FFCP PHASE1:Mm9::chr10:32609709..32609725,-: Difference between revisions
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{{FFCP|EntrezGene=432450|HGNC=|MCL_coexpression_id=20|UniProt=Q4PNJ2|association_with_transcript=0bp_to_NM_001013411,NM_001025286,uc007etw.2,uc007ety.2_5end|description=CAGE_peak_5_at_Nkain2_5end|id=chr10:32609709..32609725,-|ontology_enrichment_celltype=CL:0000221!4.88e-19!44;CL:0000133!4.88e-19!44;CL:0002319!3.53e-18!43;CL:0000540!1.62e-17!33;CL:0000047!1.62e-17!33;CL:0000031!1.62e-17!33;CL:0000404!1.62e-17!33;CL:0000055!1.43e-14!50;CL:0000393!5.92e-14!39;CL:0000211!5.92e-14!39;CL:0000117!1.67e-12!23;CL:0000337!1.67e-12!23;CL:0002321!2.06e-08!70;CL:0000220!2.06e-08!70|ontology_enrichment_celltype_v019_2=CL:0000540,1.33e-14,33;CL:0000047,1.33e-14,33;CL:0000031,1.33e-14,33;CL:0000404,1.33e-14,33;CL:0000117,2.32e-12,23;CL:0000337,2.32e-12,23;CL:0000393,8.42e-12,39;CL:0000211,8.42e-12,39;CL:0000221,1.32e-11,44;CL:0000133,1.32e-11,44;CL:0002319,2.26e-10,43;CL:0002614,2.69e-08,3;CL:0002610,5.23e-08,3;CL:0002612,3.05e-07,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000073!1.65e-34!75;UBERON:0001016!1.65e-34!75;UBERON:0001017!6.35e-33!73;UBERON:0005743!6.35e-33!73;UBERON:0004121!1.42e-27!102;UBERON:0000924!1.42e-27!102;UBERON:0006601!1.42e-27!102;UBERON:0000955!1.47e-23!50;UBERON:0006238!1.47e-23!50;UBERON:0001049!1.55e-23!52;UBERON:0005068!1.55e-23!52;UBERON:0006241!1.55e-23!52;UBERON:0007135!1.55e-23!52;UBERON:0002616!1.03e-22!49;UBERON:0002020!6.48e-22!34;UBERON:0000033!6.61e-21!63;UBERON:0002346!1.28e-20!71;UBERON:0003075!1.28e-20!71;UBERON:0007284!1.28e-20!71;UBERON:0002791!1.16e-19!29;UBERON:0003528!1.16e-19!29;UBERON:0001893!1.16e-19!29;UBERON:0003080!8.52e-17!40;UBERON:0002780!6.99e-16!39;UBERON:0001890!6.99e-16!39;UBERON:0006240!6.99e-16!39;UBERON:0003056!1.86e-14!49;UBERON:0000956!2.24e-13!21;UBERON:0001869!2.24e-13!21;UBERON:0000203!2.24e-13!21;UBERON:0007811!6.41e-11!86;UBERON:0002619!9.98e-11!17;UBERON:0002021!3.98e-09!10;UBERON:0000411!3.98e-09!10;UBERON:0001950!3.98e-09!10;UBERON:0000153!9.86e-09!94;UBERON:0002420!1.52e-07!8;UBERON:0007245!1.52e-07!8;UBERON:0010009!1.52e-07!8;UBERON:0010011!1.52e-07!8;UBERON:0000454!1.52e-07!8;UBERON:0004111!1.99e-07!122;UBERON:0003076!2.06e-07!12;UBERON:0003057!2.06e-07!12;UBERON:0002298!2.83e-07!6;UBERON:0000010!4.72e-07!11|ontology_enrichment_uberon_v019_2=UBERON:0001017,2.17e-34,73;UBERON:0001016,2.77e-33,75;UBERON:0000073,6.72e-30,54;UBERON:0004121,2.58e-28,95;UBERON:0000924,2.58e-28,95;UBERON:0006601,2.58e-28,95;UBERON:0001049,1.35e-26,52;UBERON:0005068,1.35e-26,52;UBERON:0006241,1.35e-26,52;UBERON:0007135,1.35e-26,52;UBERON:0002346,4.08e-24,64;UBERON:0003075,4.08e-24,64;UBERON:0007284,4.08e-24,64;UBERON:0010371,3.54e-22,73;UBERON:0000955,8.84e-21,47;UBERON:0006238,8.84e-21,47;UBERON:0002616,2.76e-19,46;UBERON:0002020,6.98e-19,34;UBERON:0010314,3.02e-16,92;UBERON:0003076,6.40e-15,12;UBERON:0003057,6.40e