FFCP PHASE1:Mm9::chr14:60796404..60796455,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|EntrezGene=50769|HGNC=|MCL_coexpression_id=1|UniProt=D3Z2Z6|association_with_transcript=-28bp_to_ENSMUST00000140924_5end|description=CAGE_peak_3_at_Atp8a2_5end|id=chr14:60796404..60796455,-|ontology_enrichment_celltype=CL:0000117!1.54e-10!23;CL:0000337!1.54e-10!23;CL:0000540!7.35e-07!33;CL:0000047!7.35e-07!33;CL:0000031!7.35e-07!33;CL:0000404!7.35e-07!33|ontology_enrichment_celltype_v019_2=CL:0000117,4.43e-15,23;CL:0000337,4.43e-15,23;CL:0000540,2.33e-09,33;CL:0000047,2.33e-09,33;CL:0000031,2.33e-09,33;CL:0000404,2.33e-09,33;CL:0000393,7.92e-07,39;CL:0000211,7.92e-07,39|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001049!2.12e-19!52;UBERON:0005068!2.12e-19!52;UBERON:0006241!2.12e-19!52;UBERON:0007135!2.12e-19!52;UBERON:0000955!1.60e-18!50;UBERON:0006238!1.60e-18!50;UBERON:0002616!6.34e-18!49;UBERON:0000033!8.04e-17!63;UBERON:0002020!1.04e-16!34;UBERON:0001017!1.97e-15!73;UBERON:0005743!1.97e-15!73;UBERON:0000073!1.59e-14!75;UBERON:0001016!1.59e-14!75;UBERON:0003080!4.48e-14!40;UBERON:0002791!6.79e-14!29;UBERON:0003528!6.79e-14!29;UBERON:0001893!6.79e-14!29;UBERON:0002346!6.84e-14!71;UBERON:0003075!6.84e-14!71;UBERON:0007284!6.84e-14!71;UBERON:0002780!1.84e-13!39;UBERON:0001890!1.84e-13!39;UBERON:0006240!1.84e-13!39;UBERON:0003056!6.21e-13!49;UBERON:0000956!1.64e-09!21;UBERON:0001869!1.64e-09!21;UBERON:0000203!1.64e-09!21;UBERON:0004121!2.15e-09!102;UBERON:0000924!2.15e-09!102;UBERON:0006601!2.15e-09!102;UBERON:0000160!1.76e-08!43;UBERON:0005409!4.15e-08!59;UBERON:0000025!4.68e-08!114;UBERON:0004111!5.40e-08!122;UBERON:0002021!6.81e-08!10;UBERON:0000411!6.81e-08!10;UBERON:0001950!6.81e-08!10;UBERON:0002619!7.24e-08!17;UBERON:0007811!1.20e-07!86|ontology_enrichment_uberon_v019_2=UBERON:0000073,5.05e-26,54;UBERON:0001049,5.25e-24,52;UBERON:0005068,5.25e-24,52;UBERON:0006241,5.25e-24,52;UBERON:0007135,5.25e-24,52;UBERON:0002020,1.16e-23,34;UBERON:0002346,5.64e-21,64;UBERON:0003075,5.64e-21,64;UBERON:0007284,5.64e-21,64;UBERON:0010314,1.25e-20,92;UBERON:0001017,1.52e-20,73;UBERON:0000955,8.30e-20,47;UBERON:0006238,8.30e-20,47;UBERON:0003528,1.45e-19,29;UBERON:0002791,1.45e-19,29;UBERON:0001893,1.45e-19,29;UBERON:0001016,1.60e-19,75;UBERON:0002616,5.29e-19,46;UBERON:0010371,1.29e-18,73;UBERON:0003080,6.31e-17,40;UBERON:0002780,4.46e-16,39;UBERON:0001890,4.46e-16,39;UBERON:0006240,4.46e-16,39;UBERON:0004121,6.06e-16,95;UBERON:0000924,6.06e-16,95;UBERON:0006601,6.06e-16,95;UBERON:0003056,6.87e-16,49;UBERON:0000956,3.39e-13,21;UBERON:0001869,3.39e-13,21;UBERON:0000203,3.39e-13,21;UBERON:0011216,1.45e-11,194;UBERON:0002619,8.17e-11,17;UBERON:0002021,9.44e-11,10;UBERON:0000411,9.44e-11,10;UBERON:0001950,9.44e-11,10;UBERON:0004111,1.33e-09,122;UBERON:0000160,1.47e-09,31;UBERON:0000025,2.25e-09,114;UBERON:0005409,3.93e-08,47;UBERON:0003076,9.31e-08,12;UBERON:0003057,9.31e-08,12;UBERON:0002420,1.20e-07,8;UBERON:0007245,1.20e-07,8;UBERON:0010009,1.20e-07,8;UBERON:0010011,1.20e-07,8;UBERON:0000454,1.20e-07,8;UBERON:0000483,8.59e-07,174|phase1_expression=3.52327463630547,1.74487703819681,1.36499771816861,0.90739263392049