FFCP PHASE1:Mm9::chr9:29770620..29770631,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|EntrezGene=235106|HGNC=|MCL_coexpression_id=2|UniProt=|association_with_transcript=72bp_to_ENSMUST00000146651_5end|description=CAGE_peak_7_at_Ntm_5end|id=chr9:29770620..29770631,-|ontology_enrichment_celltype=CL:0000117!3.52e-17!23;CL:0000337!3.52e-17!23;CL:0000540!1.18e-10!33;CL:0000047!1.18e-10!33;CL:0000031!1.18e-10!33;CL:0000404!1.18e-10!33;CL:0000393!6.58e-08!39;CL:0000211!6.58e-08!39|ontology_enrichment_celltype_v019_2=CL:0000117,4.84e-19,23;CL:0000337,4.84e-19,23;CL:0000540,3.66e-12,33;CL:0000047,3.66e-12,33;CL:0000031,3.66e-12,33;CL:0000404,3.66e-12,33;CL:0000393,9.58e-10,39;CL:0000211,9.58e-10,39;CL:0002319,1.63e-08,43;CL:0000221,3.04e-08,44;CL:0000133,3.04e-08,44;CL:0002610,2.73e-07,3;CL:0002614,6.28e-07,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001049!2.72e-28!52;UBERON:0005068!2.72e-28!52;UBERON:0006241!2.72e-28!52;UBERON:0007135!2.72e-28!52;UBERON:0002020!4.52e-27!34;UBERON:0000955!9.32e-27!50;UBERON:0006238!9.32e-27!50;UBERON:0002616!7.20e-26!49;UBERON:0001017!1.93e-24!73;UBERON:0005743!1.93e-24!73;UBERON:0000033!1.18e-23!63;UBERON:0000073!2.59e-23!75;UBERON:0001016!2.59e-23!75;UBERON:0002791!8.70e-23!29;UBERON:0003528!8.70e-23!29;UBERON:0001893!8.70e-23!29;UBERON:0002346!1.41e-21!71;UBERON:0003075!1.41e-21!71;UBERON:0007284!1.41e-21!71;UBERON:0003080!1.14e-20!40;UBERON:0003056!2.89e-20!49;UBERON:0002780!9.27e-20!39;UBERON:0001890!9.27e-20!39;UBERON:0006240!9.27e-20!39;UBERON:0004121!7.52e-18!102;UBERON:0000924!7.52e-18!102;UBERON:0006601!7.52e-18!102;UBERON:0000956!6.02e-16!21;UBERON:0001869!6.02e-16!21;UBERON:0000203!6.02e-16!21;UBERON:0007811!1.57e-14!86;UBERON:0002619!8.26e-13!17;UBERON:0002021!2.52e-12!10;UBERON:0000411!2.52e-12!10;UBERON:0001950!2.52e-12!10;UBERON:0000153!5.32e-12!94;UBERON:0000025!3.90e-08!114;UBERON:0003076!4.69e-08!12;UBERON:0003057!4.69e-08!12;UBERON:0002420!5.52e-08!8;UBERON:0007245!5.52e-08!8;UBERON:0010009!5.52e-08!8;UBERON:0010011!5.52e-08!8;UBERON:0000454!5.52e-08!8;UBERON:0002298!6.16e-07!6|ontology_enrichment_uberon_v019_2=UBERON:0000073,3.74e-44,54;UBERON:0001049,1.74e-40,52;UBERON:0005068,1.74e-40,52;UBERON:0006241,1.74e-40,52;UBERON:0007135,1.74e-40,52;UBERON:0001017,4.03e-39,73;UBERON:0001016,7.33e-38,75;UBERON:0002020,1.32e-35,34;UBERON:0000955,1.86e-34,47;UBERON:0006238,1.86e-34,47;UBERON:0002616,7.82e-33,46;UBERON:0002346,1.82e-31,64;UBERON:0003075,1.82e-31,64;UBERON:0007284,1.82e-31,64;UBERON:0003528,5.15e-30,29;UBERON:0002791,5.15e-30,29;UBERON:0001893,5.15e-30,29;UBERON:0004121,3.58e-28,95;UBERON:0000924,3.58e-28,95;UBERON:0006601,3.58e-28,95;UBERON:0003080,2.56e-27,40;UBERON:0010371,1.20e-26,73;UBERON:0002780,1.17e-25,39;UBERON:0001890,1.17e-25,39;UBERON:0006240,1.17e-25,39;UBERON:0002021,9.00e-24,10;UBERON:0000411,9.00e-24,10;UBERON:0001950,9.00e-24,10;UBERON:0003056,3.43e-21,49;UBERON:0010314,1.46e-19,92;UBERON:0000956,1.95e-19,21;UBERON:0001869,1.95e-19,21;UBERON:0000203,1.95e-19,21;UBERON:0002619,2.49e-18,17;UBERON:0000025,2.08e-15,114;UBERON:0004111,6.91e-14,122;UBERON:0003076,2.88e-13,12;UBERON:0003057,2.88e-13,12;UBERON:0002420,9.41e-12,8;UBERON:0007245,9.41e-12,8;UBERON:0010009,9.41e-12,8;UBERON:0010011,9.41e-12,8;UBERON:0000454,9.41e-12,8;UBERON:0011216,2.53e-10,194;UBERON:0002950,