-15,12;UBERON:0003080,3.25e-14,40;UBERON:0003528,1.40e-13,29;UBERON:0002791,1.40e-13,29;UBERON:0001893,1.40e-13,29;UBERON:0002780,1.04e-12,39;UBERON:0001890,1.04e-12,39;UBERON:0006240,1.04e-12,39;UBERON:0003056,3.01e-12,49;UBERON:0002021,9.50e-11,10;UBERON:0000411,9.50e-11,10;UBERON:0001950,9.50e-11,10;UBERON:0002950,9.78e-11,4;UBERON:0001891,9.78e-11,4;UBERON:0009616,9.78e-11,4;UBERON:0010286,9.78e-11,4;UBERON:0002240,1.18e-09,6;UBERON:0005174,1.18e-09,6;UBERON:0001137,1.18e-09,6;UBERON:0011216,2.85e-09,194;UBERON:0000025,7.28e-09,114;UBERON:0004111,8.31e-09,122;UBERON:0002038,2.69e-08,3;UBERON:0009663,2.69e-08,3;UBERON:0009661,2.69e-08,3;UBERON:0000125,2.69e-08,3;UBERON:0002308,2.69e-08,3;UBERON:0004684,5.23e-08,3;UBERON:0002275,5.23e-08,3;UBERON:0002619,8.07e-08,17;UBERON:0002420,8.60e-08,8;UBERON:0007245,8.60e-08,8;UBERON:0010009,8.60e-08,8;UBERON:0010011,8.60e-08,8;UBERON:0000454,8.60e-08,8;UBERON:0000956,9.75e-08,21;UBERON:0001869,9.75e-08,21;UBERON:0000203,9.75e-08,21;UBERON:0001948,2.53e-07,5;UBERON:0002315,2.53e-07,5;UBERON:0002257,3.05e-07,3;UBERON:0004733,6.46e-07,6;UBERON:0004732,6.46e-07,6;UBERON:0002028,6.46e-07,6;UBERON:0007277,6.46e-07,6|phase1_expression=0.320297694209588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340173160604279,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101376931219515,0,0,0.436050312760893,0.219686182734472,0.194429899074283,0.139986421625363,0,0,0,0,0,0,0,1.01158230429799,0.528990979272033,0,0,0,0,0,0,0.299600110518405,0,0.829516898467821,0.540023753326763,0.630974884054146,1.42825492201902,0,0.489963196859816,0.383381884072945,0,1.10115880999389,3.44755812830007,4.45458946443106,0.659431438650969,0.365950574409639,2.08365348222704,1.95428099300967,5.06486349028512,3.20876320331301,2.06240009831567,1.13897344639282,1.1183966749518,0.757261933331841,0.831287161174641,0.289864488701678,0,0,0,0,0,0,0,0,0,2.53518155598025,0,0,0,0,0,0,0,0,0,0,0,0,0.150722640552623,0.23517741427141,0,0,0,0,0,0,0,0,2.34224637609238,1.04723353406728,0,0,0,0,4.79330046095433,4.11750542536764,0.753926112677186,2.43354048269187,3.06858548796397,4.1557608911912,3.73154905055843,0,0.124406970610093,0,0,0,0,0,0.30140963567143,0,0,0.281105173679186,1.03481348295606,0,0,0,0,0,0,0,0,0,0,0,0,0.234526059981096,0,0.473489471170421,0,0,0,0,0,0,0,0.0810688095458557,0,0,0,3.99550902271842,0.514523061896422,0,0,0,0.232236671860439,0.128867461322093,0,0,0,0,0,0,0,0,0,0,0,0,0.114248512609729,0,0,0,0,0,0,0,0,0,0,0.196558995113203,0,0,0,0,0,0,0,0,0,0,0.252578877947112,0.358794827043824,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.06422595946285,6.91548950893999,0,0,0.631016438832513,0.390438744296638,1.72338718186239,0.716906393857656,1.11399337041197,2.54768877709949,0,0.584511715822624,1.18586333383957,1.92792789853084,0,0,0,0,0,0,0,0,0,0,0,0,0.712994756769443,0,0,0,0,0,0,0,0,0,0,0.304464949114599,0,0,0.220528398054962,0,0.161464426695906,0.0603129249281559,0.119