FFCP PHASE1:Mm9::chr9:29220045..29220088,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|EntrezGene=235106|HGNC=|MCL_coexpression_id=2|UniProt=Q99PJ0|association_with_transcript=-256bp_to_ENSMUST00000115237_5end|description=CAGE_peak_3_at_Ntm_5end|id=chr9:29220045..29220088,-|ontology_enrichment_celltype=CL:0000117!1.85e-09!23;CL:0000337!1.85e-09!23;CL:0000540!1.77e-07!33;CL:0000047!1.77e-07!33;CL:0000031!1.77e-07!33;CL:0000404!1.77e-07!33|ontology_enrichment_celltype_v019_2=CL:0000117,5.31e-14,23;CL:0000337,5.31e-14,23;CL:0000540,2.79e-08,33;CL:0000047,2.79e-08,33;CL:0000031,2.79e-08,33;CL:0000404,2.79e-08,33;CL:0002319,9.14e-07,43|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000033!9.66e-21!63;UBERON:0000073!4.80e-20!75;UBERON:0001016!4.80e-20!75;UBERON:0002346!1.31e-19!71;UBERON:0003075!1.31e-19!71;UBERON:0007284!1.31e-19!71;UBERON:0001049!1.71e-19!52;UBERON:0005068!1.71e-19!52;UBERON:0006241!1.71e-19!52;UBERON:0007135!1.71e-19!52;UBERON:0001017!3.85e-19!73;UBERON:0005743!3.85e-19!73;UBERON:0000955!3.30e-18!50;UBERON:0006238!3.30e-18!50;UBERON:0004121!5.50e-18!102;UBERON:0000924!5.50e-18!102;UBERON:0006601!5.50e-18!102;UBERON:0002616!1.66e-17!49;UBERON:0003056!7.82e-17!49;UBERON:0002020!7.41e-14!34;UBERON:0003080!1.21e-13!40;UBERON:0002780!4.53e-13!39;UBERON:0001890!4.53e-13!39;UBERON:0006240!4.53e-13!39;UBERON:0000153!5.31e-11!94;UBERON:0002791!9.39e-11!29;UBERON:0003528!9.39e-11!29;UBERON:0001893!9.39e-11!29;UBERON:0007811!1.16e-10!86;UBERON:0002021!3.87e-09!10;UBERON:0000411!3.87e-09!10;UBERON:0001950!3.87e-09!10;UBERON:0002619!9.68e-07!17;UBERON:0003076!9.80e-07!12;UBERON:0003057!9.80e-07!12|ontology_enrichment_uberon_v019_2=UBERON:0000073,6.72e-32,54;UBERON:0002346,1.05e-30,64;UBERON:0003075,1.05e-30,64;UBERON:0007284,1.05e-30,64;UBERON:0001016,9.26e-30,75;UBERON:0001049,1.74e-29,52;UBERON:0005068,1.74e-29,52;UBERON:0006241,1.74e-29,52;UBERON:0007135,1.74e-29,52;UBERON:0001017,3.71e-28,73;UBERON:0004121,5.20e-28,95;UBERON:0000924,5.20e-28,95;UBERON:0006601,5.20e-28,95;UBERON:0010371,2.59e-25,73;UBERON:0000955,7.84e-24,47;UBERON:0006238,7.84e-24,47;UBERON:0010314,5.91e-23,92;UBERON:0003056,9.09e-23,49;UBERON:0002616,1.25e-22,46;UBERON:0002020,7.12e-22,34;UBERON:0003080,1.22e-19,40;UBERON:0002780,1.25e-18,39;UBERON:0001890,1.25e-18,39;UBERON:0006240,1.25e-18,39;UBERON:0003528,3.08e-16,29;UBERON:0002791,3.08e-16,29;UBERON:0001893,3.08e-16,29;UBERON:0002021,8.00e-16,10;UBERON:0000411,8.00e-16,10;UBERON:0001950,8.00e-16,10;UBERON:0000025,1.18e-11,114;UBERON:0003076,1.76e-10,12;UBERON:0003057,1.76e-10,12;UBERON:0004111,4.08e-10,122;UBERON:0002619,9.49e-10,17;UBERON:0002420,1.20e-09,8;UBERON:0007245,1.20e-09,8;UBERON:0010009,1.20e-09,8;UBERON:0010011,1.20e-09,8;UBERON:0000454,1.20e-09,8;UBERON:0000956,8.09e-09,21;UBERON:0001869,8.09e-09,21;UBERON:0000203,8.09e-09,21;UBERON:0002240,1.94e-08,6;