FFCP PHASE1:Mm9::chr1:162281995..162282065,-: Difference between revisions
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{{FFCP|EntrezGene=29809|HGNC=|MCL_coexpression_id=1|UniProt=A6H6A9|association_with_transcript=-293bp_to_ENSMUST00000028052,NM_001038621,uc007deh.1_5end|description=CAGE_peak_6_at_Rabgap1l_5end|id=chr1:162281995..162282065,-|ontology_enrichment_celltype=CL:0000540!7.05e-14!33;CL:0000047!7.05e-14!33;CL:0000031!7.05e-14!33;CL:0000404!7.05e-14!33;CL:0000117!3.80e-13!23;CL:0000337!3.80e-13!23;CL:0000393!8.22e-10!39;CL:0000211!8.22e-10!39;CL:0000221!9.94e-10!44;CL:0000133!9.94e-10!44;CL:0002319!1.36e-09!43|ontology_enrichment_celltype_v019_2=CL:0000117,2.07e-17,23;CL:0000337,2.07e-17,23;CL:0000540,4.48e-17,33;CL:0000047,4.48e-17,33;CL:0000031,4.48e-17,33;CL:0000404,4.48e-17,33;CL:0000393,1.09e-12,39;CL:0000211,1.09e-12,39;CL:0000221,3.05e-12,44;CL:0000133,3.05e-12,44;CL:0002319,4.68e-12,43|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!7.10e-23!73;UBERON:0005743!7.10e-23!73;UBERON:0000073!3.64e-22!75;UBERON:0001016!3.64e-22!75;UBERON:0004121!6.43e-20!102;UBERON:0000924!6.43e-20!102;UBERON:0006601!6.43e-20!102;UBERON:0001049!6.28e-18!52;UBERON:0005068!6.28e-18!52;UBERON:0006241!6.28e-18!52;UBERON:0007135!6.28e-18!52;UBERON:0002020!2.47e-17!34;UBERON:0000955!4.95e-17!50;UBERON:0006238!4.95e-17!50;UBERON:0002346!7.28e-17!71;UBERON:0003075!7.28e-17!71;UBERON:0007284!7.28e-17!71;UBERON:0000033!1.00e-16!63;UBERON:0002616!2.48e-16!49;UBERON:0002791!1.83e-14!29;UBERON:0003528!1.83e-14!29;UBERON:0001893!1.83e-14!29;UBERON:0003080!3.52e-13!40;UBERON:0002780!1.28e-12!39;UBERON:0001890!1.28e-12!39;UBERON:0006240!1.28e-12!39;UBERON:0003056!1.37e-12!49;UBERON:0000956!2.02e-10!21;UBERON:0001869!2.02e-10!21;UBERON:0000203!2.02e-10!21;UBERON:0002021!2.39e-08!10;UBERON:0000411!2.39e-08!10;UBERON:0001950!2.39e-08!10;UBERON:0002619!3.44e-08!17|ontology_enrichment_uberon_v019_2=UBERON:0001017,9.85e-29,73;UBERON:0001016,2.39e-27,75;UBERON:0000073,1.58e-24,54;UBERON:0002020,2.95e-24,34;UBERON:0001049,8.72e-23,52;UBERON:0005068,8.72e-23,52;UBERON:0006241,8.72e-23,52;UBERON:0007135,8.72e-23,52;UBERON:0002346,1.10e-21,64;UBERON:0003075,1.10e-21,64;UBERON:0007284,1.10e-21,64;UBERON:0004121,1.97e-21,95;UBERON:0000924,1.97e-21,95;UBERON:0006601,1.97e-21,95;UBERON:0003528,2.70e-20,29;UBERON:0002791,2.70e-20,29;UBERON:0001893,2.70e-20,29;UBERON:0000955,4.32e-19,47;UBERON:0006238,4.32e-19,47;UBERON:0010371,6.59e-19,73;UBERON:0002616,3.53e-18,46;UBERON:0003080,1.54e-16,40;UBERON:0002780,8.76e-16,39;UBERON:0001890,8.76e-16,39;UBERON:0006240,8.76e-16,39;UBERON:0000956,9.93e-15,21;UBERON:0001869,9.93e-15,21;UBERON:0000203,9.93e-15,21;UBERON:0003056,1.62e-14,49;UBERON:0010314,2.25e-12,92;UBERON:0002619,1.21e-11,17;UBERON:0002021,7.54e-11,10;UBERON:0000411,7.54e-11,10;UBERON:0001950,7.54e-11,10;UBERON:0003076,6.27e-07,12;UBERON:0003057,6.27e-07,12;UBERON:0002420,9.72e-07,8;UBERON:0007245,9.72e-07,8;UBERON:0010009,9.72e-07,8;UBERON:0010011,9.72e-07,8;UBERON:0000454,9.72e-07,8|phase1_expression=1.28119077683835,0,0,0,0,0.16787927191189,0.233612640595526,0,0,0,0,0,0,0,0,0.202475267389826,0,0,0,0,3.74190476664707,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.503587271902309,0.304130793658544,0,0,0.65407546914134,0,0,0.139986421625363,0,0,0.725362142011344,0,0,0,0,5.26022798234954,10.0508286061686,6.97214543856797,0.338844532069132,0,0,0,0,1.49800055259202,1.53687322128622,15.3460626216547,15.7956947848078,10.