372344003136,0,0,8.52956389248344,0,0,0,0,0,0,0,0,0,0,0,0,0.216010681643603,0,0.218362563746178,0,0.247960367176008,0.26175594198403,0.129614973291793,0,0,0.448549638131936,0,0,0,0,0,0,0.104859344425711,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.386379188064381,0,0,0.214368379079066,0,1.12950368523413,2.30162618253588,0.572895513439397,0.859265911718438,2.05524755931193,3.7769694869485,1.35004500046361,2.70192721934532,0.906284817968409,1.55328093525546,0,0,0,0,0,0.367687016900028,0,0.206035057238894,0,0,0.25347929989024,0.188626341386076,0.187283014939765,0.320125762024346,0.17230640686684,0.952587382566147,0.347652977834566,0.77163688185482,0,0.588795680537589,0.342869252385415,0.532427418478012,0.238436189947321,0.436039249896986,0.564656282491984,0,0.365855945745545,0,0.407412341537585,0,0.118635018124174,0.29551344712669,0,0.619747364743864,0.385813221962283,0.499621155875892,0,0,0.382576664137687,0.661774257358546,0|short_description=p5@Nkain2}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:432450 | |||
|HGNC= | |||
|MCL_coexpression_id=20 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:Q4PNJ2 | |||
|association_with_transcript=0bp_to_NM_001013411,NM_001025286,uc007etw.2,uc007ety.2_5end | |||
|cluster_id=chr10:32609709..32609725,- | |||
|description=CAGE_peak_5_at_Nkain2_5end | |||
|id=chr10:32609709..32609725,- | |||
|ontology_enrichment_celltype=CL:0000221!4.88e-19!44;CL:0000133!4.88e-19!44;CL:0002319!3.53e-18!43;CL:0000540!1.62e-17!33;CL:0000047!1.62e-17!33;CL:0000031!1.62e-17!33;CL:0000404!1.62e-17!33;CL:0000055!1.43e-14!50;CL:0000393!5.92e-14!39;CL:0000211!5.92e-14!39;CL:0000117!1.67e-12!23;CL:0000337!1.67e-12!23;CL:0002321!2.06e-08!70;CL:0000220!2.06e-08!70 | |||
|ontology_enrichment_celltype_v019_2=CL:0000540,1.33e-14,33;CL:0000047,1.33e-14,33;CL:0000031,1.33e-14,33;CL:0000404,1.33e-14,33;CL:0000117,2.32e-12,23;CL:0000337,2.32e-12,23;CL:0000393,8.42e-12,39;CL:0000211,8.42e-12,39;CL:0000221,1.32e-11,44;CL:0000133,1.32e-11,44;CL:0002319,2.26e-10,43;CL:0002614,2.69e-08,3;CL:0002610,5.23e-08,3;CL:0002612,3.05e-07,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!1.65e-34!75;UBERON:0001016!1.65e-34!75;UBERON:0001017!6.35e-33!73;UBERON:0005743!6.35e-33!73;UBERON:0004121!1.42e-27!102;UBERON:0000924!1.42e-27!102;UBERON:0006601!1.42e-27!102;UBERON:0000955!1.47e-23!50;UBERON:0006238!1.47e-23!50;UBERON:0001049!1.55e-23!52;UBERON:0005068!1.55e-23!52;UBERON:0006241!1.55e-23!52;UBERON:0007135!1.55e-23!52;UBERON:0002616!1.03e-22!49;UBERON:0002020!6.48e-22!34;UBERON:0000033!6.61e-21!63;UBERON:0002346!1.28e-20!71;UBERON:0003075!1.28e-20!71;UBERON:0007284!1.28e-20!71;UBERON:0002791!1.16e-19!29;UBERON:0003528!1.16e-19!29;UBERON:0001893!1.16e-19!29;UBERON:0003080!8.52e-17!40;UBERON:0002780!6.99e-16!39;UBERON:0001890!6.99e-16!39;UBERON:0006240!6.99e-16!39;UBERON:0003056!1.86e-14!49;UBERON:0000956!2.24e-13!21;UBERON:0001869!2.24e-13!21;UBERON:0000203!2.24e-13!21;UBERON:0007811!6.41e-11!86;UBERON:0002619!9.98e-11!17;UBERON:0002021!3.98e-09!10;UBERON:0000411!3.98e-09!10;UBERON:0001950!3.98e-09!10;UBERON:0000153!9.86e-09!94;UBERON:0002420!1.52e-07!8;UBERON:0007245!1.52e-07!8;UBERON:0010009!1.52e-07!8;UBERON:0010011!1.52e-07!8;UBERON:0000454!1.52e-07!8;UBERON:0004111!1.99e-07!122;UBERON:0003076!2.06e-07!12;UBERON:0003057!2.06e-07!12;UBERON:0002298!2.83e-07!6;UBERON:0000010!4.72e-07!11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,2.17e-34,73;UBERON:0001016,2.77e-33,75;UBERON:0000073,6.72e-30,54;UBERON:0004121,2.58e-28,95;UBERON:0000924,2.58e-28,95;UBERON:0006601,2.58e-28,95;UBERON:0001049,1.35e-26,52;UBERON:0005068,1.35e-26,52;UBERON:0006241,1.35e-26,52;UBERON:0007135,1.35e-26,52;UBERON:0002346,4.08e-24,64;UBERON:0003075,4.08e-24,64;UBERON:0007284,4.08e-24,64;UBERON:0010371,3.54e-22,73;UBERON:0000955,8.84e-21,47;UBERON:0006238,8.84e-21,47;UBERON:0002616,2.76e-19,46;UBERON:0002020,6.98e-19,34;UBERON:0010314,3.02e-16,92;UBERON:0003076,6.40e-15,12;UBERON:0003057,6.40e-15,12;UBERON:0003080,3.25e-14,40;UBERON:0003528,1.40e-13,29;UBERON:0002791,1.40e-13,29;UBERON:0001893,1.40e-13,29;UBERON:0002780,1.04e-12,39;UBERON:0001890,1.04e-12,39;UBERON:0006240,1.04e-12,39;UBERON:0003056,3.01e-12,49;UBERON:0002021,9.50e-11,10;UBERON:0000411,9.50e-11,10;UBERON:0001950,9.50e-11,10;UBERON:0002950,9.78e-11,4;UBERON:0001891,9.78e-11,4;UBERON:0009616,9.78e-11,4;UBERON:0010286,9.78e-11,4;UBERON:0002240,1.18e-09,6;UBERON:0005174,1.18e-09,6;UBERON:0001137,1.18e-09,6;UBERON:0011216,2.85e-09,194;UBERON:0000025,7.28e-09,114;UBERON:0004111,8.31e-09,122;UBERON:0002038,2.69e-08,3;UBERON:0009663,2.69e-08,3;UBERON:0009661,2.69e-08,3;UBERON:0000125,2.69e-08,3;UBERON:0002308,2.69e-08,3;UBERON:0004684,5.23e-08,3;UBERON:0002275,5.23e-08,3;UBERON:0002619,8.07e-08,17;UBERON:0002420,8.60e-08,8;UBERON:0007245,8.60e-08,8;UBERON:0010009,8.60e-08,8;UBERON:0010011,8.60e-08,8;UBERON:0000454,8.60e-08,8;UBERON:0000956,9.75e-08,21;UBERON:0001869,9.75e-08,21;UBERON:0000203,9.75e-08,21;UBERON:0001948,2.53e-07,5;UBERON:0002315,2.53e-07,5;UBERON:0002257,3.05e-07,3;UBERON:0004733,6.46e-07,6;UBERON:0004732,6.46e-07,6;UBERON:0002028,6.46e-07,6;UBERON:0007277,6.46e-07,6 | |||
|phase1_expression=0.320297694209588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340173160604279,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101376931219515,0,0,0.436050312760893,0.219686182734472,0.194429899074283,0.139986421625363,0,0,0,0,0,0,0,1.01158230429799,0.528990979272033,0,0,0,0,0,0,0.299600110518405,0,0.829516898467821,0.540023753326763,0.630974884054146,1.42825492201902,0,0.489963196859816,0.383381884072945,0,1.10115880999389,3.44755812830007,4.45458946443106,0.659431438650969,0.365950574409639,2.08365348222704,1.95428099300967,5.06486349028512,3.20876320331301,2.06240009831567,1.13897344639282,1.1183966749518,0.757261933331841,0.831287161174641,0.289864488701678,0,0,0,0,0,0,0,0,0,2.53518155598025