FFCP PHASE1:Mm9::chr5:27588608..27588665,+: Difference between revisions
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{{FFCP|EntrezGene=13483|HGNC=|MCL_coexpression_id=2|UniProt=Q80VM5,D6RFR3|association_with_transcript=93bp_to_ENSMUST00000101471,ENSMUST00000148039_5end|description=CAGE_peak_3_at_Dpp6_5end|id=chr5:27588608..27588665,+|ontology_enrichment_celltype=CL:0000117!4.51e-11!23;CL:0000337!4.51e-11!23;CL:0000540!3.68e-09!33;CL:0000047!3.68e-09!33;CL:0000031!3.68e-09!33;CL:0000404!3.68e-09!33|ontology_enrichment_celltype_v019_2=CL:0000117,5.71e-13,23;CL:0000337,5.71e-13,23;CL:0000540,7.43e-10,33;CL:0000047,7.43e-10,33;CL:0000031,7.43e-10,33;CL:0000404,7.43e-10,33;CL:0000393,2.45e-07,39;CL:0000211,2.45e-07,39|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002346!4.19e-29!71;UBERON:0003075!4.19e-29!71;UBERON:0007284!4.19e-29!71;UBERON:0001017!2.68e-25!73;UBERON:0005743!2.68e-25!73;UBERON:0003056!6.92e-25!49;UBERON:0000033!1.37e-24!63;UBERON:0001049!4.49e-24!52;UBERON:0005068!4.49e-24!52;UBERON:0006241!4.49e-24!52;UBERON:0007135!4.49e-24!52;UBERON:0000073!8.38e-24!75;UBERON:0001016!8.38e-24!75;UBERON:0000955!7.04e-23!50;UBERON:0006238!7.04e-23!50;UBERON:0002616!4.07e-22!49;UBERON:0004121!1.90e-21!102;UBERON:0000924!1.90e-21!102;UBERON:0006601!1.90e-21!102;UBERON:0003080!8.98e-20!40;UBERON:0002780!3.74e-19!39;UBERON:0001890!3.74e-19!39;UBERON:0006240!3.74e-19!39;UBERON:0002020!4.94e-17!34;UBERON:0007811!9.40e-16!86;UBERON:0002791!5.36e-14!29;UBERON:0003528!5.36e-14!29;UBERON:0001893!5.36e-14!29;UBERON:0000153!1.35e-12!94;UBERON:0000956!3.81e-09!21;UBERON:0001869!3.81e-09!21;UBERON:0000203!3.81e-09!21;UBERON:0002021!3.90e-09!10;UBERON:0000411!3.90e-09!10;UBERON:0001950!3.90e-09!10;UBERON:0002619!2.39e-08!17|ontology_enrichment_uberon_v019_2=UBERON:0002346,1.14e-40,64;UBERON:0003075,1.14e-40,64;UBERON:0007284,1.14e-40,64;UBERON:0000073,2.98e-34,54;UBERON:0010371,2.80e-33,73;UBERON:0001049,2.52e-32,52;UBERON:0005068,2.52e-32,52;UBERON:0006241,2.52e-32,52;UBERON:0007135,2.52e-32,52;UBERON:0001017,3.16e-32,73;UBERON:0003056,2.47e-31,49;UBERON:0001016,7.28e-31,75;UBERON:0004121,9.31e-31,95;UBERON:0000924,9.31e-31,95;UBERON:0006601,9.31e-31,95;UBERON:0000955,7.54e-28,47;UBERON:0006238,7.54e-28,47;UBERON:0002616,8.97e-27,46;UBERON:0003080,3.28e-25,40;UBERON:0002780,2.54e-24,39;UBERON:0001890,2.54e-24,39;UBERON:0006240,2.54e-24,39;UBERON:0010314,1.57e-22,92;UBERON:0002020,3.17e-21,34;UBERON:0003528,6.77e-17,29;UBERON:0002791,6.77e-17,29;UBERON:0001893,6.77e-17,29;UBERON:0002021,1.17e-12,10;UBERON:0000411,1.17e-12,10;UBERON:0001950,1.17e-12,10;UBERON:0002619,1.33e-11,17;UBERON:0000956,4.25e-10,21;UBERON:0001869,4.25e-10,21;UBERON:0000203,4.25e-10,21;UBERON:0002420,1.59e-08,8;UBERON:0007245,1.59e-08,8;UBERON:0010009,1.59e-08,8;UBERON:0010011,1.59e-08,8;UBERON:0000454,1.59e-08,8;UBERON:0001894,2.41e-08,10;UBERON:0006222,2.41e-08,10;UBERON:0003076,1.95e-07,12;UBERON:0003057,1.95e-07,12;UBERON:0000025,5.91e-07,114|phase1_expression=0,0,0,0,0,0,0,0.129123323441576,0,0,0,0,0,0,0,0,0,0,0,0,3.14660173558958,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