FFCP PHASE1:Mm9::chr6:124414790..124414801,-: Difference between revisions
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{{FFCP|EntrezGene=232370|HGNC=|MCL_coexpression_id=1|UniProt=Q99JH7|association_with_transcript=0bp_to_NM_153508,uc009dqw.2_5end|description=CAGE_peak_5_at_Clstn3_5end|id=chr6:124414790..124414801,-|ontology_enrichment_celltype=CL:0000117!1.10e-14!23;CL:0000337!1.10e-14!23;CL:0000540!1.21e-10!33;CL:0000047!1.21e-10!33;CL:0000031!1.21e-10!33;CL:0000404!1.21e-10!33;CL:0000393!1.15e-07!39;CL:0000211!1.15e-07!39|ontology_enrichment_celltype_v019_2=CL:0000117,3.23e-18,23;CL:0000337,3.23e-18,23;CL:0000540,1.08e-11,33;CL:0000047,1.08e-11,33;CL:0000031,1.08e-11,33;CL:0000404,1.08e-11,33;CL:0000393,2.13e-09,39;CL:0000211,2.13e-09,39;CL:0002614,5.92e-09,3;CL:0002610,1.12e-08,3;CL:0002319,3.13e-08,43;CL:0000221,5.68e-08,44;CL:0000133,5.68e-08,44;CL:0002612,1.07e-07,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001049!2.07e-31!52;UBERON:0005068!2.07e-31!52;UBERON:0006241!2.07e-31!52;UBERON:0007135!2.07e-31!52;UBERON:0000955!1.34e-29!50;UBERON:0006238!1.34e-29!50;UBERON:0002616!7.35e-29!49;UBERON:0002346!9.11e-29!71;UBERON:0003075!9.11e-29!71;UBERON:0007284!9.11e-29!71;UBERON:0000033!1.13e-28!63;UBERON:0001017!2.08e-28!73;UBERON:0005743!2.08e-28!73;UBERON:0000073!5.01e-27!75;UBERON:0001016!5.01e-27!75;UBERON:0003080!4.12e-24!40;UBERON:0003056!1.89e-23!49;UBERON:0002780!3.38e-23!39;UBERON:0001890!3.38e-23!39;UBERON:0006240!3.38e-23!39;UBERON:0004121!1.05e-22!102;UBERON:0000924!1.05e-22!102;UBERON:0006601!1.05e-22!102;UBERON:0002020!4.03e-21!34;UBERON:0000153!8.83e-18!94;UBERON:0002791!8.23e-17!29;UBERON:0003528!8.23e-17!29;UBERON:0001893!8.23e-17!29;UBERON:0007811!8.40e-17!86;UBERON:0000956!5.71e-11!21;UBERON:0001869!5.71e-11!21;UBERON:0000203!5.71e-11!21;UBERON:0002021!3.42e-09!10;UBERON:0000411!3.42e-09!10;UBERON:0001950!3.42e-09!10;UBERON:0002619!1.11e-08!17;UBERON:0000025!4.36e-08!114;UBERON:0004111!5.57e-08!122;UBERON:0003076!1.27e-07!12;UBERON:0003057!1.27e-07!12;UBERON:0000475!1.73e-07!200;UBERON:0001894!2.73e-07!10;UBERON:0006222!2.73e-07!10;UBERON:0002420!2.97e-07!8;UBERON:0007245!2.97e-07!8;UBERON:0010009!2.97e-07!8;UBERON:0010011!2.97e-07!8;UBERON:0000454!2.97e-07!8;UBERON:0002298!4.14e-07!6|ontology_enrichment_uberon_v019_2=UBERON:0000073,5.71e-45,54;UBERON:0001049,2.04e-40,52;UBERON:0005068,2.04e-40,52;UBERON:0006241,2.04e-40,52;UBERON:0007135,2.04e-40,52;UBERON:0001017,5.77e-38,73;UBERON:0001016,9.33e-37,75;UBERON:0002020,1.52e-31,34;UBERON:0002346,1.58e-31,64;UBERON:0003075,1.58e-31,64;UBERON:0007284,1.58e-31,64;UBERON:0002616,5.58e-29,46;UBERON:0000955,3.12e-28,47;UBERON:0006238,3.12e-28,47;UBERON:0004121,1.85e-27,95;UBERON:0000924,1.85e-27,95;UBERON:0006601,1.85e-27,95;UBERON:0010371,8.92e-27,73;UBERON:0003080,3.36e-23,40;UBERON:0003528,5.57e-22,29;UBERON:0002791,5.57e-22,29;UBERON:0001893,5.57e-22,29;UBERON:0002780,1.83e-21,39;UBERON:0001890,1.83e-21,39;UBERON:0006240,1.83e-21,39;UBERON:0002021,4.11e-21,10;UBERON:0000411,4.11e-21,10;UBERON:0001950,4.11e-21,10;UBERON:0010314,8.65e-20,92;UBERON:0003076,7.86e-19,12;UBERON:0003057,7.86e-19,12;UBERON:0003056,5.61e-18,49;UBERON:0002619,1.68e-16,17;UBERON:0000956,1.78e-15,21;UBERON:0001869,1.78e-15,21;UBERON:0000203,1.78e-15,21;UBERON:0000025,1.33e-14,114;UBERON:0002240,3.32e-14,6;UBERON:0005174,3.32e-14,6;UBERON:0001137,3.32e-14,6;UBERON:0004111,3.52e-13,122;UBERON:0001948,3.96e-12,5;UBERON:0002315,3.96e-12,5;UBERON:0002950,4.10e-11,4;UBERON:0001891,4.10e-11,4;UBERON:0009616,4.10e-11,4;UBERON:0010286,4.10e-11,4;UBERON:0011216,1.48e-09,194;UBERON:0002038,5.92e-09,3;UBERON:0009663,5.92e-09,3;UBERON:0009661,5.92e-09,3;UBERON:0000125,5.92e-09,3;UBERON:0002308,5.92e-09,3;UBERON:0004684,1.12e-08,3;UBERON:0002275,1.12e-08,3;UBERON:0002257,1.07e-07,3;UBERON:0002420,1.17e-07,8;UBERON:0007245,1.17e-07,8;UBERON:0010009,1.17e-07,8;UBERON:0010011,1.17e-07,8;UBERON:0000454,1.17e-07,8;UBERON:0000483,4.03e-07,174;UBERON:0000119,5.83e-07,176;UBERON:0004733,6.93e-07,6;UBERON:0004732,6.93e-07,6;UBERON:0002028,6.93e-07,6;UBERON:0007277,6.93e-07,6|phase1_expression=0.640595388419176,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.21389876515759,0,1.26766280701236,0,0,0,0,0,0,0,0.311068836925433,0.540023753326763,0.630974884054146,3.71346279724945,3.09215957332259,0.979926393719632,0.766763768145891,0,3.30347642998166,4.72443150915195,6.60508093001847,0.395658863190582,2.37867873366265,0.52091337055676,6.42120897703176,5.06486349028512,6.87592114995646,2.65165726926301,2.98980529678116,1.86399445825301,0,0,0,0,0,0,0,0,0,0,0,0,0.422530259330042,0,0,0,0,0,0,0.11418387971906,0,0,0.173485326766136,0,0.230615497256059,0.452167921657868,0,0.125666591329675,0,0,0,0.485300549842228,0,0,0,1.75668478206928,3.77004072264219,0,0.11981512450592,0,0,2.99581278809645,0.915001205637253,1.13088916901578,3.82413504423008,2.55715457330331,2.0778804455956,2.59586020908412,0.101839363850316,0.124406970610093,0,0.631325567659422,0.130120442962704,0.689706313300419,0,0.452114453507145,0.0680364991513279,0,0.0937017245597288,0,0,0.378212160335639,0.527853372491847,0.43839146485515,0,0.348252166522167,0.205782136407943,0,0,0,0,0,0.234526059981096,0,0,0,0,0,0,0,0,0,0,0,0,0,1.05144974282064,1.13195073617213,0,0,0.213288250535234,0.232236671860439,0,0,0,0,0,0.164698954724011,0,0,0,0,0,0.199141273254367,0,0.114248512609729,0,0,0,0.140271639780637,0,0,0,0.123397163921801,0,0,0,0.224862112384854,0,0,0,0.287696137450811,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167506257441816,0,0,0,0,0,0,0,0.144649058581512,0,0,0,0,4.0137647496948,4.21962071731931,0,0,0,0,0.215423397732799,0,0,0,0,0.584511715822624,0,0.963963949265421,0,0,0,0.164970122972535,0,0,0,0.377210159511796,0,0.307435147943927,0.258428293168221,0.363533729477506,0.356497378384721,0,0,0,1.70219802876894,0.720244376125241,0.517434735131018,0.428674070063185,0.354680467284547,0.535106