FFCP PHASE1:Mm9::chr12:50483663..50483678,+: Difference between revisions
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{{FFCP|EntrezGene=15228|HGNC=|MCL_coexpression_id=76|UniProt=|association_with_transcript=-1bp_to_ENSMUST00000135006_5end|description=CAGE_peak_3_at_Foxg1_5end|id=chr12:50483663..50483678,+|ontology_enrichment_celltype=CL:0002609!2.79e-09!6|ontology_enrichment_celltype_v019_2=CL:0002609,8.48e-22,6;CL:0002608,1.57e-11,3;CL:0002605,1.81e-07,2;CL:0002604,1.81e-07,2;CL:0000117,6.47e-07,23;CL:0000337,6.47e-07,23|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002791!2.87e-21!29;UBERON:0003528!2.87e-21!29;UBERON:0001893!2.87e-21!29;UBERON:0000956!4.66e-18!21;UBERON:0001869!4.66e-18!21;UBERON:0000203!4.66e-18!21;UBERON:0002780!1.31e-17!39;UBERON:0001890!1.31e-17!39;UBERON:0006240!1.31e-17!39;UBERON:0003080!6.11e-17!40;UBERON:0002020!6.62e-17!34;UBERON:0000955!2.13e-14!50;UBERON:0006238!2.13e-14!50;UBERON:0002616!1.62e-13!49;UBERON:0002619!4.10e-13!17;UBERON:0001049!3.21e-12!52;UBERON:0005068!3.21e-12!52;UBERON:0006241!3.21e-12!52;UBERON:0007135!3.21e-12!52;UBERON:0003056!3.29e-12!49;UBERON:0000033!1.89e-10!63;UBERON:0007811!4.38e-10!86;UBERON:0001954!6.47e-10!7;UBERON:0003022!6.47e-10!7;UBERON:0002421!6.47e-10!7;UBERON:0000349!6.47e-10!7;UBERON:0002600!6.47e-10!7;UBERON:0001017!1.63e-08!73;UBERON:0005743!1.63e-08!73;UBERON:0000153!2.50e-08!94;UBERON:0000073!4.72e-08!75;UBERON:0001016!4.72e-08!75;UBERON:0002346!9.77e-07!71;UBERON:0003075!9.77e-07!71;UBERON:0007284!9.77e-07!71|ontology_enrichment_uberon_v019_2=UBERON:0003528,3.03e-31,29;UBERON:0002791,3.03e-31,29;UBERON:0001893,3.03e-31,29;UBERON:0000956,1.57e-29,21;UBERON:0001869,1.57e-29,21;UBERON:0000203,1.57e-29,21;UBERON:0002020,3.76e-26,34;UBERON:0000955,1.83e-25,47;UBERON:0006238,1.83e-25,47;UBERON:0002780,3.23e-25,39;UBERON:0001890,3.23e-25,39;UBERON:0006240,3.23e-25,39;UBERON:0003080,1.69e-24,40;UBERON:0001954,1.83e-23,7;UBERON:0003022,1.83e-23,7;UBERON:0002421,1.83e-23,7;UBERON:0000349,1.83e-23,7;UBERON:0002600,1.83e-23,7;UBERON:0002616,2.11e-23,46;UBERON:0001049,2.87e-20,52;UBERON:0005068,2.87e-20,52;UBERON:0006241,2.87e-20,52;UBERON:0007135,2.87e-20,52;UBERON:0000073,2.23e-19,54;UBERON:0003056,2.45e-19,49;UBERON:0002619,3.94e-18,17;UBERON:0002346,9.29e-16,64;UBERON:0003075,9.29e-16,64;UBERON:0007284,9.29e-16,64;UBERON:0001017,5.36e-15,73;UBERON:0001016,1.72e-14,75;UBERON:0010371,2.40e-13,73;UBERON:0004121,1.33e-10,95;UBERON:0000924,1.33e-10,95;UBERON:0006601,1.33e-10,95;UBERON:0010314,8.39e-10,92;UBERON:0000025,3.56e-07,114;UBERON:0000369,7.17e-07,5;UBERON:0002435,7.17e-07,5;UBERON:0000204,7.17e-07,5;UBERON:0010082,7.17e-07,5|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125896817975577,0.405507724878058,0.917733760808408,0,1.30815093828268,1.09843091367236,2.13872888981712,0.279972843250725,0,0,0,0,0,0,0.515672092277442,0,0,0,0.338844532069132,0,0,0,0,0.898800331555214,0,20.2194744001531,20.7909145030804,17.6672967535161,0,0,8.08439274818697,9.58454710182364,6.43453150627015,0,0,0,0.395658863190582,0.0914876436024097,2.08365348222704,0,0,0.15279824777681,0,0,0,0,0,0,0,0,0,0,0,0,0.511290967734173,0.259786004602869,0,0.563373679106722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.83000241127451,7.28795242254614,1.56441888173049,1.79000820131231,0,1.29793010454206,