FFCP PHASE1:Mm9::chr17:91492358..91492369,-: Difference between revisions
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{{FFCP|EntrezGene=18189|HGNC=|MCL_coexpression_id=13|UniProt=Q9CS84|association_with_transcript=-21bp_to_ENSMUST00000160844_5end|description=CAGE_peak_14_at_Nrxn1_5end|id=chr17:91492358..91492369,-|ontology_enrichment_celltype=CL:0000117!2.81e-19!23;CL:0000337!2.81e-19!23;CL:0000540!2.60e-12!33;CL:0000047!2.60e-12!33;CL:0000031!2.60e-12!33;CL:0000404!2.60e-12!33;CL:0002319!5.21e-10!43;CL:0000221!1.33e-09!44;CL:0000133!1.33e-09!44;CL:0000393!2.77e-09!39;CL:0000211!2.77e-09!39;CL:0000055!1.53e-07!50|ontology_enrichment_celltype_v019_2=CL:0000117,3.35e-23,23;CL:0000337,3.35e-23,23;CL:0000540,2.96e-15,33;CL:0000047,2.96e-15,33;CL:0000031,2.96e-15,33;CL:0000404,2.96e-15,33;CL:0000393,1.90e-12,39;CL:0000211,1.90e-12,39;CL:0002319,5.18e-11,43;CL:0000221,1.08e-10,44;CL:0000133,1.08e-10,44;CL:0002612,1.24e-10,3;CL:0002610,3.56e-10,3;CL:0000120,8.68e-10,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001049!1.97e-30!52;UBERON:0005068!1.97e-30!52;UBERON:0006241!1.97e-30!52;UBERON:0007135!1.97e-30!52;UBERON:0000073!3.39e-30!75;UBERON:0001016!3.39e-30!75;UBERON:0001017!3.04e-29!73;UBERON:0005743!3.04e-29!73;UBERON:0000955!8.98e-29!50;UBERON:0006238!8.98e-29!50;UBERON:0002616!1.08e-27!49;UBERON:0002346!5.79e-27!71;UBERON:0003075!5.79e-27!71;UBERON:0007284!5.79e-27!71;UBERON:0004121!7.35e-25!102;UBERON:0000924!7.35e-25!102;UBERON:0006601!7.35e-25!102;UBERON:0002020!1.26e-24!34;UBERON:0000033!1.68e-24!63;UBERON:0003080!3.05e-21!40;UBERON:0002780!3.32e-20!39;UBERON:0001890!3.32e-20!39;UBERON:0006240!3.32e-20!39;UBERON:0003056!7.63e-20!49;UBERON:0002791!1.44e-19!29;UBERON:0003528!1.44e-19!29;UBERON:0001893!1.44e-19!29;UBERON:0007811!5.66e-14!86;UBERON:0000956!4.90e-12!21;UBERON:0001869!4.90e-12!21;UBERON:0000203!4.90e-12!21;UBERON:0000153!1.34e-11!94;UBERON:0002021!1.75e-10!10;UBERON:0000411!1.75e-10!10;UBERON:0001950!1.75e-10!10;UBERON:0002619!2.33e-10!17;UBERON:0003076!1.31e-09!12;UBERON:0003057!1.31e-09!12;UBERON:0002420!4.15e-09!8;UBERON:0007245!4.15e-09!8;UBERON:0010009!4.15e-09!8;UBERON:0010011!4.15e-09!8;UBERON:0000454!4.15e-09!8;UBERON:0002240!2.63e-07!6;UBERON:0005174!2.63e-07!6;UBERON:0001137!2.63e-07!6;UBERON:0002298!9.66e-07!6|ontology_enrichment_uberon_v019_2=UBERON:0001017,4.49e-29,73;UBERON:0001016,3.72e-28,75;UBERON:0000073,6.53e-27,54;UBERON:0001049,9.99e-23,52;UBERON:0005068,9.99e-23,52;UBERON:0006241,9.99e-23,52;UBERON:0007135,9.99e-23,52;UBERON:0002020,1.56e-21,34;UBERON:0004121,4.28e-21,95;UBERON:0000924,4.28e-21,95;UBERON:0006601,4.28e-21,95;UBERON:0000955,4.36e-18,47;UBERON:0006238,4.36e-18,47;UBERON:0002346,1.34e-17,64;UBERON:0003075,1.34e-17,64;UBERON:0007284,1.34e-17,64;UBERON:0003080,3.62e-17,40;UBERON:0003528,1.49e-16,29;UBERON:0002791,1.49e-16,29;UBERON:0001893,1.49e-16,29;UBERON:0002616,2.02e-16,46;UBERON:0002780,1.99e-15,39;UBERON:0001890,1.99e-15,39;UBERON:0