5162480675691,7.42692559449889,7.73039893330647,7.10446635446733,3.06705507258356,7.35375029288017,23.1243350098716,22.7283461791634,29.4924543851987,5.01167893374737,6.31264740856627,6.25096044668112,12.5632349550621,14.069065250792,16.0438160165651,25.6326869362091,25.3421591822403,8.76077395378913,0.151452386666368,0.453429360640713,0,0,0,0,0.649776417447669,0,0.702222100658759,0.511290967734173,0.519572009205738,0,1.12674735821344,0,0,0,0,0,0.505524445014783,0.11418387971906,0.776813650941515,0.593768556259299,0.173485326766136,2.13125834818499,0.230615497256059,0.60289056221049,1.05829836422134,0,0.494389935468748,1.01219549843938,0,0.808834249737046,0.441683036920787,1.45462575940567,0,24.8863677459815,17.8029700791437,0.255457055208591,0.11981512450592,0,0.127070227073065,20.0719456802462,17.3850229071078,4.90051973240171,38.9366477230699,30.4301394223093,20.5710164113964,23.8494656709604,2.34230536855727,0.622034853050465,0.758168275301024,0.631325567659422,0.130120442962704,0,0.720248519221397,0.753524089178575,1.56483948048054,1.2811372028485,1.03071897015702,4.9153640440413,0,0.378212160335639,0,0,0,2.78601733217733,2.26360350048738,0.796137067273973,0,0.772043721344145,0.568326998791185,0.207125772535502,0.938104239924385,0.900310307305074,0.23674473558521,0.983821158737019,1.07986979021165,0.465067889500816,0.268273401399619,0.583826711835847,0.16455984991348,0.820837320395476,0.0810688095458557,0.146199987425332,0.219550115291051,0.268412837520744,38.062480690107,14.097931895962,0,0,0.213288250535234,0,1.03093969057675,0.80673409849337,1.33426826306922,0.760902504450237,1.4235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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:29809 | |||
|HGNC= | |||
|MCL_coexpression_id=1 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:A6H6A9 | |||
|association_with_transcript=-293bp_to_ENSMUST00000028052,NM_001038621,uc007deh.1_5end | |||
|cluster_id=chr1:162281995..162282065,- | |||
|description=CAGE_peak_6_at_Rabgap1l_5end | |||
|id=chr1:162281995..162282065,- | |||
|ontology_enrichment_celltype=CL:0000540!7.05e-14!33;CL:0000047!7.05e-14!33;CL:0000031!7.05e-14!33;CL:0000404!7.05e-14!33;CL:0000117!3.80e-13!23;CL:0000337!3.80e-13!23;CL:0000393!8.22e-10!39;CL:0000211!8.22e-10!39;CL:0000221!9.94e-10!44;CL:0000133!9.94e-10!44;CL:0002319!1.36e-09!43 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,2.07e-17,23;CL:0000337,2.07e-17,23;CL:0000540,4.48e-17,33;CL:0000047,4.48e-17,33;CL:0000031,4.48e-17,33;CL:0000404,4.48e-17,33;CL:0000393,1.09e-12,39;CL:0000211,1.09e-12,39;CL:0000221,3.05e-12,44;CL:0000133,3.05e-12,44;CL:0002319,4.68e-12,43 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!7.10e-23!73;UBERON:0005743!7.10e-23!73;UBERON:0000073!3.64e-22!75;UBERON:0001016!3.64e-22!75;UBERON:0004121!6.43e-20!102;UBERON:0000924!6.43e-20!102;UBERON:0006601!6.43e-20!102;UBERON:0001049!6.28e-18!52;UBERON:0005068!6.28e-18!52;UBERON:0006241!6.28e-18!52;UBERON:0007135!6.28e-18!52;UBERON:0002020!2.47e-17!34;UBERON:0000955!4.95e-17!50;UBERON:0006238!4.95e-17!50;UBERON:0002346!7.28e-17!71;UBERON:0003075!7.28e-17!71;UBERON:0007284!7.28e-17!71;UBERON:0000033!1.00e-16!63;UBERON:0002616!2.48e-16!49;UBERON:0002791!1.83e-14!29;UBERON:0003528!1.83e-14!29;UBERON:0001893!1.83e-14!29;UBERON:0003080!3.52e-13!40;UBERON:0002780!1.28e-12!39;UBERON:0001890!1.28e-12!39;UBERON:0006240!1.28e-12!39;UBERON:0003056!1.37e-12!49;UBERON:0000956!2.02e-10!21;UBERON:0001869!2.02e-10!21;UBERON:0000203!2.02e-10!21;UBERON:0002021!2.39e-08!10;UBERON:0000411!2.39e-08!10;UBERON:0001950!2.39e-08!10;UBERON:0002619!3.44e-08!17 