FFCP PHASE1:Mm9::chr2:25838650..25838674,-: Difference between revisions
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{{FFCP|EntrezGene=227634|HGNC=|MCL_coexpression_id=0|UniProt=|association_with_transcript=53bp_to_ENSMUST00000139937_5end|description=CAGE_peak_3_at_Camsap1_5end|id=chr2:25838650..25838674,-|ontology_enrichment_celltype=CL:0000117!1.32e-12!23;CL:0000337!1.32e-12!23;CL:0000540!2.04e-12!33;CL:0000047!2.04e-12!33;CL:0000031!2.04e-12!33;CL:0000404!2.04e-12!33;CL:0000393!4.90e-11!39;CL:0000211!4.90e-11!39;CL:0002319!2.58e-08!43;CL:0000221!6.38e-08!44;CL:0000133!6.38e-08!44;CL:0000055!4.29e-07!50|ontology_enrichment_celltype_v019_2=CL:0000117,2.49e-17,23;CL:0000337,2.49e-17,23;CL:0000540,3.17e-16,33;CL:0000047,3.17e-16,33;CL:0000031,3.17e-16,33;CL:0000404,3.17e-16,33;CL:0000393,3.37e-14,39;CL:0000211,3.37e-14,39;CL:0002319,7.58e-11,43;CL:0000221,2.30e-10,44;CL:0000133,2.30e-10,44|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!3.09e-22!73;UBERON:0005743!3.09e-22!73;UBERON:0000073!1.37e-21!75;UBERON:0001016!1.37e-21!75;UBERON:0000033!7.87e-21!63;UBERON:0001049!9.51e-21!52;UBERON:0005068!9.51e-21!52;UBERON:0006241!9.51e-21!52;UBERON:0007135!9.51e-21!52;UBERON:0002346!1.63e-20!71;UBERON:0003075!1.63e-20!71;UBERON:0007284!1.63e-20!71;UBERON:0004121!2.53e-20!102;UBERON:0000924!2.53e-20!102;UBERON:0006601!2.53e-20!102;UBERON:0003056!1.33e-19!49;UBERON:0000955!2.82e-19!50;UBERON:0006238!2.82e-19!50;UBERON:0002020!7.05e-19!34;UBERON:0002616!1.18e-18!49;UBERON:0003080!3.61e-17!40;UBERON:0002780!1.30e-16!39;UBERON:0001890!1.30e-16!39;UBERON:0006240!1.30e-16!39;UBERON:0002791!3.42e-16!29;UBERON:0003528!3.42e-16!29;UBERON:0001893!3.42e-16!29;UBERON:0000153!3.06e-12!94;UBERON:0007811!9.67e-12!86;UBERON:0000956!1.84e-11!21;UBERON:0001869!1.84e-11!21;UBERON:0000203!1.84e-11!21;UBERON:0002619!1.59e-09!17;UBERON:0002021!1.53e-07!10;UBERON:0000411!1.53e-07!10;UBERON:0001950!1.53e-07!10|ontology_enrichment_uberon_v019_2=UBERON:0001017,3.24e-30,73;UBERON:0002346,3.29e-29,64;UBERON:0003075,3.29e-29,64;UBERON:0007284,3.29e-29,64;UBERON:0000073,5.38e-29,54;UBERON:0001016,8.61e-29,75;UBERON:0001049,5.39e-28,52;UBERON:0005068,5.39e-28,52;UBERON:0006241,5.39e-28,52;UBERON:0007135,5.39e-28,52;UBERON:0002020,1.05e-25,34;UBERON:0004121,4.22e-25,95;UBERON:0000924,4.22e-25,95;UBERON:0006601,4.22e-25,95;UBERON:0000955,3.04e-24,47;UBERON:0006238,3.04e-24,47;UBERON:0010371,6.61e-24,73;UBERON:0002616,2.24e-23,46;UBERON:0003056,2.97e-23,49;UBERON:0003080,2.71e-22,40;UBERON:0003528,7.24e-22,29;UBERON:0002791,7.24e-22,29;UBERON:0001893,7.24e-22,29;UBERON:0002780,1.65e-21,39;UBERON:0001890,1.65e-21,39;UBERON:0006240,1.65e-21,39;UBERON:0010314,5.22e-16,92;UBERON:0000956,3.95e-15,21;UBERON:0001869,3.95e-15,21;UBERON:0000203,3.95e-15,21;UBERON:0002619,2.27e-12,17;UBERON:0002021,4.19e-10,10;UBERON:0000411,4.19e-10,10;UBERON:0001950,4.19e-10,10;UBERON:0002420,6.44e-08,8;UBERON:0007245,6.44e-08,8;UBERON:0010009,6.44e-08,8;UBERON:0010011,6.44e-08,8;UBERON:0000454,6.