UBERON:0005174,1.94e-08,6;UBERON:0001137,1.94e-08,6;UBERON:0001948,2.08e-07,5;UBERON:0002315,2.08e-07,5|phase1_expression=0.80074423552397,0,0,0,0,0,0,0,0,0.234064526321993,0,0,0,0,0,0,0,0,0,0,2.12608225377674,0,0,0,0,0.57423196411502,0.430761996159075,0.215471232685889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.782391344348039,0,0,0,0,0,0,0,0,0,0,0,6.67644320836673,2.64495489636016,6.33831403506179,0,0,0,0,0,0,0,0.414758449233911,0,0.210324961351382,3.99911378165325,5.52171352379034,0.367472397644862,0.575072826109418,0,8.8092704799511,3.44755812830007,4.91540906419979,5.80299666012853,5.03182039813253,3.64639359389732,1.95428099300967,4.50210088025344,4.88954392885792,6.48182888042069,5.41012387036591,7.82877672466262,1.06016670666458,1.28471652181535,0,0,0,0,0,0,0.421333260395256,0,0,0,0.985903938436763,0,0,0,0,0,0,0.11418387971906,0,0,0.173485326766136,0,0,0.150722640552623,0.117588707135705,0.125666591329675,0,0.144599356919912,0.884610551949874,0.970601099684455,0,0,0,24.3008061519584,28.2753054198164,0,0,0,0,4.49371918214468,4.57500602818627,1.00523481690292,19.2944995413427,20.7129520437568,4.98691306942944,8.92326946872667,0.203678727700633,0,0,0.420883711772948,0.260240885925407,1.14951052216736,0.720248519221397,2.10986744970001,3.40182495756639,1.92170580427275,1.40552586839593,1.29351685369508,0.215567992932842,0.756424320671277,0.175951124163949,0.43839146485515,0.278047249225598,0.348252166522167,0.411564272815887,0.398068533636986,0,0,0,1.44988040774851,1.17263029990548,1.2604344302271,1.89395788468168,1.37734962223183,0.925602677324269,0.232533944750408,0.268273401399619,0.467061369468678,0.658239399653922,0.492502392237286,0.162137619091711,0,0.219550115291051,0,4.6263788684108,0.92614151141356,0,0.264450566663544,0.853153002140936,0.464473343720877,0.257734922644187,0,0,0.190225626112559,0,0.164698954724011,0,0,0,0,0,0,0.379335801906163,1.14248512609729,0,0.203651327845314,0.775809948670503,0.911765658574141,0.505892296994058,0,0,0.123397163921801,0,0,0,0,0.202860121388503,0,0,0,0,0,0,0,0,0,0,0,0,0.757965647081939,0.325929952884052,0.169745085775188,0.704070744865506,0.167506257441816,0,0,0.315270288212382,0,0.159454768657487,0,0,0,0,0,0,0,3.53211297973142,3.5163505977661,0,0,0.631016438832513,0,0.430846795465598,0,0.668396022247182,0.283076530788832,0,0,0.395287777946524,10.6036034419196,0,0.35613120733451,0.651547837414304,2.3095817216155,0,0.242780636154981,0,0.377210159511796,0.295301892880773,0.614870295887855,0,0,0.356497378384721,0,0,0,1.36175842301515,0.900305470156551,1.16422815404479,1.50035924522115,0.354680467284547,0.178368817602071,1.15184314421485,0,0,0,0,0.16488625294148,0.645857706783622,0.120625849856312,0,0,0,3.8939313422207,0.170870880797853,0.82554747185289,0.185194527369712,0,0,0,0,0,0,0,0.316335993581135,0.406638934253697,0.216010681643603,0,0.218362563746178,0.404593039154462,0.165306911450672,0,0,0,0,0,0,0,0,0,0.117357238645754,0,0,0,0,0,0.202725215290164,0.102710957164827,0.389762468933385,0,0,0,0,0.100966449948148,0,0,0,0,0,0,0,0,0,0,0,0.915758121336325,0,0,42.9211400388971,41.8895965221531,38.956894913879,43.3070019506093,47.955776383945,43.8128460486026,31.0510350106631,33.3237690385923,29.0011141749891,35.7254615108756,0.103787347584177,1.59609949360412,1.19513524027894,0.729320151204882,0.628839487883947,0.735374033800057,1.77797382241292,0.412070114477788,0.962757628775446,1.01078884705519,0.50695859978048,0.943131706930381,0.749132059759059,0.832326981263301,0.861532034334199,1.90517476513229,1.0429589335037,0.578727661391115,0.412085900803307,0.588795680537589,0.685738504770831,1.24233064311536,0.476872379894642,0.726732083161643,0.846984423737976,0.676916863133412,0.182927972872773,0.526139422875686,0.950628796921032,1.12228454331548,0.949080144993393,0.886540341380071,0.409231043169689,0.929621047115796,0,1.49886346762768,1.40358965067245,0.859484216193193,1.3390183244819,0.441182838239031,0|short_description=p3@Ntm}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:235106 | |||
|HGNC= | |||
|MCL_coexpression_id=2 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:Q99PJ0 | |||
|association_with_transcript=-256bp_to_ENSMUST00000115237_5end | |||
|cluster_id=chr9:29220045..29220088,- | |||
|description=CAGE_peak_3_at_Ntm_5end | |||
|id=chr9:29220045..29220088,- | |||
|ontology_enrichment_celltype=CL:0000117!1.85e-09!23;CL:0000337!1.85e-09!23;CL:0000540!1.77e-07!33;CL:0000047!1.77e-07!33;CL:0000031!1.77e-07!33;CL:0000404!1.77e-07!33 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,5.31e-14,23;CL:0000337,5.31e-14,23;CL:0000540,2.79e-08,33;CL:0000047,2.79e-08,33;CL:0000031,2.79e-08,33;CL:0000404,2.79e-08,33;CL:0002319,9.14e-07,43 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000033!9.66e-21!63;UBERON:0000073!4.80e-20!75;UBERON:0001016!4.80e-20!75;UBERON:0002346!1.31e-19!71;UBERON:0003075!1.31e-19!71;UBERON:0007284!1.31e-19!71;UBERON:0001049!1.71e-19!52;UBERON:0005068!1.71e-19!52;UBERON:0006241!1.71e-19!52;UBERON:0007135!1.71e-19!52;UBERON:0001017!3.85e-19!73;UBERON:0005743!3.85e-19!73;UBERON:0000955!3.30e-18!50;UBERON:0006238!3.30e-18!50;UBERON:0004121!5.50e-18!102;UBERON:0000924!5.50e-18!102;UBERON:0006601!5.50e-18!102;UBERON:0002616!1.66e-17!49;UBERON:0003056!7.82e-17!49;UBERON:0002020!7.41e-14!34;UBERON:0003080!1.21e-13!40;UBERON:0002780!4.53e-13!39;UBERON:0001890!4.53e-13!39;UBERON:0006240!4.53e-13!39;UBERON:0000153!5.31e-11!94;UBERON:0002791!9.39e-11!29;UBERON:0003528!9.39e-11!29;UBERON:0001893!9.39e-11!29;UBERON:0007811!1.16e-10!86;UBERON:0002021!3.87e-09!10;UBERON:0000411!3.87e-09!10;UBERON:0001950!3.87e-09!10;UBERON:0002619!9.68e-07!17;UBERON:0003076!9.80e-07!12;UBERON:0003057!9.80e-07!12 