452806212,0.658196082408484,0.913394847343798,0,0,0.220528398054962,0,0,0,0,0,0,2.59595422814714,0,0,0.185194527369712,0,0,0,0,0.139951452323658,0.138199973804424,0,0.158167996790568,0,0,0,0,0,0,0,0,0,0,0,0.165458490457098,0.194451188344048,0.129159823477731,0.168956125490778,0,0,0,0,0,0,0,0,0,0,0.198681354781265,0,0,0,0,0,0,0.0962118416403295,0,0,0,0,0,0,0.187682475451182,0,0,0,1.6942555278512,4.14292712856459,1.71868654031819,1.89038500578056,2.05524755931193,1.5107877947794,2.70009000092722,2.2516060161211,2.26571204492102,2.5888015587591,0,0.399024873401031,0.170733605754134,0,0,0.183843508450014,0,0,0,0.252697211763798,0.760437899670719,0,0.37456602987953,0.128050304809739,0.402048282689293,0,0.231768651889711,0.192909220463705,0,0.441596760403192,0,0.177475806159338,0.238436189947321,0,0.376437521661322,0.169229215783353,0,0,0.135804113845862,0,0,0.394017929502254,0.409231043169689,0,0.192906610981141,1.24905288968973,0.233931608445408,0.429742108096597,0,0,0|short_description=p5@Clstn3}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:232370 | |||
|HGNC= | |||
|MCL_coexpression_id=1 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:Q99JH7 | |||
|association_with_transcript=0bp_to_NM_153508,uc009dqw.2_5end | |||
|cluster_id=chr6:124414790..124414801,- | |||
|description=CAGE_peak_5_at_Clstn3_5end | |||
|id=chr6:124414790..124414801,- | |||
|ontology_enrichment_celltype=CL:0000117!1.10e-14!23;CL:0000337!1.10e-14!23;CL:0000540!1.21e-10!33;CL:0000047!1.21e-10!33;CL:0000031!1.21e-10!33;CL:0000404!1.21e-10!33;CL:0000393!1.15e-07!39;CL:0000211!1.15e-07!39 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,3.23e-18,23;CL:0000337,3.23e-18,23;CL:0000540,1.08e-11,33;CL:0000047,1.08e-11,33;CL:0000031,1.08e-11,33;CL:0000404,1.08e-11,33;CL:0000393,2.13e-09,39;CL:0000211,2.13e-09,39;CL:0002614,5.92e-09,3;CL:0002610,1.12e-08,3;CL:0002319,3.13e-08,43;CL:0000221,5.68e-08,44;CL:0000133,5.68e-08,44;CL:0002612,1.07e-07,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!2.07e-31!52;UBERON:0005068!2.07e-31!52;UBERON:0006241!2.07e-31!52;UBERON:0007135!2.07e-31!52;UBERON:0000955!1.34e-29!50;UBERON:0006238!1.34e-29!50;UBERON:0002616!7.35e-29!49;UBERON:0002346!9.11e-29!71;UBERON:0003075!9.11e-29!71;UBERON:0007284!9.11e-29!71;UBERON:0000033!1.13e-28!63;UBERON:0001017!2.08e-28!73;UBERON:0005743!2.08e-28!73;UBERON:0000073!5.01e-27!75;UBERON:0001016!5.01e-27!75;UBERON:0003080!4.12e-24!40;UBERON:0003056!1.89e-23!49;UBERON:0002780!3.38e-23!39;UBERON:0001890!3.38e-23!39;UBERON:0006240!3.38e-23!39;UBERON:0004121!1.05e-22!102;UBERON:0000924!1.05e-22!102;UBERON:0006601!1.05e-22!102;UBERON:0002020!4.03e-21!34;UBERON:0000153!8.83e-18!94;UBERON:0002791!8.23e-17!29;UBERON:0003528!8.23e-17!29;UBERON:0001893!8.23e-17!29;UBERON:0007811!8.40e-17!86;UBERON:0000956!5.71e-11!21;UBERON:0001869!5.71e-11!21;UBERON:0000203!5.71e-11!21;UBERON:0002021!3.42e-09!10;UBERON:0000411!3.42e-09!10;UBERON:0001950!3.42e-09!10;UBERON:0002619!1.11e-08!17;UBERON:0000025!4.36e-08!114;UBERON:0004111!5.57e-08!122;UBERON:0003076!1.27e-07!12;UBERON:0003057!1.27e-07!12;UBERON:0000475!1.73e-07!200;UBERON:0001894!2.73e-07!10;UBERON:0006222!2.73e-07!10;UBERON:0002420!2.97e-07!8;UBERON:0007245!2.97e-07!8;UBERON:0010009!2.97e-07!8;UBERON:0010011!2.97e-07!8;UBERON:0000454!2.97e-07!8;UBERON:0002298!4.14e-07!6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,5.71e-45,54;UBERON:0001049,2.04e-40,52;UBERON:0005068,2.04e-40,52;UBERON:0006241,2.04e-40,52;UBERON:0007135,2.04e-40,52;UBERON:0001017,5.77e-38,73;UBERON:0001016,9.33e-37,75;UBERON:0002020,1.52e-31,34;UBERON:0002346,1.58e-31,64;UBERON:0003075,1.58e-31,64;UBERON:0007284,1.58e-31,64;UBERON:0002616,5.58e-29,46;UBERON:0000955,3.12e-28,47;UBERON:0006238,3.12e-28,47;UBERON:0004121,1.85e-27,95;UBERON:0000924,1.85e-27,95;UBERON:0006601,1.85e-27,95;UBERON:0010371,8.92e-27,73;UBERON:0003080,3.36e-23,40;UBERON:0003528,5.57e-22,29;UBERON:0002791,5.57e-22,29;UBERON:0001893,5.57e-22,29;UBERON:0002780,1.83e-21,39;UBERON:0001890,1.83e-21,39;UBERON:0006240,1.83e-21,39;UBERON:0002021,4.11e-21,10;UBERON:0000411,4.11e-21,10;UBERON:0001950,4.11e-21,10;UBERON:0010314,8.65e-20,92;UBERON:0003076,7.86e-19,12;UBERON:0003057,7.86e-19,12;UBERON:0003056,5.61e-18,49;UBERON:0002619,1.68e-16,17;UBERON:0000956,1.78e-15,21;UBERON:0001869,1.78e-15,21;UBERON:0000203,1.78e-15,21;UBERON:0000025,1.33e-14,114;UBERON:0002240,3.32e-14,6;UBERON:0005174,3.32e-14,6;UBERON:0001137,3.32e-14,6;UBERON:0004111,3.52e-13,122;UBERON:0001948,3.96e-12,5;UBERON:0002315,3.96e-12,5;UBERON:0002950,4.10e-11,4;UBERON:0001891,4.10e-11,4;UBERON:0009616,4.10e-11,4;UBERON:0010286,4.10e-11,4;UBERON:0011216,1.48e-09,194;UBERON:0002038,5.92e-09,3;UBERON:0009663,5.92e-09,3;UBERON:0009661,5.92e-09,3;UBERON:0000125,5.92e-09,3;UBERON:0002308,5.92e-09,3;UBERON:0004684,1.12e-08,3;UBERON:0002275,1.12e-08,3;UBERON:0002257,1.07e-07,3;UBERON:0002420,1.17e-07,8;UBERON:0007245,1.17e-07,8;UBERON:0010009,1.17e-07,8;UBERON:0010011,1.17e-07,8;UBERON:0000454,1.17e-07,8;UBERON:0000483,4.03e-07,174;UBERON:0000119,5.83e-07,176;UBERON:0004733,6.93e-07,6;UBERON:0004732,6.93e-07,6;UBERON:0002028,6.93e-07,6;UBERON:0007277,6.93e-07,6 | |||
|phase1_expression=0.640595388419176,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.21389876515759,0,1.26766280701236,0,0,0,0,0,0,0,0.311068836925433,0.540023753326763,0.630974884054146,3.71346279724945,3.09215957332259,0.979926393719632,0.766763768145891,0,3.30347642998166,4.72443150915195,6.60508093001847,0.395658863190582,2.37867873366265,0.52091337055676,6.42120897703176,5.06486349028512,6.87592114995646,2.65165726926301,2.98980529678116,1.86399445825301,0,0,0,0,0,0,0,0,0,0,0,0,0.422530259330042,0,0,0,0,0,0,0.11418387971906,0,0,0.173485326766136,0,0.230615497256059,0.452167921657868,0,0.125666591329675,0,0,0,0.485300549842228,0,0,0,1.75668478206928,3.77004072264219,0,0.11981512450592,0,0,2.99581278809645,0.915001205637253,1.13