006240,1.99e-15,39;UBERON:0010371,7.33e-15,73;UBERON:0003056,2.36e-13,49;UBERON:0010314,7.74e-11,92;UBERON:0002257,1.24e-10,3;UBERON:0004684,3.56e-10,3;UBERON:0002275,3.56e-10,3;UBERON:0002021,4.71e-10,10;UBERON:0000411,4.71e-10,10;UBERON:0001950,4.71e-10,10;UBERON:0000956,1.64e-09,21;UBERON:0001869,1.64e-09,21;UBERON:0000203,1.64e-09,21;UBERON:0002420,5.87e-09,8;UBERON:0007245,5.87e-09,8;UBERON:0010009,5.87e-09,8;UBERON:0010011,5.87e-09,8;UBERON:0000454,5.87e-09,8;UBERON:0002240,1.24e-08,6;UBERON:0005174,1.24e-08,6;UBERON:0001137,1.24e-08,6;UBERON:0000025,7.36e-08,114;UBERON:0002619,1.75e-07,17;UBERON:0011216,1.80e-07,194;UBERON:0004111,4.80e-07,122;UBERON:0002950,6.97e-07,4;UBERON:0001891,6.97e-07,4;UBERON:0009616,6.97e-07,4;UBERON:0010286,6.97e-07,4|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218025156380447,0,0,0,0,0,0,0,0,0,0,1.21389876515759,2.64495489636016,2.53532561402472,0,0,0,0,0,0,0,0.829516898467821,1.08004750665353,0,0.856952953211411,0.441737081903227,0.734944795289724,0.575072826109418,0,2.20231761998777,2.17068474744819,2.61131106535614,0.923204014111357,2.28719109006024,1.56274011167028,1.3959149950069,1.12552522006336,0.916789486660861,3.53554302568401,4.55589378557129,2.60959224155421,0.151452386666368,0.0755715601067855,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.148442139064825,0.173485326766136,0.304465478312141,0.230615497256059,0,0,0,0,0,0,0,0,0,0,0.585561594023094,1.46612694769419,0,0,0,0,1.79748767285787,0.915001205637253,2.1361239859187,1.39059456153821,1.53429274398198,0.41557608911912,1.78465389374533,0,0,0,0,0,0,0,0.150704817835715,0.272145996605311,0.2562274405697,0.562210347358373,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.841159794256509,1.23485534855141,0,0,0,0,0,0.201683524623343,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.963303539926752,0.468846746368813,0,0,0,0,0,0,0.445597348164788,0,0,0,0,1.60660658210904,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.02131881726136,0,0,0,0.354680467284547,0.178368817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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:18189 | |||
|HGNC= | |||
|MCL_coexpression_id=13 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:Q9CS84 | |||
|association_with_transcript=-21bp_to_ENSMUST00000160844_5end | |||
|cluster_id=chr17:91492358..91492369,- | |||
|description=CAGE_peak_14_at_Nrxn1_5end | |||
|id=chr17:91492358..91492369,- | |||
|ontology_enrichment_celltype=CL:0000117!2.81e-19!23;CL:0000337!2.81e-19!23;CL:0000540!2.60e-12!33;CL:0000047!2.60e-12!33;CL:0000031!2.60e-12!33;CL:0000404!2.60e-12!33;CL:0002319!5.21e-10!43;CL:0000221!1.33e-09!44;CL:0000133!1.33e-09!44;CL:0000393!2.77e-09!39;CL:0000211!2.77e-09!39;CL:0000055!1.53e-07!50 