9.01e-09,4;UBERON:0001891,9.01e-09,4;UBERON:0009616,9.01e-09,4;UBERON:0010286,9.01e-09,4;UBERON:0002240,1.70e-08,6;UBERON:0005174,1.70e-08,6;UBERON:0001137,1.70e-08,6;UBERON:0000483,2.04e-07,174;UBERON:0004684,2.73e-07,3;UBERON:0002275,2.73e-07,3;UBERON:0000119,3.04e-07,176;UBERON:0002038,6.28e-07,3;UBERON:0009663,6.28e-07,3;UBERON:0009661,6.28e-07,3;UBERON:0000125,6.28e-07,3;UBERON:0002308,6.28e-07,3|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.935476191661768,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.41621522601718,2.11596391708813,0,0,0,0,0,0,0,0,0.725827286159344,1.62007125998029,0.630974884054146,2.28520787523043,2.42955395046775,0.367472397644862,0.191690942036473,0.919218786610021,3.30347642998166,6.12899222808901,5.83704826373725,1.58263545276233,3.56801810049398,2.6045668527838,3.62937898701795,4.50210088025344,2.90316670775939,2.65165726926301,3.98640706237488,0.745597783301202,0,0,0,0,0,0,0,0.448026887097336,0,0,0,0,0,0,0,0,0,0,0,0.5709193985953,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.14839673724249,10.2628886338593,0,0,0,0,4.49371918214468,3.20250421973039,0.628271760564322,10.4294592115366,11.2514801225345,4.77912502486988,4.54275536589721,0,0,0,0,0,0.229902104433473,0,0,0.272145996605311,0.2562274405697,0.281105173679186,0.776110112217047,0,0,0,0,0,0,0,0,0,0,0,0,0.234526059981096,0.180062061461015,0,0,0.154267112887378,0,0,0,0,0,0,0,0,0,2.94405927989778,3.08713837137853,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.43768206527355,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.77982123956051,5.97779601620236,0,0,0,0,0,0,0,0,0,0.292255857911312,0,2.89189184779626,0,0,0,0.164970122972535,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178368817602071,0,0.304464949114599,0,0,0,0.16488625294148,0,0.0603129249281559,0,0,0,7.04616147639937,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.149516546043979,0.330916980914195,0,0,0,0,0,0.104859344425711,0,0,0,0.202725215290164,0,0,0,0,0.120195449519969,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,11.2950368523413,14.2700823317225,18.3326564300607,25.4342709868658,6.85082519770642,15.107877947794,10.1253375034771,14.8605997063993,13.5942722695261,11.9084871702919,0,0,0.512200817262403,0.243106717068294,0.209613162627982,0,0.44449345560323,0.412070114477788,0.320919209591815,0,0.25347929989024,0.377252682772152,0.561849044819294,0.256100609619477,0.34461281373368,0.476293691283074,0.347652977834566,0.38581844092741,0.412085900803307,0.588795680537589,0.342869252385415,0.532427418478012,0.238436189947321,0.581385666529314,0.658765662907314,0.507687647350059,0.182927972872773,1.05227884575137,0.271608227691724,0.561142271657738,0.355905054372522,0.0985044823755635,0.818462086339379,0.619747364743864,0.771626443924566,0,0.233931608445408,0.644613162144895,0.191288332068843,0,0|short_description=p7@Ntm}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:235106 | |||
|HGNC= | |||
|MCL_coexpression_id=2 | |||
|TSSclassifier=NA | |||
|UniProt= | |||
|association_with_transcript=72bp_to_ENSMUST00000146651_5end | |||
|cluster_id=chr9:29770620..29770631,- | |||
|description=CAGE_peak_7_at_Ntm_5end | |||
|id=chr9:29770620..29770631,- | |||