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,9.85e-29,73;UBERON:0001016,2.39e-27,75;UBERON:0000073,1.58e-24,54;UBERON:0002020,2.95e-24,34;UBERON:0001049,8.72e-23,52;UBERON:0005068,8.72e-23,52;UBERON:0006241,8.72e-23,52;UBERON:0007135,8.72e-23,52;UBERON:0002346,1.10e-21,64;UBERON:0003075,1.10e-21,64;UBERON:0007284,1.10e-21,64;UBERON:0004121,1.97e-21,95;UBERON:0000924,1.97e-21,95;UBERON:0006601,1.97e-21,95;UBERON:0003528,2.70e-20,29;UBERON:0002791,2.70e-20,29;UBERON:0001893,2.70e-20,29;UBERON:0000955,4.32e-19,47;UBERON:0006238,4.32e-19,47;UBERON:0010371,6.59e-19,73;UBERON:0002616,3.53e-18,46;UBERON:0003080,1.54e-16,40;UBERON:0002780,8.76e-16,39;UBERON:0001890,8.76e-16,39;UBERON:0006240,8.76e-16,39;UBERON:0000956,9.93e-15,21;UBERON:0001869,9.93e-15,21;UBERON:0000203,9.93e-15,21;UBERON:0003056,1.62e-14,49;UBERON:0010314,2.25e-12,92;UBERON:0002619,1.21e-11,17;UBERON:0002021,7.54e-11,10;UBERON:0000411,7.54e-11,10;UBERON:0001950,7.54e-11,10;UBERON:0003076,6.27e-07,12;UBERON:0003057,6.27e-07,12;UBERON:0002420,9.72e-07,8;UBERON:0007245,9.72e-07,8;UBERON:0010009,9.72e-07,8;UBERON:0010011,9.72e-07,8;UBERON:0000454,9.72e-07,8 | |||
|phase1_expression=1.28119077683835,0,0,0,0,0.16787927191189,0.233612640595526,0,0,0,0,0,0,0,0,0.202475267389826,0,0,0,0,3.74190476664707,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.503587271902309,0.304130793658544,0,0,0.65407546914134,0,0,0.139986421625363,0,0,0.725362142011344,0,0,0,0,5.26022798234954,10.0508286061686,6.97214543856797,0.338844532069132,0,0,0,0,1.49800055259202,1.53687322128622,15.3460626216547,15.7956947848078,10.5162480675691,7.42692559449889,7.73039893330647,7.10446635446733,3.06705507258356,7.35375029288017,23.1243350098716,22.7283461791634,29.4924543851987,5.01167893374737,6.31264740856627,6.25096044668112,12.5632349550621,14.069065250792,16.0438160165651,25.6326869362091,25.3421591822403,8.76077395378913,0.151452386666368,0.453429360640713,0,0,0,0,0.649776417447669,0,0.702222100658759,0.511290967734173,0.519572009205738,0,1.12674735821344,0,0,0,0,0,0.505524445014783,0.11418387971906,0.776813650941515,0.593768556259299,0.173485326766136,2.13125834818499,0.230615497256059,0.60289056221049,1.05829836422134,0,0.494389935468748,1.01219549843938,0,0.808834249737046,0.441683036920787,1.45462575940567,0,24.8863677459815,17.8029700791437,0.255457055208591,0.11981512450592,0,0.127070227073065,20.0719456802462,17.3850229071078,4.90051973240171,38.9366477230699,30.4301394223093,20.5710164113964,23.8494656709604,2.34230536855727,0.622034853050465,0.758168275301024,0.631325567659422,0.130120442962704,0,0.720248519221397,0.753524089178575,1.56483948048054,1.2811372028485,1.03071897015702,4.9153640440413,0,0.378212160335639,0,0,0,2.78601733217733,2.26360350048738,0.796137067273973,0,0.772043721344145,0.568326998791185,0.207125772535502,0.938104239924385,0.900310307305074,0.23674473558521,0.983821158737019,1.07986979021165,0.465067889500816,0.268273401399619,0.583826711835847,0.16455984991348,0.820837320395476,0.0810688095458557,0.146199987425332,0.219550115291051,0.268412837520744,38.062480690107,14.097931895962,0,0,0.213288250535234,0,1.03093969057675,0.80673409849337,1.33426826306922,0.760902504450237,1.42358718463353,0.823494773620054,1.25667604400135,0.397912944082302,0.19496408711912,1.79763881730844,0.216138049874694,