,1.00179145989269,1.51091344720701,0.467225281191051,0,0.140788722151667,0,0,0,0.171200729931206,0,0,0,0,0,0,0,1.61582251287033,0,0,1.27993938234725,0.45881856213434,1.14846392823004,2.15380998079537,0.430942465371778,1.52018735565099,3.02436155711917,1.10865255327652,0,0,0,2.02196133825892,2.1610503896604,1.42918549383658,0,0,0,0.588231488031014,0,0.971020706062307,0,0,0,0.782391344348039,0,0.219686182734472,0,0,0,0,0,0,0,0,0,1.61853168687678,1.5869729378161,0,0.338844532069132,0,0,0,0,0,0,2.07379224616955,1.62007125998029,2.10324961351382,5.14171771926846,2.42955395046775,1.83736198822431,1.15014565221884,1.83843757322004,13.2139057199266,9.19348834213351,11.5204899942183,2.2420668914133,2.65314166446988,2.6045668527838,13.4007839520663,5.6276261003168,8.40390362772456,3.53554302568401,6.12198227436143,3.72798891650601,0.075726193333184,0,0,0,0,0,0,0,0.421333260395256,0,0,0,2.53518155598025,0,0,0,0,0,0,0.22836775943812,0,0.445326417194474,0.173485326766136,0,0,0,0.470354828542819,0.125666591329675,0.247194967734374,0.289198713839823,0,0,0,0,5.59175283654366,5.27005434620785,4.39838084308256,2.29911349687732,0,0,0,6.74057877321702,5.49000723382352,2.38743269014442,8.16974304903699,7.16003280524926,6.02585329222724,8.4365456795234,0.305518091550949,0,0,2.10441855886474,0,0,0,0.150704817835715,0.612328492361951,1.40925092313335,1.96773621575431,3.10444044886819,0,0,0.351902248327898,0,0,0,0,0,0,0,0,1.24275463521301,0.469052119962192,2.52086886045421,2.13070262026689,1.57411385397923,1.54267112887378,1.86027155800326,1.3413670069981,1.40118410840603,0.987359099480883,1.31333971263276,1.29710095273369,0.877199924551994,1.3173006917463,1.34206418760372,2.94405927989778,2.88132914661996,1.65209391491899,1.32225283331772,0.213288250535234,0.232236671860439,0.902072229254653,1.21010114774006,1.11189021922435,2.47293313946327,1.42358718463353,1.81168850196412,2.01068167040216,1.98956472041151,1.9496408711912,1.79763881730844,3.02593269824572,1.7922714592893,0,0.228497025219458,0,0,0,0.140271639780637,0.0632365371242573,0,0,0,0,0,0.589676985339609,0,0.202860121388503,0,0.25462585178142,0.287696137450811,0,0.274561413188081,0,1.86070473834252,0.624075346229121,0,0.179397413521912,0.482443521363367,0.369506380333209,0.189491411770485,0.162964976442026,0,0,0.167506257441816,0.238043640886014,0.390267295715598,0,0,0.159454768657487,0.491589944147214,0,0.144649058581512,0,0,0,0,9.9541365792431,12.0728037189969,0,0,0,0,0.215423397732799,0.238968797952552,0.668396022247182,0,0,0.876767573733936,0,4.4984984299053,0.425820255624806,0,0,0.329940245945071,1.32745138339963,0,0,0.377210159511796,0.295301892880773,0.922305443831782,0.516856586336442,1.09060118843252,0.356497378384721,0.316036757935816,2.10837217149998,2.06271086496374,2.38307724027652,0.18006109403131,0.129358683782755,0.214337035031592,0.532020700926821,0.178368817602071,0.493647061806363,0.304464949114599,0,0.21183207086382,0.220528398054962,0,0,0.0603129249281559,0,0.164140899745061,2.33184669303881,14.6485988588303,0.170870880797853,0.412773735926445,0,0,0,0,0,0,0.276399947608848,2.86401185404534,0,0.609958401380546,1.08005340821801,0.836353184057875,0.655