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,3.35e-23,23;CL:0000337,3.35e-23,23;CL:0000540,2.96e-15,33;CL:0000047,2.96e-15,33;CL:0000031,2.96e-15,33;CL:0000404,2.96e-15,33;CL:0000393,1.90e-12,39;CL:0000211,1.90e-12,39;CL:0002319,5.18e-11,43;CL:0000221,1.08e-10,44;CL:0000133,1.08e-10,44;CL:0002612,1.24e-10,3;CL:0002610,3.56e-10,3;CL:0000120,8.68e-10,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!1.97e-30!52;UBERON:0005068!1.97e-30!52;UBERON:0006241!1.97e-30!52;UBERON:0007135!1.97e-30!52;UBERON:0000073!3.39e-30!75;UBERON:0001016!3.39e-30!75;UBERON:0001017!3.04e-29!73;UBERON:0005743!3.04e-29!73;UBERON:0000955!8.98e-29!50;UBERON:0006238!8.98e-29!50;UBERON:0002616!1.08e-27!49;UBERON:0002346!5.79e-27!71;UBERON:0003075!5.79e-27!71;UBERON:0007284!5.79e-27!71;UBERON:0004121!7.35e-25!102;UBERON:0000924!7.35e-25!102;UBERON:0006601!7.35e-25!102;UBERON:0002020!1.26e-24!34;UBERON:0000033!1.68e-24!63;UBERON:0003080!3.05e-21!40;UBERON:0002780!3.32e-20!39;UBERON:0001890!3.32e-20!39;UBERON:0006240!3.32e-20!39;UBERON:0003056!7.63e-20!49;UBERON:0002791!1.44e-19!29;UBERON:0003528!1.44e-19!29;UBERON:0001893!1.44e-19!29;UBERON:0007811!5.66e-14!86;UBERON:0000956!4.90e-12!21;UBERON:0001869!4.90e-12!21;UBERON:0000203!4.90e-12!21;UBERON:0000153!1.34e-11!94;UBERON:0002021!1.75e-10!10;UBERON:0000411!1.75e-10!10;UBERON:0001950!1.75e-10!10;UBERON:0002619!2.33e-10!17;UBERON:0003076!1.31e-09!12;UBERON:0003057!1.31e-09!12;UBERON:0002420!4.15e-09!8;UBERON:0007245!4.15e-09!8;UBERON:0010009!4.15e-09!8;UBERON:0010011!4.15e-09!8;UBERON:0000454!4.15e-09!8;UBERON:0002240!2.63e-07!6;UBERON:0005174!2.63e-07!6;UBERON:0001137!2.63e-07!6;UBERON:0002298!9.66e-07!6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,4.49e-29,73;UBERON:0001016,3.72e-28,75;UBERON:0000073,6.53e-27,54;UBERON:0001049,9.99e-23,52;UBERON:0005068,9.99e-23,52;UBERON:0006241,9.99e-23,52;UBERON:0007135,9.99e-23,52;UBERON:0002020,1.56e-21,34;UBERON:0004121,4.28e-21,95;UBERON:0000924,4.28e-21,95;UBERON:0006601,4.28e-21,95;UBERON:0000955,4.36e-18,47;UBERON:0006238,4.36e-18,47;UBERON:0002346,1.34e-17,64;UBERON:0003075,1.34e-17,64;UBERON:0007284,1.34e-17,64;UBERON:0003080,3.62e-17,40;UBERON:0003528,1.49e-16,29;UBERON:0002791,1.49e-16,29;UBERON:0001893,1.49e-16,29;UBERON:0002616,2.02e-16,46;UBERON:0002780,1.99e-15,39;UBERON:0001890,1.99e-15,39;UBERON:0006240,1.99e-15,39;UBERON:0010371,7.33e-15,73;UBERON:0003056,2.36e-13,49;UBERON:0010314,7.74e-11,92;UBERON:0002257,1.24e-10,3;UBERON:0004684,3.56e-10,3;UBERON:0002275,3.56e-10,3;UBERON:0002021,4.71e-10,10;UBERON:0000411,4.71e-10,10;UBERON:0001950,4.71e-10,10;UBERON:0000956,1.64e-09,21;UBERON:0001869,1.64e-09,21;UBERON:0000203,1.64e-09,21;UBERON:0002420,5.87e-09,8;UBERON:0007245,5.87e-09,8;UBERON:0010009,5.87e-09,8;UBERON:0010011,5.87e-09,8;UBERON:0000454,5.87e-09,8;UBERON:0002240,1.24e-08,6;UBERON:0005174,1.24e-08,6;UBERON:0001137,1.24e-08,6;UBERON:0000025,7.36e-08,114;UBERON:0002619,1.75e-07,17;UBERON:0011216,1.80e-07,194;UBERON:0004111,4.80e-07,122;UBERON:0002950,6.97e-07,4;UBERON:0001891,6.97e-07,4;UBERON:0009616,6.97e-07,4;UBERON:0010286,6.97e-07,4 