FFCP PHASE1:Mm9::chr11:93905645..93905656,+: Difference between revisions
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{{FFCP|EntrezGene=70834|HGNC=|UniProt=F8WH31|association_with_transcript=-22bp_to_ENSMUST00000024979_5end|description=CAGE_peak_6_at_Spag9_5end|id=chr11:93905645..93905656,+|ontology_enrichment_celltype=CL:0000540!2.19e-14!33;CL:0000047!2.19e-14!33;CL:0000031!2.19e-14!33;CL:0000404!2.19e-14!33;CL:0000221!3.34e-13!44;CL:0000133!3.34e-13!44;CL:0002319!1.04e-12!43;CL:0000117!7.03e-12!23;CL:0000337!7.03e-12!23;CL:0000393!6.58e-10!39;CL:0000211!6.58e-10!39;CL:0000055!1.05e-08!50|ontology_enrichment_celltype_v019_2=CL:0000117,2.16e-19,23;CL:0000337,2.16e-19,23;CL:0000540,9.57e-15,33;CL:0000047,9.57e-15,33;CL:0000031,9.57e-15,33;CL:0000404,9.57e-15,33;CL:0000221,4.05e-13,44;CL:0000133,4.05e-13,44;CL:0002319,2.64e-12,43;CL:0000393,1.36e-11,39;CL:0000211,1.36e-11,39;CL:0002609,4.24e-10,6|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000073!5.55e-26!75;UBERON:0001016!5.55e-26!75;UBERON:0004121!6.11e-26!102;UBERON:0000924!6.11e-26!102;UBERON:0006601!6.11e-26!102;UBERON:0001017!2.43e-25!73;UBERON:0005743!2.43e-25!73;UBERON:0002346!1.50e-22!71;UBERON:0003075!1.50e-22!71;UBERON:0007284!1.50e-22!71;UBERON:0000033!2.84e-22!63;UBERON:0003056!3.03e-19!49;UBERON:0000955!7.02e-19!50;UBERON:0006238!7.02e-19!50;UBERON:0002616!8.14e-19!49;UBERON:0001049!2.22e-18!52;UBERON:0005068!2.22e-18!52;UBERON:0006241!2.22e-18!52;UBERON:0007135!2.22e-18!52;UBERON:0003080!8.58e-15!40;UBERON:0002020!1.12e-14!34;UBERON:0002791!3.25e-14!29;UBERON:0003528!3.25e-14!29;UBERON:0001893!3.25e-14!29;UBERON:0002780!4.27e-14!39;UBERON:0001890!4.27e-14!39;UBERON:0006240!4.27e-14!39;UBERON:0007811!1.30e-10!86;UBERON:0000956!9.21e-10!21;UBERON:0001869!9.21e-10!21;UBERON:0000203!9.21e-10!21;UBERON:0000153!1.20e-09!94;UBERON:0002619!2.80e-07!17|ontology_enrichment_uberon_v019_2=UBERON:0002346,6.33e-36,64;UBERON:0003075,6.33e-36,64;UBERON:0007284,6.33e-36,64;UBERON:0004121,4.79e-33,95;UBERON:0000924,4.79e-33,95;UBERON:0006601,4.79e-33,95;UBERON:0010371,1.23e-31,73;UBERON:0003056,5.87e-31,49;UBERON:0000073,6.67e-29,54;UBERON:0001016,8.70e-28,75;UBERON:0001017,2.27e-27,73;UBERON:0001049,1.16e-26,52;UBERON:0005068,1.16e-26,52;UBERON:0006241,1.16e-26,52;UBERON:0007135,1.16e-26,52;UBERON:0002616,3.29e-25,46;UBERON:0000955,1.77e-24,47;UBERON:0006238,1.77e-24,47;UBERON:0010314,6.72e-24,92;UBERON:0003528,2.21e-22,29;UBERON:0002791,2.21e-22,29;UBERON:0001893,2.21e-22,29;UBERON:0002020,7.97e-22,34;UBERON:0003080,1.84e-21,40;UBERON:0002780,3.86e-20,39;UBERON:0001890,3.86e-20,39;UBERON:0006240,3.86e-20,39;UBERON:0000956,1.62e-13,21;UBERON:0001869,1.62e-13,21;UBERON:0000203,1.62e-13,21;UBERON:0000970,1.25e-10,9;UBERON:0000019,1.25e-10,9;UBERON:0000047,1.25e-10,9;UBERON:0010312,1.25e-10,9;UBERON:0004088,1.25e-10,9;UBERON:0002104,1.25e-10,9;UBERON:0001456,1.25e-10,9;UBERON:0003072,1.25e-10,9;UBERON:0004128,1.25e-10,9;UBERON:0003071,1.25e-10,9;UBERON:0002420,1.71e-10,8;UBERON:0007245,1.71e-10,8;UBERON:0010009,1.71e-10,8;UBERON:0010011,1.71e-10,8;UBERON:0000454,1.71e-10,8;UBERON:0000020,2.45e-09,12;UBERON:0001032,2.45e-09,12;UBERON:0004456,2.45e