087691238533,1.61837215661785,2.39695021603474,3.92633912976044,3.6292192521702,0,0,0,0,0,0.258319646955462,0,0.58678619322877,0.911430693907651,1.78260885523708,0.483168241652012,0,0.316011120628178,0.405450430580328,0.102710957164827,0.129920822977795,0,0,0.120195449519969,0.147689527174577,0,0,0,0,0,0,0,0,0,0,2.12508553435409,0.187682475451182,0,0.214368379079066,0,6.7770221114048,9.66682996665071,4.01026859407578,10.6548973053086,6.16574267793578,6.7985450765073,6.07520250208625,9.45674526770863,7.25027854374727,8.80192529978094,0,0,0,0.243106717068294,0.209613162627982,0,0.666740183404846,0.412070114477788,0.320919209591815,0.758091635291392,0,0.754505365544305,0.749132059759059,0.320125762024346,0.459483751644906,0.476293691283074,0.811190281613988,0.38581844092741,0.824171801606613,0.588795680537589,0.342869252385415,0.532427418478012,1.1921809497366,0.290692833264657,0.658765662907314,0.761531471025089,0.73171189149109,0.526139422875686,0.543216455383447,0.561142271657738,0.949080144993393,0.788035859004508,1.63692417267876,1.23949472948773,0.385813221962283,0.999242311751784,1.16965804222704,0.644613162144895,0.191288332068843,0.220591419119515,0.231867835620421|short_description=p3@Atp8a2}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:50769 | |||
|HGNC= | |||
|MCL_coexpression_id=1 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:D3Z2Z6 | |||
|association_with_transcript=-28bp_to_ENSMUST00000140924_5end | |||
|cluster_id=chr14:60796404..60796455,- | |||
|description=CAGE_peak_3_at_Atp8a2_5end | |||
|id=chr14:60796404..60796455,- | |||
|ontology_enrichment_celltype=CL:0000117!1.54e-10!23;CL:0000337!1.54e-10!23;CL:0000540!7.35e-07!33;CL:0000047!7.35e-07!33;CL:0000031!7.35e-07!33;CL:0000404!7.35e-07!33 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,4.43e-15,23;CL:0000337,4.43e-15,23;CL:0000540,2.33e-09,33;CL:0000047,2.33e-09,33;CL:0000031,2.33e-09,33;CL:0000404,2.33e-09,33;CL:0000393,7.92e-07,39;CL:0000211,7.92e-07,39 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!2.12e-19!52;UBERON:0005068!2.12e-19!52;UBERON:0006241!2.12e-19!52;UBERON:0007135!2.12e-19!52;UBERON:0000955!1.60e-18!50;UBERON:0006238!1.60e-18!50;UBERON:0002616!6.34e-18!49;UBERON:0000033!8.04e-17!63;UBERON:0002020!1.04e-16!34;UBERON:0001017!1.97e-15!73;UBERON:0005743!1.97e-15!73;UBERON:0000073!1.59e-14!75;UBERON:0001016!1.59e-14!75;UBERON:0003080!4.48e-14!40;UBERON:0002791!6.79e-14!29;UBERON:0003528!6.79e-14!29;UBERON:0001893!6.79e-14!29;UBERON:0002346!6.84e-14!71;UBERON:0003075!6.84e-14!71;UBERON:0007284!6.84e-14!71;UBERON:0002780!1.84e-13!39;UBERON:0001890!1.84e-13!39;UBERON:0006240!1.84e-13!39;UBERON:0003056!6.21e-13!49;UBERON:0000956!1.64e-09!21;UBERON:0001869!1.64e-09!21;UBERON:0000203!1.64e-09!21;UBERON:0004121!2.15e-09!102;UBERON:0000924!2.15e-09!102;UBERON:0006601!2.15e-09!102;UBERON:0000160!1.76e-08!43;UBERON:0005409!4.15e-08!59;UBERON:0000025!4.68e-08!114;UBERON:0004111!5.40e-08!122;UBERON:0002021!6.81e-08!10;UBERON:0000411!6.81e-08!10;UBERON:0001950!6.81e-08!10;UBERON:0002619!7.24e-08!17;UBERON:0007811!1.20e-07!86 