0.199141273254367,0,0.571242563048644,0,0,0.387904974335251,0.0701358198903186,0.189709611372772,0,0,0,0,0,0,0.224862112384854,0.405720242777006,0,0,0,0,0.549122826376163,1.43768206527355,0.372140947668503,0,0,0,0,0,0.37898282354097,0.651859905768103,0.509235257325564,0.704070744865506,0.502518772325447,0.476087281772027,0.390267295715598,0.788175720530955,1.99318220683897,0.478364305972461,0,0.345369963731791,0,0,0.54390568381871,0,0.551873492609465,15.0917554588524,24.1456074379939,0.163934945376675,0,1.26203287766503,1.95219372148319,3.01592756825919,0.955875191810208,1.11399337041197,1.13230612315533,1.61924280669958,2.63030272120181,0.395287777946524,53.0180172095982,3.26462195979018,2.13678724400706,2.44330439030364,4.78413356620353,0,0.971122544619926,0,0.754420319023592,0.590603785761546,0.922305443831782,0,0.363533729477506,1.06949213515416,0.316036757935816,0,0,0.340439605753788,0.540183282093931,0.258717367565509,0.643011105094777,0,0.356737635204141,1.15184314421485,0.304464949114599,0,0.63549621259146,0.882113592219848,0.65954501176592,0.807322133479528,1.08563264870681,0.119372344003136,0.328281799490123,0.582961673259701,21.1384844291981,0,0.412773735926445,0.370389054739423,0.188368457004691,0,0,0,0,0,0.954670618015114,0,0.609958401380546,1.18805874903981,0.836353184057875,2.40198820120795,0.539457385539283,1.32245529160537,0.523511883968059,0,0.621339313086926,0,0.299033092087958,0,0.194451188344048,0.774958940866387,1.01373675294467,1.76035857968631,0.39061315453185,0.314578033277133,0,0.288030006257865,0,0,0.205421914329655,0,0,0.198681354781265,0.120195449519969,0.147689527174577,0,0,0,0.0974578807397524,0.192423683280659,0,0.906921534460845,0,0,0.167884616364078,0.579568782096571,0.93841237725591,0.183151624267265,0.214368379079066,1.00314420807073,60.4284471600261,64.4455331110048,51.5605962095457,45.1973869563898,34.9392085083028,43.0574521512129,43.8764625150674,37.8269810708345,46.6736681253731,39.8675440048901,0.93408612825759,1.59609949360412,1.70733605754134,1.45864030240976,2.51535795153579,2.5738091183002,2.889207461421,3.91466608753899,3.85103051510178,4.29585259998456,2.28131369901216,3.58390048633545,3.65201879132541,3.00918216302886,3.15895079255873,2.85776214769844,2.20180219295225,2.70072908649187,2.06042950401653,4.12156976376312,5.14303878578123,3.37204031702741,2.38436189947321,3.0522747492789,2.91739079287525,3.21535509988371,4.20734337607377,3.41990624869196,3.80251518768413,0.561142271657738,3.2031454893527,1.57607171800902,3.27384834535751,3.09873682371932,2.70069255373598,3.74715866906919,3.04111090979031,1.93383948643468,1.72159498861959,0.661774257358546,0.927471342481686 | |||
|short_description=p6@Rabgap1l | |||
}} |
Revision as of 02:32, 5 August 2015
Short description: | p6@Rabgap1l |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_6_at_Rabgap1l_5end |
Coexpression cluster: | MCL_coexpression_mm9:1 |
Association with transcript: | -293bp_to_ENSMUST00000028052, NM_001038621, uc007deh.1_5end |
EntrezGene: | 29809 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 2.07e-17 | 23 |
neuroblast (sensu Vertebrata) | 2.07e-17 | 23 |
neuron | 4.48e-17 | 33 |
neuronal stem cell | 4.48e-17 | 33 |
neuroblast | 4.48e-17 | 33 |
electrically signaling cell | 4.48e-17 | 33 |
electrically responsive cell | 1.09e-12 | 39 |
electrically active cell | 1.09e-12 | 39 |
ectodermal cell | 3.05e-12 | 44 |
neurectodermal cell | 3.05e-12 | 44 |
neural cell | 4.68e-12 | 43 |