-09,12;UBERON:0002619,7.63e-09,17;UBERON:0000033,1.84e-08,13;UBERON:0005085,1.84e-08,13;UBERON:0001444,2.24e-08,11;UBERON:0000025,9.46e-08,114;UBERON:0004111,2.83e-07,122;UBERON:0000483,4.68e-07,174;UBERON:0000369,6.29e-07,5;UBERON:0002435,6.29e-07,5;UBERON:0000204,6.29e-07,5;UBERON:0010082,6.29e-07,5;UBERON:0000119,7.52e-07,176|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.680346321208558,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.436050312760893,0,0,0.419959264876088,1.43752564364972,0,0,0,0,0,0,2.42779753031517,1.05798195854407,0.633831403506179,0.338844532069132,0,0,0,0,0,0.384218305321555,4.14758449233911,2.43010688997043,2.3135745748652,0,0.662605622854841,4.5321595709533,3.1629005436018,3.67687514644008,1.10115880999389,2.80912143787413,4.45458946443106,1.97829431595291,1.09785172322892,1.04182674111352,1.3959149950069,3.37657566019008,2.13917546887534,0.294628585473668,2.42031857358475,1.3047961207771,0.302904773332736,1.28471652181535,0,0,0,0,0,0,0.280888840263504,0,0,0,1.40843419776681,0,0,0,0,0,0,0.22836775943812,0,0.148442139064825,0.346970653532272,0.304465478312141,0.230615497256059,0,0.117588707135705,0,0,0,0,0.647067399789637,0.220841518460394,0,0,1.46390398505774,3.77004072264219,0,0,0,0,3.74476598512057,3.20250421973039,2.26177833803156,2.78118912307642,1.79000820131231,2.90903262383384,3.0825839982874,0.101839363850316,0.124406970610093,0,0,1.43132487258974,2.06911893990126,3.96136685571768,3.16480117455002,4.35433594568498,4.61209393025459,3.65436725782942,1.29351685369508,0,0.378212160335639,0,0.43839146485515,0.278047249225598,0,0.205782136407943,0.199034266818493,0,0,0,0.828503090142008,0.469052119962192,1.44049649168812,0.473489471170421,0.196764231747404,0.308534225774757,0,0.268273401399619,0.116765342367169,0,0,0.162137619091711,0,0,0,1.68231958851302,2.57261530948211,0,0,0,0.232236671860439,0,0.403367049246685,0.222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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:70834 | |||
|HGNC= | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:F8WH31 | |||
|association_with_transcript=-22bp_to_ENSMUST00000024979_5end | |||
|cluster_id=chr11:93905645..93905656,+ | |||
|description=CAGE_peak_6_at_Spag9_5end | |||
|id=chr11:93905645..93905656,+ | |||
|ontology_enrichment_celltype=CL:0000540!2.19e-14!33;CL:0000047!2.19e-14!33;CL:0000031!2.19e-14!33;CL:0000404!2.19e-14!33;CL:0000221!3.34e-13!44;CL:0000133!3.34e-13!44;CL:0002319!1.04e-12!43;CL:0000117!7.03e-12!23;CL:0000337!7.03e-12!23;CL:0000393!6.58e-10!39;CL:0000211!6.58e-10!39;CL:0000055!1.05e-08!50 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,2.16e-19,23;CL:0000337,2.16e-19,23;CL:0000540,9.57e-15,33;CL:0000047,9.57e-15,33;CL:0000031,9.57e-15,33;CL:0000404,9.57e-15,33;CL:0000221,4.05e-13,44;CL:0000133,4.05e-13,44;CL:0002319,2.64e-12,43;CL:0000393,1.36e-11,39;CL:0000211,1.36e-11,39;CL:0002609,4.24e-10,6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!5.55e-26!75;UBERON:0001016!5.55e-26!75;UBERON:0004121!6.11e-26!102;UBERON:0000924!6.11e-26!102;UBERON:0006601!6.11e-26!102;UBERON:0001017!2.43e-25!73;UBERON:0005743!2.43e-25!73;UBERON:0002346!1.50e-22!71;UBERON:0003075!1.50e-22!71;UBERON:0007284!1.50e-22!71;UBERON:0000033!2.84e-22!63;UBERON:0003056!3.03e-19!49;UBERON:0000955!7.02e-19!50;UBERON:0006238!7.02e-19!50;UBERON:0002616!8.14e-19!49;UBERON:0001049!2.22e-18!52;UBERON:0005068!2.22e-18!52;UBERON:0006241!2.22e-18!52;UBERON:0007135!2.22e-18!52;UBERON:0003080!8.58e-15!40;UBERON:0002020!1.12e-14!34;UBERON:0002791!3.25e-14!29;UBERON:0003528!3.25e-14!29;UBERON:0001893!3.25e-14!29;UBERON:0002780!4.27e-14!39;UBERON:0001890!4.27e-14!39;UBERON:0006240!4.27e-14!39;UBERON:0007811!1.30e-10!86;UBERON:0000956!9.21e-10!21;UBERON:0001869!9.21e-10!21;UBERON:0000203!9.21e-10!21;UBERON:0000153!1.20e-09!94;UBERON:0002619!2.80e-07!17 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002346,6.33e-36,64;UBERON:0003075,6.33e-36,64;UBERON:0007284,6.33e-36,64;UBERON:0004121,4.79e-33,95;UBERON:0000924,4.79e-33,95;UBERON:0006601,4.79e-33,95;UBERON:0010371,1.23e-31,73;UBERON:0003056,5.87e-31,49;UBERON:0000073,6.67e-29,54;UBERON:0001016,8.70e-28,75;UBERON:0001017,2.27e-27,73;UBERON:0001049,1.16e-26,52;UBERON:0005068,1.16e-26,52;UBERON:0006241,1.16e-26,52;UBERON:0007135,1.16e-26,52;UBERON:0002616,3.29e-25,46;UBERON:0000955,1.77e-24,47;UBERON:0006238,1.77e-24,47;UBERON:0010314,6.72e-24,92;UBERON:0003528,2.21e-22,29;UBERON:0002791,2.21e-22,29;UBERON:0001893,2.21e-22,29;UBERON:0002020,7.97e-22,34;UBERON:0003080,1.84e-21,40;UBERON:0002780,3.86e-20,39;UBERON:0001890,3.86e-20,39;UBERON:0006240,3.86e-20,39;UBERON:0000956,1.62e-13,21;UBERON:0001869,1.62e-13,21;UBERON:0000203,1.62e-13,21;UBERON:0000970,1.25e-10,9;UBERON:0000019,1.25e-10,9;UBERON:0000047,1.25e-10,9;UBERON:0010312,1.25e-10,9;UBERON:0004088,1.25e-10,9;UBERON:0002104,1.25e-10,9;UBERON:0001456,1.25e-10,9;UBERON:0003072,1.25e-10,9;UBERON:0004128,1.25e-10,9;UBERON:0003071,1.25e-10,9;UBERON:0002420,1.71e-10,8;UBERON:0007245,1.71e-10,8;UBERON:0010009,1.71e-10,8;UBERON:0010011,1.71e-10,8;UBERON:0000454,1.71e-10,8;UBERON:0000020,2.45e-09,12;UBERON:0001032,2.45e-09,12;UBERON:0004456,2.45e-09,12;UBERON:0002619,7.63e-09,17;UBERON:0000033,1.84e-08,13;UBERON:0005085,1.84e-08,13;UBERON:0001444,2.24e-08,11;UBERON:0000025,9.46e-08,114;UBERON:0004111,2.83e-07,122;UBERON:0000483,4.68e-07,174;UBERON:0000369,6.29e-07,5;UBERON:0002435,6.29e-07,5;UBERON:0000204,6.29e-07,5;UBERON:0010082,6.29e-07,5;UBERON:0000119,7.52e-07,176 | |||
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|short_description=p6@Spag9 | |||
}} |
Revision as of 08:28, 4 August 2015
Short description: | p6@Spag9 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_6_at_Spag9_5end |
Coexpression cluster: | NA |
Association with transcript: | -22bp_to_ENSMUST00000024979_5end |
EntrezGene: | 70834 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 2.16e-19 | 23 |
neuroblast (sensu Vertebrata) | 2.16e-19 | 23 |
neuron | 9.57e-15 | 33 |
neuronal stem cell | 9.57e-15 | 33 |
neuroblast | 9.57e-15 | 33 |
electrically signaling cell | 9.57e-15 | 33 |
ectodermal cell | 4.05e-13 | 44 |
neurectodermal cell | 4.05e-13 | 44 |
neural cell | 2.64e-12 | 43 |
electrically responsive cell | 1.36e-11 | 39 |
electrically active cell | 1.36e-11 | 39 |
neuron of cerebral cortex | 4.24e-10 | 6 |