|ontology_enrichment_celltype=CL:0000117!3.52e-17!23;CL:0000337!3.52e-17!23;CL:0000540!1.18e-10!33;CL:0000047!1.18e-10!33;CL:0000031!1.18e-10!33;CL:0000404!1.18e-10!33;CL:0000393!6.58e-08!39;CL:0000211!6.58e-08!39 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,4.84e-19,23;CL:0000337,4.84e-19,23;CL:0000540,3.66e-12,33;CL:0000047,3.66e-12,33;CL:0000031,3.66e-12,33;CL:0000404,3.66e-12,33;CL:0000393,9.58e-10,39;CL:0000211,9.58e-10,39;CL:0002319,1.63e-08,43;CL:0000221,3.04e-08,44;CL:0000133,3.04e-08,44;CL:0002610,2.73e-07,3;CL:0002614,6.28e-07,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!2.72e-28!52;UBERON:0005068!2.72e-28!52;UBERON:0006241!2.72e-28!52;UBERON:0007135!2.72e-28!52;UBERON:0002020!4.52e-27!34;UBERON:0000955!9.32e-27!50;UBERON:0006238!9.32e-27!50;UBERON:0002616!7.20e-26!49;UBERON:0001017!1.93e-24!73;UBERON:0005743!1.93e-24!73;UBERON:0000033!1.18e-23!63;UBERON:0000073!2.59e-23!75;UBERON:0001016!2.59e-23!75;UBERON:0002791!8.70e-23!29;UBERON:0003528!8.70e-23!29;UBERON:0001893!8.70e-23!29;UBERON:0002346!1.41e-21!71;UBERON:0003075!1.41e-21!71;UBERON:0007284!1.41e-21!71;UBERON:0003080!1.14e-20!40;UBERON:0003056!2.89e-20!49;UBERON:0002780!9.27e-20!39;UBERON:0001890!9.27e-20!39;UBERON:0006240!9.27e-20!39;UBERON:0004121!7.52e-18!102;UBERON:0000924!7.52e-18!102;UBERON:0006601!7.52e-18!102;UBERON:0000956!6.02e-16!21;UBERON:0001869!6.02e-16!21;UBERON:0000203!6.02e-16!21;UBERON:0007811!1.57e-14!86;UBERON:0002619!8.26e-13!17;UBERON:0002021!2.52e-12!10;UBERON:0000411!2.52e-12!10;UBERON:0001950!2.52e-12!10;UBERON:0000153!5.32e-12!94;UBERON:0000025!3.90e-08!114;UBERON:0003076!4.69e-08!12;UBERON:0003057!4.69e-08!12;UBERON:0002420!5.52e-08!8;UBERON:0007245!5.52e-08!8;UBERON:0010009!5.52e-08!8;UBERON:0010011!5.52e-08!8;UBERON:0000454!5.52e-08!8;UBERON:0002298!6.16e-07!6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,3.74e-44,54;UBERON:0001049,1.74e-40,52;UBERON:0005068,1.74e-40,52;UBERON:0006241,1.74e-40,52;UBERON:0007135,1.74e-40,52;UBERON:0001017,4.03e-39,73;UBERON:0001016,7.33e-38,75;UBERON:0002020,1.32e-35,34;UBERON:0000955,1.86e-34,47;UBERON:0006238,1.86e-34,47;UBERON:0002616,7.82e-33,46;UBERON:0002346,1.82e-31,64;UBERON:0003075,1.82e-31,64;UBERON:0007284,1.82e-31,64;UBERON:0003528,5.15e-30,29;UBERON:0002791,5.15e-30,29;UBERON:0001893,5.15e-30,29;UBERON:0004121,3.58e-28,95;UBERON:0000924,3.58e-28,95;UBERON:0006601,3.58e-28,95;UBERON:0003080,2.56e-27,40;UBERON:0010371,1.20e-26,73;UBERON:0002780,1.17e-25,39;UBERON:0001890,1.17e-25,39;UBERON:0006240,1.17e-25,39;UBERON:0002021,9.00e-24,10;UBERON:0000411,9.00e-24,10;UBERON:0001950,9.00e-24,10;UBERON:0003056,3.43e-21,49;UBERON:0010314,1.46e-19,92;UBERON:0000956,1.95e-19,21;UBERON:0001869,1.95e-19,21;UBERON:0000203,1.95e-19,21;UBERON:0002619,2.49e-18,17;UBERON:0000025,2.08e-15,114;UBERON:0004111,6.91e-14,122;UBERON:0003076,2.88e-13,12;UBERON:0003057,2.88e-13,12;UBERON:0002420,9.41e-12,8;UBERON:0007245,9.41e-12,8;UBERON:0010009,9.41e-12,8;UBERON:0010011,9.41e-12,8;UBERON:0000454,9.41e-12,8;UBERON:0011216,2.53e-10,194;UBERON:0002950,9.01e-09,4;UBERON:0001891,9.01e-09,4;UBERON:0009616,9.01e-09,4;UBERON:0010286,9.01e-09,4;UBERON:0002240,1.70e-08,6;UBERON:0005174,1.70e-08,6;UBERON:0001137,1.70e-08,6;UBERON:0000483,2.04e-07,174;UBERON:0004684,2.73e-07,3;UBERON:0002275,2.73e-07,3;UBERON:0000119,3.04e-07,176;UBERON:0002038,6.28e-07,3;UBERON:0009663,6.28e-07,3;UBERON:0009661,6.28e-07,3;UBERON:0000125,6.28e-07,3;UBERON:0002308,6.28e-07,3 