088916901578,3.82413504423008,2.55715457330331,2.0778804455956,2.59586020908412,0.101839363850316,0.124406970610093,0,0.631325567659422,0.130120442962704,0.689706313300419,0,0.452114453507145,0.0680364991513279,0,0.0937017245597288,0,0,0.378212160335639,0.527853372491847,0.43839146485515,0,0.348252166522167,0.205782136407943,0,0,0,0,0,0.234526059981096,0,0,0,0,0,0,0,0,0,0,0,0,0,1.05144974282064,1.13195073617213,0,0,0.213288250535234,0.232236671860439,0,0,0,0,0,0.164698954724011,0,0,0,0,0,0.199141273254367,0,0.114248512609729,0,0,0,0.140271639780637,0,0,0,0.123397163921801,0,0,0,0.224862112384854,0,0,0,0.287696137450811,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167506257441816,0,0,0,0,0,0,0,0.144649058581512,0,0,0,0,4.0137647496948,4.21962071731931,0,0,0,0,0.215423397732799,0,0,0,0,0.584511715822624,0,0.963963949265421,0,0,0,0.164970122972535,0,0,0,0.377210159511796,0,0.307435147943927,0.258428293168221,0.363533729477506,0.356497378384721,0,0,0,1.70219802876894,0.720244376125241,0.517434735131018,0.428674070063185,0.354680467284547,0.535106452806212,0.658196082408484,0.913394847343798,0,0,0.220528398054962,0,0,0,0,0,0,2.59595422814714,0,0,0.185194527369712,0,0,0,0,0.139951452323658,0.138199973804424,0,0.158167996790568,0,0,0,0,0,0,0,0,0,0,0,0.165458490457098,0.194451188344048,0.129159823477731,0.168956125490778,0,0,0,0,0,0,0,0,0,0,0.198681354781265,0,0,0,0,0,0,0.0962118416403295,0,0,0,0,0,0,0.187682475451182,0,0,0,1.6942555278512,4.14292712856459,1.71868654031819,1.89038500578056,2.05524755931193,1.5107877947794,2.70009000092722,2.2516060161211,2.26571204492102,2.5888015587591,0,0.399024873401031,0.170733605754134,0,0,0.183843508450014,0,0,0,0.252697211763798,0.760437899670719,0,0.37456602987953,0.128050304809739,0.402048282689293,0,0.231768651889711,0.192909220463705,0,0.441596760403192,0,0.177475806159338,0.238436189947321,0,0.376437521661322,0.169229215783353,0,0,0.135804113845862,0,0,0.394017929502254,0.409231043169689,0,0.192906610981141,1.24905288968973,0.233931608445408,0.429742108096597,0,0,0 | |||
|short_description=p5@Clstn3 | |||
}} |
Revision as of 02:54, 5 August 2015
Short description: | p5@Clstn3 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_Clstn3_5end |
Coexpression cluster: | MCL_coexpression_mm9:1 |
Association with transcript: | 0bp_to_NM_153508, uc009dqw.2_5end |
EntrezGene: | 232370 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 3.23e-18 | 23 |
neuroblast (sensu Vertebrata) | 3.23e-18 | 23 |
neuron | 1.08e-11 | 33 |
neuronal stem cell | 1.08e-11 | 33 |
neuroblast | 1.08e-11 | 33 |
electrically signaling cell | 1.08e-11 | 33 |
electrically responsive cell | 2.13e-09 | 39 |
electrically active cell | 2.13e-09 | 39 |
neuron of the substantia nigra | 5.92e-09 | 3 |
raphe nuclei neuron | 1.12e-08 | 3 |
neural cell | 3.13e-08 | 43 |
ectodermal cell | 5.68e-08 | 44 |
neurectodermal cell | 5.68e-08 | 44 |
neuron of the ventral spinal cord | 1.07e-07 | 3 |