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,6.72e-32,54;UBERON:0002346,1.05e-30,64;UBERON:0003075,1.05e-30,64;UBERON:0007284,1.05e-30,64;UBERON:0001016,9.26e-30,75;UBERON:0001049,1.74e-29,52;UBERON:0005068,1.74e-29,52;UBERON:0006241,1.74e-29,52;UBERON:0007135,1.74e-29,52;UBERON:0001017,3.71e-28,73;UBERON:0004121,5.20e-28,95;UBERON:0000924,5.20e-28,95;UBERON:0006601,5.20e-28,95;UBERON:0010371,2.59e-25,73;UBERON:0000955,7.84e-24,47;UBERON:0006238,7.84e-24,47;UBERON:0010314,5.91e-23,92;UBERON:0003056,9.09e-23,49;UBERON:0002616,1.25e-22,46;UBERON:0002020,7.12e-22,34;UBERON:0003080,1.22e-19,40;UBERON:0002780,1.25e-18,39;UBERON:0001890,1.25e-18,39;UBERON:0006240,1.25e-18,39;UBERON:0003528,3.08e-16,29;UBERON:0002791,3.08e-16,29;UBERON:0001893,3.08e-16,29;UBERON:0002021,8.00e-16,10;UBERON:0000411,8.00e-16,10;UBERON:0001950,8.00e-16,10;UBERON:0000025,1.18e-11,114;UBERON:0003076,1.76e-10,12;UBERON:0003057,1.76e-10,12;UBERON:0004111,4.08e-10,122;UBERON:0002619,9.49e-10,17;UBERON:0002420,1.20e-09,8;UBERON:0007245,1.20e-09,8;UBERON:0010009,1.20e-09,8;UBERON:0010011,1.20e-09,8;UBERON:0000454,1.20e-09,8;UBERON:0000956,8.09e-09,21;UBERON:0001869,8.09e-09,21;UBERON:0000203,8.09e-09,21;UBERON:0002240,1.94e-08,6;UBERON:0005174,1.94e-08,6;UBERON:0001137,1.94e-08,6;UBERON:0001948,2.08e-07,5;UBERON:0002315,2.08e-07,5 | |||
|phase1_expression=0.80074423552397,0,0,0,0,0,0,0,0,0.234064526321993,0,0,0,0,0,0,0,0,0,0,2.12608225377674,0,0,0,0,0.57423196411502,0.430761996159075,0.215471232685889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.782391344348039,0,0,0,0,0,0,0,0,0,0,0,6.67644320836673,2.64495489636016,6.33831403506179,0,0,0,0,0,0,0,0.414758449233911,0,0.210324961351382,3.99911378165325,5.52171352379034,0.367472397644862,0.575072826109418,0,8.8092704799511,3.44755812830007,4.91540906419979,5.80299666012853,5.03182039813253,3.64639359389732,1.95428099300967,4.50210088025344,4.88954392885792,6.48182888042069,5.41012387036591,7.82877672466262,1.06016670666458,1.28471652181535,0,0,0,0,0,0,0.421333260395256,0,0,0,0.985903938436763,0,0,0,0,0,0,0.11418387971906,0,0,0.173485326766136,0,0,0.150722640552623,0.117588707135705,0.125666591329675,0,0.144599356919912,0.884610551949874,0.970601099684455,0,0,0,24.3008061519584,28.2753054198164,0,0,0,0,4.49371918214468,4.57500602818627,1.00523481690292,19.2944995413427,20.7129520437568,4.98691306942944,8.92326946872667,0.203678727700633,0,0,0.420883711772948,0.260240885925407,1.14951052216736,0.720248519221397,2.10986744970001,3.40182495756639,1.92170580427275,1.40552586839593,1.29351685369508,0.215567992932842,0.756424320671277,0.175951124163949,0.43839146485515,0.278047249225598,0.348252166522167,0.411564272815887,0.398068533636986,0,0,0,1.44988040774851,1.17263029990548,1.2604344302271,1.89395788468168,1.37734962223183,0.925602677324269,0.232533944750408,0.268273401399619,0.467061369468678,0.658239399653922,0.