,0,0,0,0,0,0,0,0,0,0,0,0,0.150722640552623,0.23517741427141,0,0,0,0,0,0,0,0,2.34224637609238,1.04723353406728,0,0,0,0,4.79330046095433,4.11750542536764,0.753926112677186,2.43354048269187,3.06858548796397,4.1557608911912,3.73154905055843,0,0.124406970610093,0,0,0,0,0,0.30140963567143,0,0,0.281105173679186,1.03481348295606,0,0,0,0,0,0,0,0,0,0,0,0,0.234526059981096,0,0.473489471170421,0,0,0,0,0,0,0,0.0810688095458557,0,0,0,3.99550902271842,0.514523061896422,0,0,0,0.232236671860439,0.128867461322093,0,0,0,0,0,0,0,0,0,0,0,0,0.114248512609729,0,0,0,0,0,0,0,0,0,0,0.196558995113203,0,0,0,0,0,0,0,0,0,0,0.252578877947112,0.358794827043824,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.06422595946285,6.91548950893999,0,0,0.631016438832513,0.390438744296638,1.72338718186239,0.716906393857656,1.11399337041197,2.54768877709949,0,0.584511715822624,1.18586333383957,1.92792789853084,0,0,0,0,0,0,0,0,0,0,0,0,0.712994756769443,0,0,0,0,0,0,0,0,0,0,0.304464949114599,0,0,0.220528398054962,0,0.161464426695906,0.0603129249281559,0.119372344003136,0,0,8.52956389248344,0,0,0,0,0,0,0,0,0,0,0,0,0.216010681643603,0,0.218362563746178,0,0.247960367176008,0.26175594198403,0.129614973291793,0,0,0.448549638131936,0,0,0,0,0,0,0.104859344425711,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.386379188064381,0,0,0.214368379079066,0,1.12950368523413,2.30162618253588,0.572895513439397,0.859265911718438,2.05524755931193,3.7769694869485,1.35004500046361,2.70192721934532,0.906284817968409,1.55328093525546,0,0,0,0,0,0.367687016900028,0,0.206035057238894,0,0,0.25347929989024,0.188626341386076,0.187283014939765,0.320125762024346,0.17230640686684,0.952587382566147,0.347652977834566,0.77163688185482,0,0.588795680537589,0.342869252385415,0.532427418478012,0.238436189947321,0.436039249896986,0.564656282491984,0,0.365855945745545,0,0.407412341537585,0,0.118635018124174,0.29551344712669,0,0.619747364743864,0.385813221962283,0.499621155875892,0,0,0.382576664137687,0.661774257358546,0 | |||
|short_description=p5@Nkain2 | |||
}} |
Revision as of 07:40, 4 August 2015
Short description: | p5@Nkain2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_Nkain2_5end |
Coexpression cluster: | MCL_coexpression_mm9:20 |
Association with transcript: | 0bp_to_NM_001013411, NM_001025286, uc007etw.2, uc007ety.2_5end |
EntrezGene: | 432450 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron | 1.33e-14 | 33 |
neuronal stem cell | 1.33e-14 | 33 |
neuroblast | 1.33e-14 | 33 |
electrically signaling cell | 1.33e-14 | 33 |
CNS neuron (sensu Vertebrata) | 2.32e-12 | 23 |
neuroblast (sensu Vertebrata) | 2.32e-12 | 23 |
electrically responsive cell | 8.42e-12 | 39 |
electrically active cell | 8.42e-12 | 39 |
ectodermal cell | 1.32e-11 | 44 |
neurectodermal cell | 1.32e-11 | 44 |
neural cell | 2.26e-10 | 43 |
neuron of the substantia nigra | 2.69e-08 | 3 |
raphe nuclei neuron | 5.23e-08 | 3 |
neuron of the ventral spinal cord | 3.05e-07 | 3 |