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.935476191661768,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.41621522601718,2.11596391708813,0,0,0,0,0,0,0,0,0.725827286159344,1.62007125998029,0.630974884054146,2.28520787523043,2.42955395046775,0.367472397644862,0.191690942036473,0.919218786610021,3.30347642998166,6.12899222808901,5.83704826373725,1.58263545276233,3.56801810049398,2.6045668527838,3.62937898701795,4.50210088025344,2.90316670775939,2.65165726926301,3.98640706237488,0.745597783301202,0,0,0,0,0,0,0,0.448026887097336,0,0,0,0,0,0,0,0,0,0,0,0.5709193985953,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.14839673724249,10.2628886338593,0,0,0,0,4.49371918214468,3.20250421973039,0.628271760564322,10.4294592115366,11.2514801225345,4.77912502486988,4.54275536589721,0,0,0,0,0,0.229902104433473,0,0,0.272145996605311,0.2562274405697,0.281105173679186,0.776110112217047,0,0,0,0,0,0,0,0,0,0,0,0,0.234526059981096,0.180062061461015,0,0,0.154267112887378,0,0,0,0,0,0,0,0,0,2.94405927989778,3.08713837137853,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.43768206527355,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.77982123956051,5.97779601620236,0,0,0,0,0,0,0,0,0,0.292255857911312,0,2.89189184779626,0,0,0,0.164970122972535,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178368817602071,0,0.304464949114599,0,0,0,0.16488625294148,0,0.0603129249281559,0,0,0,7.04616147639937,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.149516546043979,0.330916980914195,0,0,0,0,0,0.104859344425711,0,0,0,0.202725215290164,0,0,0,0,0.120195449519969,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,11.2950368523413,14.2700823317225,18.3326564300607,25.4342709868658,6.85082519770642,15.107877947794,10.1253375034771,14.8605997063993,13.5942722695261,11.9084871702919,0,0,0.512200817262403,0.243106717068294,0.209613162627982,0,0.44449345560323,0.412070114477788,0.320919209591815,0,0.25347929989024,0.377252682772152,0.561849044819294,0.256100609619477,0.34461281373368,0.476293691283074,0.347652977834566,0.38581844092741,0.412085900803307,0.588795680537589,0.342869252385415,0.532427418478012,0.238436189947321,0.581385666529314,0.658765662907314,0.507687647350059,0.182927972872773,1.05227884575137,0.271608227691724,0.561142271657738,0.355905054372522,0.0985044823755635,0.818462086339379,0.619747364743864,0.771626443924566,0,0.233931608445408,0.644613162144895,0.191288332068843,0,0 | |||
|short_description=p7@Ntm | |||
}} |
Revision as of 23:32, 4 August 2015
Short description: | p7@Ntm |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_7_at_Ntm_5end |
Coexpression cluster: | MCL_coexpression_mm9:2 |
Association with transcript: | 72bp_to_ENSMUST00000146651_5end |
EntrezGene: | 235106 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 4.84e-19 | 23 |
neuroblast (sensu Vertebrata) | 4.84e-19 | 23 |
neuron | 3.66e-12 | 33 |
neuronal stem cell | 3.66e-12 | 33 |
neuroblast | 3.66e-12 | 33 |
electrically signaling cell | 3.66e-12 | 33 |
electrically responsive cell | 9.58e-10 | 39 |
electrically active cell | 9.58e-10 | 39 |
neural cell | 1.63e-08 | 43 |
ectodermal cell | 3.04e-08 | 44 |
neurectodermal cell | 3.04e-08 | 44 |
raphe nuclei neuron | 2.73e-07 | 3 |
neuron of the substantia nigra | 6.28e-07 | 3 |