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.26173969138476,6.99751364179134,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.14754461763673,0,0,0,0,0,0,0,0,0,0,1.28528526568723,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129358683782755,0,0,0,0.164549020602121,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0826534557253359,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.316011120628178,0.405450430580328,0.308132871494482,0.389762468933385,0,0.198681354781265,0,0,0,0.15241361331,0.100826185136841,0,0.192423683280659,0,0,0,0,0,0,0,0,0,0,0,1.38097570952153,1.14579102687879,1.20297227640581,0.685082519770642,0.755393897389701,0,0.900642406448441,0.906284817968409,0,0.62272408550506,0,0.341467211508268,1.70174701947806,0.628839487883947,0.551530525350042,0.666740183404846,1.03017528619447,0.320919209591815,0.252697211763798,0.50695859978048,0.377252682772152,0.37456602987953,0.768301828858431,1.03383844120104,0,0.463537303779422,0.578727661391115,0.412085900803307,0.735994600671987,0.342869252385415,0.532427418478012,1.1921809497366,0.726732083161643,0.846984423737976,0.507687647350059,0.73171189149109,0.526139422875686,0.135804113845862,0,0.237270036248348,0.394017929502254,0,0.464810523557898,0.192906610981141,1.24905288968973,0.233931608445408,0.214871054048298,0,0,0|short_description=p3@Foxg1}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:15228 | |||
|HGNC= | |||
|MCL_coexpression_id=76 | |||
|TSSclassifier=NA | |||
|UniProt= | |||
|association_with_transcript=-1bp_to_ENSMUST00000135006_5end | |||
|cluster_id=chr12:50483663..50483678,+ | |||
|description=CAGE_peak_3_at_Foxg1_5end | |||
|id=chr12:50483663..50483678,+ | |||
|ontology_enrichment_celltype=CL:0002609!2.79e-09!6 | |||
|ontology_enrichment_celltype_v019_2=CL:0002609,8.48e-22,6;CL:0002608,1.57e-11,3;CL:0002605,1.81e-07,2;CL:0002604,1.81e-07,2;CL:0000117,6.47e-07,23;CL:0000337,6.47e-07,23 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002791!2.87e-21!29;UBERON:0003528!2.87e-21!29;UBERON:0001893!2.87e-21!29;UBERON:0000956!4.66e-18!21;UBERON:0001869!4.66e-18!21;UBERON:0000203!4.66e-18!21;UBERON:0002780!1.31e-17!39;UBERON:0001890!1.31e-17!39;UBERON:0006240!1.31e-17!39;UBERON:0003080!6.11e-17!40;UBERON:0002020!6.62e-17!34;UBERON:0000955!2.13e-14!50;UBERON:0006238!2.13e-14!50;UBERON:0002616!1.62e-13!49;UBERON:0002619!4.10e-13!17;UBERON:0001049!3.21e-12!52;UBERON:0005068!3.21e-12!52;UBERON:0006241!3.21e-12!52;UBERON:0007135!3.21e-12!52;UBERON:0003056!3.29e-12!49;UBERON:0000033!1.89e-10!63;UBERON:0007811!4.38e-10!86;UBERON:0001954!6.47e-10!7;UBERON:0003022!6.47e-10!7;UBERON:0002421!6.47e-10!7;UBERON:0000349!6.47e-10!7;UBERON:0002600!6.47e-10!7;UBERON:0001017!1.63e-08!73;UBERON:0005743!1.63e-08!73;UBERON:0000153!2.50e-08!94;UBERON:0000073!4.72e-08!75;UBERON:0001016!4.72e-08!75;UBERON:0002346!9.77e-07!71;UBERON:0003075!9.77e-07!71;UBERON:0007284!9.77e-07!71 