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,5.05e-26,54;UBERON:0001049,5.25e-24,52;UBERON:0005068,5.25e-24,52;UBERON:0006241,5.25e-24,52;UBERON:0007135,5.25e-24,52;UBERON:0002020,1.16e-23,34;UBERON:0002346,5.64e-21,64;UBERON:0003075,5.64e-21,64;UBERON:0007284,5.64e-21,64;UBERON:0010314,1.25e-20,92;UBERON:0001017,1.52e-20,73;UBERON:0000955,8.30e-20,47;UBERON:0006238,8.30e-20,47;UBERON:0003528,1.45e-19,29;UBERON:0002791,1.45e-19,29;UBERON:0001893,1.45e-19,29;UBERON:0001016,1.60e-19,75;UBERON:0002616,5.29e-19,46;UBERON:0010371,1.29e-18,73;UBERON:0003080,6.31e-17,40;UBERON:0002780,4.46e-16,39;UBERON:0001890,4.46e-16,39;UBERON:0006240,4.46e-16,39;UBERON:0004121,6.06e-16,95;UBERON:0000924,6.06e-16,95;UBERON:0006601,6.06e-16,95;UBERON:0003056,6.87e-16,49;UBERON:0000956,3.39e-13,21;UBERON:0001869,3.39e-13,21;UBERON:0000203,3.39e-13,21;UBERON:0011216,1.45e-11,194;UBERON:0002619,8.17e-11,17;UBERON:0002021,9.44e-11,10;UBERON:0000411,9.44e-11,10;UBERON:0001950,9.44e-11,10;UBERON:0004111,1.33e-09,122;UBERON:0000160,1.47e-09,31;UBERON:0000025,2.25e-09,114;UBERON:0005409,3.93e-08,47;UBERON:0003076,9.31e-08,12;UBERON:0003057,9.31e-08,12;UBERON:0002420,1.20e-07,8;UBERON:0007245,1.20e-07,8;UBERON:0010009,1.20e-07,8;UBERON:0010011,1.20e-07,8;UBERON:0000454,1.20e-07,8;UBERON:0000483,8.59e-07,174 | |||
|phase1_expression=3.52327463630547,1.74487703819681,1.36499771816861,0.90739263392049,1.00179145989269,1.51091344720701,0.467225281191051,0,0.140788722151667,0,0,0,0.171200729931206,0,0,0,0,0,0,0,1.61582251287033,0,0,1.27993938234725,0.45881856213434,1.14846392823004,2.15380998079537,0.430942465371778,1.52018735565099,3.02436155711917,1.10865255327652,0,0,0,2.02196133825892,2.1610503896604,1.42918549383658,0,0,0,0.588231488031014,0,0.971020706062307,0,0,0,0.782391344348039,0,0.219686182734472,0,0,0,0,0,0,0,0,0,1.61853168687678,1.5869729378161,0,0.338844532069132,0,0,0,0,0,0,2.07379224616955,1.62007125998029,2.10324961351382,5.14171771926846,2.42955395046775,1.83736198822431,1.15014565221884,1.83843757322004,13.2139057199266,9.19348834213351,11.5204899942183,2.2420668914133,2.65314166446988,2.6045668527838,13.4007839520663,5.6276261003168,8.40390362772456,3.53554302568401,6.12198227436143,3.72798891650601,0.075726193333184,0,0,0,0,0,0,0,0.421333260395256,0,0,0,2.53518155598025,0,0,0,0,0,0,0.22836775943812,0,0.445326417194474,0.173485326766136,0,0,0,0.470354828542819,0.125666591329675,0.247194967734374,0.289198713839823,0,0,0,0,5.59175283654366,5.27005434620785,4.39838084308256,2.29911349687732,0,0,0,6.74057877321702,5.49000723382352,2.38743269014442,8.16974304903699,7.16003280524926,6.02585329222724,8.4365456795234,0.305518091550949,0,0,2.10441855886474,0,0,0,0.150704817835715,0.612328492361951,1.40925092313335,1.96773621575431,3.10444044886819,0,0,0.351902248327898,0,0,0,0,0,0,0,0,1.24275463521301,0.469052119962192,2.52086886045421,2.13070262026689,1.57411385397923,1.54267112887378,1.86027155800326,1.3413670069981,1.40118410840603,0.987359099480883,1.31333971263276,1.29710095273369,0.877199924551994,1.3173006917463,1.34206418760372,2.94405927989778,2.88132914661996,1.65209391491899,1.32225283331772,0.213288250535234,0.232236671860439,0.902072229254653,1.21010114774006,1.11189021922435,2.47293313946327