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218025156380447,0,0,0,0,0,0,0,0,0,0,1.21389876515759,2.64495489636016,2.53532561402472,0,0,0,0,0,0,0,0.829516898467821,1.08004750665353,0,0.856952953211411,0.441737081903227,0.734944795289724,0.575072826109418,0,2.20231761998777,2.17068474744819,2.61131106535614,0.923204014111357,2.28719109006024,1.56274011167028,1.3959149950069,1.12552522006336,0.916789486660861,3.53554302568401,4.55589378557129,2.60959224155421,0.151452386666368,0.0755715601067855,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.148442139064825,0.173485326766136,0.304465478312141,0.230615497256059,0,0,0,0,0,0,0,0,0,0,0.585561594023094,1.46612694769419,0,0,0,0,1.79748767285787,0.915001205637253,2.1361239859187,1.39059456153821,1.53429274398198,0.41557608911912,1.78465389374533,0,0,0,0,0,0,0,0.150704817835715,0.272145996605311,0.2562274405697,0.562210347358373,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.841159794256509,1.23485534855141,0,0,0,0,0,0.201683524623343,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.963303539926752,0.468846746368813,0,0,0,0,0,0,0.445597348164788,0,0,0,0,1.60660658210904,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.02131881726136,0,0,0,0.354680467284547,0.178368817602071,0,0.304464949114599,0,0,0,0,0,0,0,0,0,1.29797711407357,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.564751842617067,1.38097570952153,1.71868654031819,2.40594455281163,0.685082519770642,0.755393897389701,2.02506750069542,1.35096360967266,0.906284817968409,1.55328093525546,0,0,0.170733605754134,0.729320151204882,0.419226325255965,0.367687016900028,0.888986911206461,0.412070114477788,0.320919209591815,0.758091635291392,0.25347929989024,0.188626341386076,0.187283014939765,0.448176066834085,0.114870937911227,0.476293691283074,0.811190281613988,0.192909220463705,0.824171801606613,0.147198920134397,0.342869252385415,0.177475806159338,0.476872379894642,0.872078499793971,0.188218760830661,0.25384382367503,0,1.05227884575137,0.407412341537585,0,0,0.197008964751127,0.818462086339379,0.309873682371932,0.578719832943424,0,0.233931608445408,0.214871054048298,0,0,0 | |||
|short_description=p14@Nrxn1 | |||
}} |
Revision as of 12:11, 5 August 2015
Short description: | p14@Nrxn1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_14_at_Nrxn1_5end |
Coexpression cluster: | MCL_coexpression_mm9:13 |
Association with transcript: | -21bp_to_ENSMUST00000160844_5end |
EntrezGene: | 18189 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 3.35e-23 | 23 |
neuroblast (sensu Vertebrata) | 3.35e-23 | 23 |
neuron | 2.96e-15 | 33 |
neuronal stem cell | 2.96e-15 | 33 |
neuroblast | 2.96e-15 | 33 |
electrically signaling cell | 2.96e-15 | 33 |
electrically responsive cell | 1.90e-12 | 39 |
electrically active cell | 1.90e-12 | 39 |
neural cell | 5.18e-11 | 43 |
ectodermal cell | 1.08e-10 | 44 |
neurectodermal cell | 1.08e-10 | 44 |
neuron of the ventral spinal cord | 1.24e-10 | 3 |
raphe nuclei neuron | 3.56e-10 | 3 |
granule cell | 8.68e-10 | 3 |