44e-08,8|phase1_expression=0.960893082628764,0.697950815278722,0,0,0.500895729946347,0.16787927191189,0.233612640595526,0.387369970324729,1.83025338797167,2.34064526321993,0.513653904676515,0.0797721589953364,0.171200729931206,0.174840804837995,0.333109761815663,0.202475267389826,0,0,0.137114433605739,0,15.3077922271926,0.0992909512008853,0.522399578277871,0.159992422793407,0,0.57423196411502,0,0.215471232685889,0,0.252030129759931,0,0,0.61506478758457,0,0.288851619751275,0,0.204169356262369,0,0,0,0,0,0,0.503587271902309,1.62203089951223,1.83546752161682,0,0.436050312760893,0.659058548203415,1.55543919259427,0.699932108126813,0,0.503347818173209,0,0.336093799142464,0.771778308107841,0.286533439938757,0,6.06949382578793,5.81890077199236,3.80298842103708,0.338844532069132,0,0,0,0.7104801149461,0.299600110518405,0,2.59224030771194,3.51015439662396,2.3135745748652,3.14216082844184,2.42955395046775,2.69479758272899,2.20444583341944,3.67687514644008,1.10115880999389,3.44755812830007,2.91852413186863,5.80299666012853,5.94669683415663,5.73004707612436,4.4669279840221,5.6276261003168,4.5839474333043,3.83017161115768,3.41692033917847,8.57437450796383,0.832988126665025,0.226714680320357,1.15945795480671,0,1.3599426674155,0,0,0.896053774194671,1.68533304158102,0,0,0.35333957451034,0.281686839553361,0,0,0,0.216491041011214,0.760079596425296,0.505524445014783,2.39786147410026,0,0.742210695324124,1.04091196059682,0,0.461230994512117,0.452167921657868,0.823120949949934,0.376999773989026,0.247194967734374,0.722996784599558,0,0.970601099684455,0.441683036920787,1.93950101254089,0,4.09893115816166,5.02672096352292,0.766371165625774,0,0,0,4.19413790333504,5.03250663100489,5.02617408451458,6.77914848749878,6.90431734791892,4.57133698031032,4.54275536589721,0.81471491080253,0.870848794270651,0.758168275301024,2.10441855886474,0.910843100738926,0.919608417733892,0.900310649026746,2.71268672104287,1.7009124787832,1.5373646434182,2.34254311399322,3.3631438196072,1.29340795759705,1.32374256117473,1.58356011747554,0.43839146485515,1.11218899690239,0.696504333044333,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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:227634 | |||
|HGNC= | |||
|MCL_coexpression_id=0 | |||
|TSSclassifier=NA | |||
|UniProt= | |||
|association_with_transcript=53bp_to_ENSMUST00000139937_5end | |||
|cluster_id=chr2:25838650..25838674,- | |||
|description=CAGE_peak_3_at_Camsap1_5end | |||
|id=chr2:25838650..25838674,- | |||
|ontology_enrichment_celltype=CL:0000117!1.32e-12!23;CL:0000337!1.32e-12!23;CL:0000540!2.04e-12!33;CL:0000047!2.04e-12!33;CL:0000031!2.04e-12!33;CL:0000404!2.04e-12!33;CL:0000393!4.90e-11!39;CL:0000211!4.90e-11!39;CL:0002319!2.58e-08!43;CL:0000221!6.38e-08!44;CL:0000133!6.38e-08!44;CL:0000055!4.29e-07!50 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,2.49e-17,23;CL:0000337,2.49e-17,23;CL:0000540,3.17e-16,33;CL:0000047,3.17e-16,33;CL:0000031,3.17e-16,33;CL:0000404,3.17e-16,33;CL:0000393,3.37e-14,39;CL:0000211,3.37e-14,39;CL:0002319,7.58e-11,43;CL:0000221,2.30e-10,44;CL:0000133,2.30e-10,44 