.194429899074283,0.139986421625363,0,0,0,0,0,0,0,11.5320382689971,13.2247744818008,8.87363964908651,0,0,0,0,0,0,0.768436610643109,0.933206510776299,0.540023753326763,0.210324961351382,4.28476476605705,5.52171352379034,1.10241719293459,1.43768206527355,0,4.40463523997555,11.6195477657521,8.44835932909339,12.924856197559,12.2593442427229,9.89735404057844,4.74611098302348,11.8180148106653,12.9878510610289,11.1958862479994,10.5355043791336,12.4887628702951,0,0,0,0,0,0,0,0,0.561777680527007,0,0,0,0,0,0,0,0,0,0,0.34255163915718,0,0,0.520455980298408,0.608930956624282,0.230615497256059,0.301445281105245,0.470354828542819,0,0,0,0,0,0,0,0,6.73395833126558,4.39838084308256,0.255457055208591,0,0,0,8.53806644607489,10.980014467647,4.02093926761166,29.2024857923024,29.407277592988,10.8049783170971,20.2801578834697,0.407357455401265,0.497627882440372,0,0.841767423545896,4.29397461776922,5.51765050640335,12.6043490863744,10.7000420663358,10.1374383735478,8.96796041993949,5.43470002446427,2.84573707812917,0,0.189106080167819,0,0,0,0,0,0.199034266818493,0,0,0,0,0,0,0.23674473558521,0,0,0,0,0,0,0,0,0,0,0,43.5300193527743,10.2904612379284,0,0,0,0,0.38660238396628,0.605050573870028,0.22237804384487,0.380451252225118,0.474529061544512,0.494096864172033,1.25667604400135,0.198956472041151,0.779856348476481,0.898819408654221,0.216138049874694,0.199141273254367,0,0.114248512609729,0,0.203651327845314,0.193952487167626,0.701358198903186,0.126473074248515,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.18808008937739,7.14991288212439,0,0,1.26203287766503,1.56175497718655,1.72338718186239,0,0.222798674082394,0,0.404810701674894,0,0.790575555893047,15.4234231882467,0.141940085208269,0.178065603667255,0.162886959353576,0.494910368917606,0,0.728341908464944,0.906970670894253,1.13163047853539,0.295301892880773,0.614870295887855,0.516856586336442,0,0.712994756769443,0.316036757935816,0,0,4.42571487479924,1.8006109403131,1.6816628891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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:13483 | |||
|HGNC= | |||
|MCL_coexpression_id=2 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:Q80VM5,uniprot:D6RFR3 | |||
|association_with_transcript=93bp_to_ENSMUST00000101471,ENSMUST00000148039_5end | |||
|cluster_id=chr5:27588608..27588665,+ | |||
|description=CAGE_peak_3_at_Dpp6_5end | |||
|id=chr5:27588608..27588665,+ | |||
|ontology_enrichment_celltype=CL:0000117!4.51e-11!23;CL:0000337!4.51e-11!23;CL:0000540!3.68e-09!33;CL:0000047!3.68e-09!33;CL:0000031!3.68e-09!33;CL:0000404!3.68e-09!33 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,5.71e-13,23;CL:0000337,5.71e-13,23;CL:0000540,7.43e-10,33;CL:0000047,7.43e-10,33;CL:0000031,7.43e-10,33;CL:0000404,7.43e-10,33;CL:0000393,2.45e-07,39;CL:0000211,2.45e-07,39 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002346!4.19e-29!71;UBERON:0003075!4.19e-29!71;UBERON:0007284!4.19e-29!71;UBERON:0001017!2.68e-25!73;UBERON:0005743!2.68e-25!73;UBERON:0003056!6.92e-25!49;UBERON:0000033!1.37e-24!63;UBERON:0001049!4.49e-24!52;UBERON:0005068!4.49e-24!52;UBERON:0006241!4.49e-24!52;UBERON:0007135!4.49e-24!52;UBERON:0000073!8.38e-24!75;UBERON:0001016!8.38e-24!75;UBERON:0000955!7.04e-23!50;UBERON:0006238!7.04e-23!50;UBERON:0002616!4.07e-22!49;UBERON:0004121!1.90e-21!102;UBERON:0000924!1.90e-21!102;UBERON:0006601!1.90e-21!102;UBERON:0003080!8.98e-20!40;UBERON:0002780!3.74e-19!39;UBERON:0001890!3.74e-19!39;UBERON:0006240!3.74e-19!39;UBERON:0002020!4.94e-17!34;UBERON:0007811!9.40e-16!86;UBERON:0002791!5.36e-14!29;UBERON:0003528!5.36e-14!29;UBERON:0001893!5.36e-14!29;UBERON:0000153!1.35e-12!94;UBERON:0000956!3.81e-09!21;UBERON:0001869!3.81e-09!21;UBERON:0000203!3.81e-09!21;UBERON:0002021!3.90e-09!10;UBERON:0000411!3.90e-09!10;UBERON:0001950!3.90e-09!10;UBERON:0002619!2.39e-08!17 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002346,1.14e-40,64;UBERON:0003075,1.14e-40,64;UBERON:0007284,1.14e-40,64;UBERON:0000073,2.98e-34,54;UBERON:0010371,2.80e-33,73;UBERON:0001049,2.52e-32,52;UBERON:0005068,2.52e-32,52;UBERON:0006241,2.52e-32,52;UBERON:0007135,2.52e-32,52;UBERON:0001017,3.16e-32,73;UBERON:0003056,2.47e-31,49;UBERON:0001016,7.28e-31,75;UBERON:0004121,9.31e-31,95;UBERON:0000924,9.31e-31,95;UBERON:0006601,9.31e-31,95;UBERON:0000955,7.54e-28,47;UBERON:0006238,7.54e-28,47;UBERON:0002616,8.97e-27,46;UBERON:0003080,3.28e-25,40;UBERON:0002780,2.54e-24,39;UBERON:0001890,2.54e-24,39;UBERON:0006240,2.54e-24,39;UBERON:0010314,1.57e-22,92;UBERON:0002020,3.17e-21,34;UBERON:0003528,6.77e-17,29;UBERON:0002791,6.77e-17,29;UBERON:0001893,6.77e-17,29;UBERON:0002021,1.17e-12,10;UBERON:0000411,1.17e-12,10;UBERON:0001950,1.17e-12,10;UBERON:0002619,1.33e-11,17;UBERON:0000956,4.25e-10,21;UBERON:0001869,4.25e-10,21;UBERON:0000203,4.25e-10,21;UBERON:0002420,1.59e-08,8;UBERON:0007245,1.59e-08,8;UBERON:0010009,1.59e-08,8;UBERON:0010011,1.59e-08,8;UBERON:0000454,1.59e-08,8;UBERON:0001894,2.41e-08,10;UBERON:0006222,2.41e-08,10;UBERON:0003076,1.95e-07,12;UBERON:0003057,1.95e-07,12;UBERON:0000025,5.91e-07,114 | |||
|phase1_expression=0,0,0,0,0,0,0,0.129123323441576,0,0,0,0,0,0,0,0,0,0,0,0,3.14660173558958,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.194429899074283,0.139986421625363,0,0,0,0,0,0,0,11.5320382689971,13.2247744818008,8.87363964908651,0,0,0,0,0,0,0.768436610643109,0.933206510776299,0.540023753326763,0.210324961351382,4.28476476605705,5.52171352379034,1.10241719293459,1.43768206527355,0,4.40463523997555,11.6195477657521,8.44835932909339,12.924856197559,12.2593442427229,9.89735404057844,4.74611098302348,11.8180148106653,12.9878510610289,11.1958862479994,10.5355043791336,12.4887628702951,0,0,0,0,0,0,0,0,0.561777680527007,0,0,0,0,0,0,0,0,0,0,0.34255163915718,0,0,0.520455980298408,0.608930956624282,0.230615497256059,0.301445281105245,0.470354828542819,0,0,0,0,0,0,0,0,6.73395833126558,4.39838084308256,0.255457055208591,0,0,0,8.53806644607489,10.980014467647,4.02093926761166,29.2024857923024,29.407277592988,10.8049783170971,20.2801578834697,0.407357455401265,0.497627882440372,0,0.841767423545896,4.29397461776922,5.51765050640335,12.6043490863744,10.7000420663358,10.1374383735478,8.96796041993949,5.43470002446427,2.84573707812917,0,0.189106080167819,0,0,0,0,0,0.199034266818