000033!1.96e-19!63;UBERON:0002616!5.28e-19!49;UBERON:0002020!2.42e-17!34;UBERON:0003056!6.35e-17!49;UBERON:0004121!8.34e-17!102;UBERON:0000924!8.34e-17!102;UBERON:0006601!8.34e-17!102;UBERON:0003080!2.83e-16!40;UBERON:0002780!9.81e-16!39;UBERON:0001890!9.81e-16!39;UBERON:0006240!9.81e-16!39;UBERON:0002791!3.68e-14!29;UBERON:0003528!3.68e-14!29;UBERON:0001893!3.68e-14!29;UBERON:0000956!1.18e-09!21;UBERON:0001869!1.18e-09!21;UBERON:0000203!1.18e-09!21;UBERON:0007811!2.16e-09!86;UBERON:0000153!1.09e-08!94;UBERON:0002619!3.18e-08!17;UBERON:0002021!3.67e-08!10;UBERON:0000411!3.67e-08!10;UBERON:0001950!3.67e-08!10;UBERON:0000468!1.96e-07!333 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,1.41e-28,54;UBERON:0001049,4.80e-27,52;UBERON:0005068,4.80e-27,52;UBERON:0006241,4.80e-27,52;UBERON:0007135,4.80e-27,52;UBERON:0001017,1.36e-25,73;UBERON:0002346,2.46e-25,64;UBERON:0003075,2.46e-25,64;UBERON:0007284,2.46e-25,64;UBERON:0001016,2.94e-24,75;UBERON:0000955,4.00e-23,47;UBERON:0006238,4.00e-23,47;UBERON:0002020,2.10e-22,34;UBERON:0002616,3.24e-22,46;UBERON:0003056,4.89e-21,49;UBERON:0003080,1.62e-20,40;UBERON:0004121,2.38e-20,95;UBERON:0000924,2.38e-20,95;UBERON:0006601,2.38e-20,95;UBERON:0010371,3.40e-20,73;UBERON:0002780,7.90e-20,39;UBERON:0001890,7.90e-20,39;UBERON:0006240,7.90e-20,39;UBERON:0003528,2.47e-18,29;UBERON:0002791,2.47e-18,29;UBERON:0001893,2.47e-18,29;UBERON:0010314,6.87e-17,92;UBERON:0000956,1.43e-12,21;UBERON:0001869,1.43e-12,21;UBERON:0000203,1.43e-12,21;UBERON:0002619,9.10e-11,17;UBERON:0002021,6.22e-10,10;UBERON:0000411,6.22e-10,10;UBERON:0001950,6.22e-10,10;UBERON:0000025,4.75e-07,114;UBERON:0002420,4.90e-07,8;UBERON:0007245,4.90e-07,8;UBERON:0010009,4.90e-07,8;UBERON:0010011,4.90e-07,8;UBERON:0000454,4.90e-07,8;UBERON:0003076,5.08e-07,12;UBERON:0003057,5.08e-07,12 | |||
|phase1_expression=1.28119077683835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.20816018102809,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125896817975577,0,0.734187008646726,2.34717403304412,0,0,0,0,0,0,0,0,0,0,0,44.9142543108307,56.6020347821075,43.7343668419264,0.338844532069132,0,0,0.988866362566974,0.7104801149461,1.79760066311043,3.84218305321555,2.28117147078651,6.21027316325777,4.6271491497304,41.9906947073591,48.3702104684034,7.22695715368229,6.51749202924007,9.19218786610021,8.8092704799511,19.1531007127782,15.3606533256243,45.1051104037263,56.8138266770964,49.4867702028922,5.58365998002762,10.1297269805702,15.7382195210114,67.7645746589436,52.3927785340699,40.0758808524396,0,0,0.289864488701678,0,0,0.539703191637817,0,0,1.12355536105401,0,0,0,0.281686839553361,0,0,0,0,0,0,1.25602267690966,0,3.71105347662062,0.520455980298408,0.608930956624282,0.922461989024234,0.904335843315735,1.05829836422134,0.753999547978053,0,2.02439099687876,0,0.161766849947409,1.10420759230197,0,0,7.61230072230023,26.8091784721222,0.510914110417183,0,0,0,10.7849260371472,65.4225862030636,42.7224797183739,70.398849677872,61.6274252166097,21.1943805450751,34.5573890334324,1.73126918545538,1.11966273549084,0.252722758433675,1.05220927943237,1.04096354370163,0.229902104433473,1.26043490863744,1.35634336052144,1.97305847538851,4.35586648968489,3.74806898238915,5.17406741478031,0,0.756424320671277,1.05570674498369,1.7535658594206,0.834141747676794,0.348252166522167,0.205782136407943,1.99034266818493,0,0,0,0,0.234526059981096,0.180062061461015,0,0,0.308534225774757,0.465067889500816,0.804820204198858,1.5179494507732,0,0.985004784474571,4.86412857275134,3.65499968563331,1.75640092232841,4.69722465661301,119.865270681553,25.0058208081661,0.330418782983798,0.528901133327089,0.213288250535234,1.39342003116263