,1.42358718463353,1.81168850196412,2.01068167040216,1.98956472041151,1.9496408711912,1.79763881730844,3.02593269824572,1.7922714592893,0,0.228497025219458,0,0,0,0.140271639780637,0.0632365371242573,0,0,0,0,0,0.589676985339609,0,0.202860121388503,0,0.25462585178142,0.287696137450811,0,0.274561413188081,0,1.86070473834252,0.624075346229121,0,0.179397413521912,0.482443521363367,0.369506380333209,0.189491411770485,0.162964976442026,0,0,0.167506257441816,0.238043640886014,0.390267295715598,0,0,0.159454768657487,0.491589944147214,0,0.144649058581512,0,0,0,0,9.9541365792431,12.0728037189969,0,0,0,0,0.215423397732799,0.238968797952552,0.668396022247182,0,0,0.876767573733936,0,4.4984984299053,0.425820255624806,0,0,0.329940245945071,1.32745138339963,0,0,0.377210159511796,0.295301892880773,0.922305443831782,0.516856586336442,1.09060118843252,0.356497378384721,0.316036757935816,2.10837217149998,2.06271086496374,2.38307724027652,0.18006109403131,0.129358683782755,0.214337035031592,0.532020700926821,0.178368817602071,0.493647061806363,0.304464949114599,0,0.21183207086382,0.220528398054962,0,0,0.0603129249281559,0,0.164140899745061,2.33184669303881,14.6485988588303,0.170870880797853,0.412773735926445,0,0,0,0,0,0,0.276399947608848,2.86401185404534,0,0.609958401380546,1.08005340821801,0.836353184057875,0.655087691238533,1.61837215661785,2.39695021603474,3.92633912976044,3.6292192521702,0,0,0,0,0,0.258319646955462,0,0.58678619322877,0.911430693907651,1.78260885523708,0.483168241652012,0,0.316011120628178,0.405450430580328,0.102710957164827,0.129920822977795,0,0,0.120195449519969,0.147689527174577,0,0,0,0,0,0,0,0,0,0,2.12508553435409,0.187682475451182,0,0.214368379079066,0,6.7770221114048,9.66682996665071,4.01026859407578,10.6548973053086,6.16574267793578,6.7985450765073,6.07520250208625,9.45674526770863,7.25027854374727,8.80192529978094,0,0,0,0.243106717068294,0.209613162627982,0,0.666740183404846,0.412070114477788,0.320919209591815,0.758091635291392,0,0.754505365544305,0.749132059759059,0.320125762024346,0.459483751644906,0.476293691283074,0.811190281613988,0.38581844092741,0.824171801606613,0.588795680537589,0.342869252385415,0.532427418478012,1.1921809497366,0.290692833264657,0.658765662907314,0.761531471025089,0.73171189149109,0.526139422875686,0.543216455383447,0.561142271657738,0.949080144993393,0.788035859004508,1.63692417267876,1.23949472948773,0.385813221962283,0.999242311751784,1.16965804222704,0.644613162144895,0.191288332068843,0.220591419119515,0.231867835620421 | |||
|short_description=p3@Atp8a2 | |||
}} |
Revision as of 14:01, 4 August 2015
Short description: | p3@Atp8a2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Atp8a2_5end |
Coexpression cluster: | MCL_coexpression_mm9:1 |
Association with transcript: | -28bp_to_ENSMUST00000140924_5end |
EntrezGene: | 50769 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 4.43e-15 | 23 |
neuroblast (sensu Vertebrata) | 4.43e-15 | 23 |
neuron | 2.33e-09 | 33 |
neuronal stem cell | 2.33e-09 | 33 |
neuroblast | 2.33e-09 | 33 |
electrically signaling cell | 2.33e-09 | 33 |
electrically responsive cell | 7.92e-07 | 39 |
electrically active cell | 7.92e-07 | 39 |