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!3.09e-22!73;UBERON:0005743!3.09e-22!73;UBERON:0000073!1.37e-21!75;UBERON:0001016!1.37e-21!75;UBERON:0000033!7.87e-21!63;UBERON:0001049!9.51e-21!52;UBERON:0005068!9.51e-21!52;UBERON:0006241!9.51e-21!52;UBERON:0007135!9.51e-21!52;UBERON:0002346!1.63e-20!71;UBERON:0003075!1.63e-20!71;UBERON:0007284!1.63e-20!71;UBERON:0004121!2.53e-20!102;UBERON:0000924!2.53e-20!102;UBERON:0006601!2.53e-20!102;UBERON:0003056!1.33e-19!49;UBERON:0000955!2.82e-19!50;UBERON:0006238!2.82e-19!50;UBERON:0002020!7.05e-19!34;UBERON:0002616!1.18e-18!49;UBERON:0003080!3.61e-17!40;UBERON:0002780!1.30e-16!39;UBERON:0001890!1.30e-16!39;UBERON:0006240!1.30e-16!39;UBERON:0002791!3.42e-16!29;UBERON:0003528!3.42e-16!29;UBERON:0001893!3.42e-16!29;UBERON:0000153!3.06e-12!94;UBERON:0007811!9.67e-12!86;UBERON:0000956!1.84e-11!21;UBERON:0001869!1.84e-11!21;UBERON:0000203!1.84e-11!21;UBERON:0002619!1.59e-09!17;UBERON:0002021!1.53e-07!10;UBERON:0000411!1.53e-07!10;UBERON:0001950!1.53e-07!10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,3.24e-30,73;UBERON:0002346,3.29e-29,64;UBERON:0003075,3.29e-29,64;UBERON:0007284,3.29e-29,64;UBERON:0000073,5.38e-29,54;UBERON:0001016,8.61e-29,75;UBERON:0001049,5.39e-28,52;UBERON:0005068,5.39e-28,52;UBERON:0006241,5.39e-28,52;UBERON:0007135,5.39e-28,52;UBERON:0002020,1.05e-25,34;UBERON:0004121,4.22e-25,95;UBERON:0000924,4.22e-25,95;UBERON:0006601,4.22e-25,95;UBERON:0000955,3.04e-24,47;UBERON:0006238,3.04e-24,47;UBERON:0010371,6.61e-24,73;UBERON:0002616,2.24e-23,46;UBERON:0003056,2.97e-23,49;UBERON:0003080,2.71e-22,40;UBERON:0003528,7.24e-22,29;UBERON:0002791,7.24e-22,29;UBERON:0001893,7.24e-22,29;UBERON:0002780,1.65e-21,39;UBERON:0001890,1.65e-21,39;UBERON:0006240,1.65e-21,39;UBERON:0010314,5.22e-16,92;UBERON:0000956,3.95e-15,21;UBERON:0001869,3.95e-15,21;UBERON:0000203,3.95e-15,21;UBERON:0002619,2.27e-12,17;UBERON:0002021,4.19e-10,10;UBERON:0000411,4.19e-10,10;UBERON:0001950,4.19e-10,10;UBERON:0002420,6.44e-08,8;UBERON:0007245,6.44e-08,8;UBERON:0010009,6.44e-08,8;UBERON:0010011,6.44e-08,8;UBERON:0000454,6.44e-08,8 | |||
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| |||
|short_description=p3@Camsap1 | |||
}} |
Revision as of 21:15, 4 August 2015
Short description: | p3@Camsap1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Camsap1_5end |
Coexpression cluster: | MCL_coexpression_mm9:0 |
Association with transcript: | 53bp_to_ENSMUST00000139937_5end |
EntrezGene: | 227634 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 2.49e-17 | 23 |
neuroblast (sensu Vertebrata) | 2.49e-17 | 23 |
neuron | 3.17e-16 | 33 |
neuronal stem cell | 3.17e-16 | 33 |
neuroblast | 3.17e-16 | 33 |
electrically signaling cell | 3.17e-16 | 33 |
electrically responsive cell | 3.37e-14 | 39 |
electrically active cell | 3.37e-14 | 39 |
neural cell | 7.58e-11 | 43 |
ectodermal cell | 2.30e-10 | 44 |
neurectodermal cell | 2.30e-10 | 44 |