,0.38660238396628,0.403367049246685,0.889512175379481,0.380451252225118,0,0.164698954724011,0.754005626400808,0.397912944082302,0.58489226135736,0.898819408654221,0.432276099749388,0.796565093017469,0.189667900953082,0.456994050438915,2.25415471346161,0.814605311381257,0.193952487167626,0.631222379012867,0.822074982615345,0,0,0,0,0.166845105716094,0.196558995113203,0,0,0,0,0,0,0,1.43768206527355,0,0,0,0,0,0,0.189491411770485,0.325929952884052,0,0.938760993154008,0.167506257441816,0,1.36593553500459,0.157635144106191,0,0,0.163863314715738,0.172684981865896,0,0,0,0,0,5.9403718295483,5.39173758324135,0.163934945376675,2.27223834483936,0,0,0.646270193198397,0.238968797952552,0.445597348164788,0.283076530788832,0.809621403349789,0.292255857911312,1.58115111178609,108.606604950571,0.99358059645788,5.34196811001766,3.25773918707152,5.60898418106621,0,1.94224508923985,1.51161778482376,0.754420319023592,0,0.307435147943927,0,0,0.356497378384721,0.316036757935816,0,0,0.340439605753788,1.08036656418786,1.81102157295856,2.14337035031592,5.32020700926821,1.78368817602071,1.81003922662333,1.8267896946876,0.23467170806371,0,0.220528398054962,0.16488625294148,0.484393280087717,0.0603129249281559,0.119372344003136,0,1.7488850197791,7.97328798645192,0.170870880797853,0,0,0.376736914009382,0.136694227721025,0.228778173206523,0,0,0,2.86401185404534,0.949007980743406,1.42323626988794,0.648032044930808,0.418176592028937,0.655087691238533,0.809186078308924,0.661227645802687,0.26175594198403,0.518459893167171,0,0,0.299033092087958,0.330916980914195,0.777804753376191,1.16243841129958,1.01373675294467,1.5256441023948,3.1249052362548,1.46803082195995,0.724752362478018,0.576060012515731,0,0.810900861160657,0.410843828659309,0,0,0.198681354781265,0.240390899039938,0.147689527174577,0.100966449948148,0.228620419965,0.403304740547362,0,0.288635524920988,0.116876902181569,1.13365191807606,0,0,0,0.386379188064381,0.750729901804728,3.47988086107804,0.428736758158132,0,152.482997506608,135.795944769617,154.681788628637,193.85038968368,54.8066015816514,55.8991484068378,76.2775425261941,55.8398291998033,47.1268105343573,47.6339486811674,0.518936737920883,5.58634822761443,4.09760653809922,6.32077464377565,8.80375283037526,9.37601893095072,5.55616819504038,7.2112270033613,6.09746498224449,5.55933865880354,7.85785829659743,7.35642731405697,5.61849044819294,7.04276676453562,6.14559517825062,7.62069906052918,5.09891034157364,3.8581844092741,4.94503080963968,3.09117732282234,6.85738504770831,7.0990322463735,5.00715998889374,3.92435324907287,6.21121910741182,5.58456412085065,5.48783918618318,3.15683653725411,5.70377278152619,5.05028044491965,4.98267076121531,4.0386837773981,3.6830793885272,6.35241048862461,6.94463799532109,14.4890135204009,5.38042699424439,4.29742108096597,5.92993829413414,2.20591419119516,0.695603506861264 | |||
|short_description=p2@Agap2 | |||
}} |
Revision as of 00:41, 4 August 2015
Short description: | p2@Agap2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Agap2_5end |
Coexpression cluster: | MCL_coexpression_mm9:2 |
Association with transcript: | 133bp_to_ENSMUST00000039259, ENSMUST00000105254, NM_001033263, uc007hhx.1, uc007hhy.1_5end |
EntrezGene: | 216439 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 4.09e-16 | 23 |
neuroblast (sensu Vertebrata) | 4.09e-16 | 23 |
neuron | 1.00e-09 | 33 |
neuronal stem cell | 1.00e-09 | 33 |
neuroblast | 1.00e-09 | 33 |
electrically signaling cell | 1.00e-09 | 33 |
neural cell | 3.67e-07 | 43 |
electrically responsive cell | 7.37e-07 | 39 |
electrically active cell | 7.37e-07 | 39 |
ectodermal cell | 8.58e-07 | 44 |
neurectodermal cell | 8.58e-07 | 44 |