493,0,0,0,0,0,0,0.23674473558521,0,0,0,0,0,0,0,0,0,0,0,43.5300193527743,10.2904612379284,0,0,0,0,0.38660238396628,0.605050573870028,0.22237804384487,0.380451252225118,0.474529061544512,0.494096864172033,1.25667604400135,0.198956472041151,0.779856348476481,0.898819408654221,0.216138049874694,0.199141273254367,0,0.114248512609729,0,0.203651327845314,0.193952487167626,0.701358198903186,0.126473074248515,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.18808008937739,7.14991288212439,0,0,1.26203287766503,1.56175497718655,1.72338718186239,0,0.222798674082394,0,0.404810701674894,0,0.790575555893047,15.4234231882467,0.141940085208269,0.178065603667255,0.162886959353576,0.494910368917606,0,0.728341908464944,0.906970670894253,1.13163047853539,0.295301892880773,0.614870295887855,0.516856586336442,0,0.712994756769443,0.316036757935816,0,0,4.42571487479924,1.8006109403131,1.68166288917581,1.92903331528433,3.90148514013002,3.38900753443934,3.29098041204242,5.78483403317739,0,0,0,0,0,0,0,0,0.291480836629851,6.30446026835733,0,0,0.185194527369712,0,0,0,0,0,0,0,0.158167996790568,0.406638934253697,0.756037385752609,0.627264888043406,0.218362563746178,0.404593039154462,0.247960367176008,0.523511883968059,0.648074866458964,0,0,0,0.165458490457098,0.194451188344048,0.129159823477731,0,0,0.13020438484395,0,0.241584120826006,0,1.26404448251271,0,0,0,0,0,0.120195449519969,0.295379054349154,0.504832249740738,0.0762068066549998,0.100826185136841,0.194915761479505,0.192423683280659,0.584384510907845,0,0,0,0,0.386379188064381,0,0.915758121336325,0.857473516316263,0,60.9931990026432,54.778703144354,45.8316410751517,53.4463397088868,26.718218271055,22.661816921691,27.0009000092722,27.0192721934532,23.1102628581944,21.7459330935764,0.207574695168353,2.79317411380722,1.87806966329548,1.45864030240976,0.419226325255965,1.2869045591501,1.77797382241292,1.23621034343337,1.28367683836726,1.26348605881899,1.2673964994512,0.943131706930381,1.31098110457835,1.85672941974121,1.66562859971278,2.85776214769844,1.27472758539341,1.35036454324594,0.824171801606613,1.03039244094078,1.37147700954166,1.06485483695602,0.715308569841963,2.0348498328526,1.59985946706062,1.4384483341585,1.09756783723664,0.789209134313529,1.62964936615034,1.12228454331548,1.18635018124174,0.689531376628944,2.04615521584845,1.08455788830176,1.92906610981141,3.99696924700713,1.40358965067245,1.71896843238639,0.191288332068843,0.220591419119515,0.695603506861264 | |||
|short_description=p3@Dpp6 | |||
}} |
Revision as of 05:51, 4 August 2015
Short description: | p3@Dpp6 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Dpp6_5end |
Coexpression cluster: | MCL_coexpression_mm9:2 |
Association with transcript: | 93bp_to_ENSMUST00000101471, ENSMUST00000148039_5end |
EntrezGene: | 13483 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 5.71e-13 | 23 |
neuroblast (sensu Vertebrata) | 5.71e-13 | 23 |
neuron | 7.43e-10 | 33 |
neuronal stem cell | 7.43e-10 | 33 |
neuroblast | 7.43e-10 | 33 |
electrically signaling cell | 7.43e-10 | 33 |
electrically responsive cell | 2.45e-07 | 39 |
electrically active cell | 2.45e-07 | 39 |