492502392237286,0.162137619091711,0,0.219550115291051,0,4.6263788684108,0.92614151141356,0,0.264450566663544,0.853153002140936,0.464473343720877,0.257734922644187,0,0,0.190225626112559,0,0.164698954724011,0,0,0,0,0,0,0.379335801906163,1.14248512609729,0,0.203651327845314,0.775809948670503,0.911765658574141,0.505892296994058,0,0,0.123397163921801,0,0,0,0,0.202860121388503,0,0,0,0,0,0,0,0,0,0,0,0,0.757965647081939,0.325929952884052,0.169745085775188,0.704070744865506,0.167506257441816,0,0,0.315270288212382,0,0.159454768657487,0,0,0,0,0,0,0,3.53211297973142,3.5163505977661,0,0,0.631016438832513,0,0.430846795465598,0,0.668396022247182,0.283076530788832,0,0,0.395287777946524,10.6036034419196,0,0.35613120733451,0.651547837414304,2.3095817216155,0,0.242780636154981,0,0.377210159511796,0.295301892880773,0.614870295887855,0,0,0.356497378384721,0,0,0,1.36175842301515,0.900305470156551,1.16422815404479,1.50035924522115,0.354680467284547,0.178368817602071,1.15184314421485,0,0,0,0,0.16488625294148,0.645857706783622,0.120625849856312,0,0,0,3.8939313422207,0.170870880797853,0.82554747185289,0.185194527369712,0,0,0,0,0,0,0,0.316335993581135,0.406638934253697,0.216010681643603,0,0.218362563746178,0.404593039154462,0.165306911450672,0,0,0,0,0,0,0,0,0,0.117357238645754,0,0,0,0,0,0.202725215290164,0.102710957164827,0.389762468933385,0,0,0,0,0.100966449948148,0,0,0,0,0,0,0,0,0,0,0,0.915758121336325,0,0,42.9211400388971,41.8895965221531,38.956894913879,43.3070019506093,47.955776383945,43.8128460486026,31.0510350106631,33.3237690385923,29.0011141749891,35.7254615108756,0.103787347584177,1.59609949360412,1.19513524027894,0.729320151204882,0.628839487883947,0.735374033800057,1.77797382241292,0.412070114477788,0.962757628775446,1.01078884705519,0.50695859978048,0.943131706930381,0.749132059759059,0.832326981263301,0.861532034334199,1.90517476513229,1.0429589335037,0.578727661391115,0.412085900803307,0.588795680537589,0.685738504770831,1.24233064311536,0.476872379894642,0.726732083161643,0.846984423737976,0.676916863133412,0.182927972872773,0.526139422875686,0.950628796921032,1.12228454331548,0.949080144993393,0.886540341380071,0.409231043169689,0.929621047115796,0,1.49886346762768,1.40358965067245,0.859484216193193,1.3390183244819,0.441182838239031,0 | |||
|short_description=p3@Ntm | |||
}} |
Revision as of 23:30, 4 August 2015
Short description: | p3@Ntm |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Ntm_5end |
Coexpression cluster: | MCL_coexpression_mm9:2 |
Association with transcript: | -256bp_to_ENSMUST00000115237_5end |
EntrezGene: | 235106 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 5.31e-14 | 23 |
neuroblast (sensu Vertebrata) | 5.31e-14 | 23 |
neuron | 2.79e-08 | 33 |
neuronal stem cell | 2.79e-08 | 33 |
neuroblast | 2.79e-08 | 33 |
electrically signaling cell | 2.79e-08 | 33 |
neural cell | 9.14e-07 | 43 |