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003528,3.03e-31,29;UBERON:0002791,3.03e-31,29;UBERON:0001893,3.03e-31,29;UBERON:0000956,1.57e-29,21;UBERON:0001869,1.57e-29,21;UBERON:0000203,1.57e-29,21;UBERON:0002020,3.76e-26,34;UBERON:0000955,1.83e-25,47;UBERON:0006238,1.83e-25,47;UBERON:0002780,3.23e-25,39;UBERON:0001890,3.23e-25,39;UBERON:0006240,3.23e-25,39;UBERON:0003080,1.69e-24,40;UBERON:0001954,1.83e-23,7;UBERON:0003022,1.83e-23,7;UBERON:0002421,1.83e-23,7;UBERON:0000349,1.83e-23,7;UBERON:0002600,1.83e-23,7;UBERON:0002616,2.11e-23,46;UBERON:0001049,2.87e-20,52;UBERON:0005068,2.87e-20,52;UBERON:0006241,2.87e-20,52;UBERON:0007135,2.87e-20,52;UBERON:0000073,2.23e-19,54;UBERON:0003056,2.45e-19,49;UBERON:0002619,3.94e-18,17;UBERON:0002346,9.29e-16,64;UBERON:0003075,9.29e-16,64;UBERON:0007284,9.29e-16,64;UBERON:0001017,5.36e-15,73;UBERON:0001016,1.72e-14,75;UBERON:0010371,2.40e-13,73;UBERON:0004121,1.33e-10,95;UBERON:0000924,1.33e-10,95;UBERON:0006601,1.33e-10,95;UBERON:0010314,8.39e-10,92;UBERON:0000025,3.56e-07,114;UBERON:0000369,7.17e-07,5;UBERON:0002435,7.17e-07,5;UBERON:0000204,7.17e-07,5;UBERON:0010082,7.17e-07,5 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125896817975577,0.405507724878058,0.917733760808408,0,1.30815093828268,1.09843091367236,2.13872888981712,0.279972843250725,0,0,0,0,0,0,0.515672092277442,0,0,0,0.338844532069132,0,0,0,0,0.898800331555214,0,20.2194744001531,20.7909145030804,17.6672967535161,0,0,8.08439274818697,9.58454710182364,6.43453150627015,0,0,0,0.395658863190582,0.0914876436024097,2.08365348222704,0,0,0.15279824777681,0,0,0,0,0,0,0,0,0,0,0,0,0.511290967734173,0.259786004602869,0,0.563373679106722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.83000241127451,7.28795242254614,1.56441888173049,1.79000820131231,0,1.29793010454206,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.26173969138476,6.99751364179134,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.14754461763673,0,0,0,0,0,0,0,0,0,0,1.28528526568723,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129358683782755,0,0,0,0.164549020602121,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0826534557253359,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.316011120628178,0.405450430580328,0.308132871494482,0.389762468933385,0,0.198681354781265,0,0,0,0.15241361331,0.100826185136841,0,0.192423683280659,0,0,0,0,0,0,0,0,0,0,0,1.38097570952153,1.14579102687879,1.20297227640581,0.685082519770642,0.755393897389701,0,0.900642406448441,0.906284817968409,0,0.62272408550506,0,0.341467211508268,1.70174701947806,0.628839487883947,0.551530525350042,0.666740183404846,1.03017528619447,0.320919209591815,0.252697211763798,0.50695859978048,0.377252682772152,0.37456602987953,0.768301828858431,1.03383844120104,0,0.463537303779422,0.578727661391115,0.412085900803307,0.735994600671987,0.342869252385415,0.532427418478012,1.1921809497366,0.726732083161643,0.846984423737976,0.507687647350059,0.73171189149109,0.526139422875686,0.135804113845862,0,0.237270036248348,0.394017929502254,0,0.464810523557898,0.192906610981141,1.24905288968973,0.233931608445408,0.214871054048298,0,0,0 | |||
|short_description=p3@Foxg1 | |||
}} |
Revision as of 01:59, 5 August 2015
Short description: | p3@Foxg1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Foxg1_5end |
Coexpression cluster: | MCL_coexpression_mm9:76 |
Association with transcript: | -1bp_to_ENSMUST00000135006_5end |
EntrezGene: | 15228 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron of cerebral cortex | 8.48e-22 | 6 |
hippocampal neuron | 1.57e-11 | 3 |
astrocyte of the cerebral cortex | 1.81e-07 | 2 |
astrocyte of the hippocampus | 1.81e-07 | 2 |
CNS neuron (sensu Vertebrata) | 6.47e-07 | 23 |
neuroblast (sensu Vertebrata) | 6.47e-07 | 23 |