FFCP PHASE1:Mm9::chr18:25912083..25912101,-: Difference between revisions
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{{FFCP|EntrezGene=108013|HGNC=|MCL_coexpression_id=13|UniProt=|association_with_transcript=382bp_to_ENSMUST00000078609_5end|description=CAGE_peak_5_at_Celf4_5end|id=chr18:25912083..25912101,-|ontology_enrichment_celltype=CL:0000117!2.62e-20!23;CL:0000337!2.62e-20!23;CL:0000540!1.55e-18!33;CL:0000047!1.55e-18!33;CL:0000031!1.55e-18!33;CL:0000404!1.55e-18!33;CL:0000393!4.64e-14!39;CL:0000211!4.64e-14!39;CL:0002319!1.40e-12!43;CL:0000221!4.60e-12!44;CL:0000133!4.60e-12!44;CL:0000055!1.93e-09!50|ontology_enrichment_celltype_v019_2=CL:0000117,1.78e-23,23;CL:0000337,1.78e-23,23;CL:0000540,7.35e-15,33;CL:0000047,7.35e-15,33;CL:0000031,7.35e-15,33;CL:0000404,7.35e-15,33;CL:0000393,7.78e-12,39;CL:0000211,7.78e-12,39;CL:0002319,2.68e-10,43;CL:0000221,5.85e-10,44;CL:0000133,5.85e-10,44;CL:0002613,2.32e-07,3;CL:0000120,2.92e-07,3;CL:0002610,7.16e-07,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!8.27e-32!73;UBERON:0005743!8.27e-32!73;UBERON:0000073!2.09e-31!75;UBERON:0001016!2.09e-31!75;UBERON:0001049!1.01e-27!52;UBERON:0005068!1.01e-27!52;UBERON:0006241!1.01e-27!52;UBERON:0007135!1.01e-27!52;UBERON:0000955!1.81e-26!50;UBERON:0006238!1.81e-26!50;UBERON:0002020!1.30e-25!34;UBERON:0002616!1.40e-25!49;UBERON:0002346!3.69e-24!71;UBERON:0003075!3.69e-24!71;UBERON:0007284!3.69e-24!71;UBERON:0000033!3.89e-23!63;UBERON:0004121!4.35e-22!102;UBERON:0000924!4.35e-22!102;UBERON:0006601!4.35e-22!102;UBERON:0003080!1.27e-21!40;UBERON:0002791!3.07e-21!29;UBERON:0003528!3.07e-21!29;UBERON:0001893!3.07e-21!29;UBERON:0003056!6.66e-21!49;UBERON:0002780!1.10e-20!39;UBERON:0001890!1.10e-20!39;UBERON:0006240!1.10e-20!39;UBERON:0000956!3.63e-14!21;UBERON:0001869!3.63e-14!21;UBERON:0000203!3.63e-14!21;UBERON:0007811!1.35e-12!86;UBERON:0002619!1.15e-11!17;UBERON:0000153!2.98e-10!94;UBERON:0002021!3.74e-10!10;UBERON:0000411!3.74e-10!10;UBERON:0001950!3.74e-10!10;UBERON:0002420!2.43e-08!8;UBERON:0007245!2.43e-08!8;UBERON:0010009!2.43e-08!8;UBERON:0010011!2.43e-08!8;UBERON:0000454!2.43e-08!8|ontology_enrichment_uberon_v019_2=UBERON:0000073,9.52e-40,54;UBERON:0001017,3.76e-37,73;UBERON:0001049,6.75e-36,52;UBERON:0005068,6.75e-36,52;UBERON:0006241,6.75e-36,52;UBERON:0007135,6.75e-36,52;UBERON:0001016,6.88e-36,75;UBERON:0002020,2.07e-34,34;UBERON:0000955,7.86e-29,47;UBERON:0006238,7.86e-29,47;UBERON:0002346,1.80e-27,64;UBERON:0003075,1.80e-27,64;UBERON:0007284,1.80e-27,64;UBERON:0002616,2.01e-27,46;UBERON:0003528,7.81e-27,29;UBERON:0002791,7.81e-27,29;UBERON:0001893,7.81e-27,29;UBERON:0004121,3.47e-26,95;UBERON:0000924,3.47e-26,95;UBERON:0006601,3.47e-26,95;UBERON:0003080,5.30e-26,40;UBERON:0002780,1.77e-24,39;UBERON:0001890,1.77e-24,39;UBERON:0006240,1.77e-24,39;UBERON:0010371,5.67e-23,73;UBERON:0003056,6.40e-20,49;UBERON:0002619,2.05e-18,17;UBERON:0002021,3.06e-17,10;UBERON:0000411,3.06e-17,10;UBERON:0001950,3.06e-17,10;UBERON:0000956,9.80e-17,21;UBERON:0001869,9.80e-17,21;UBERON:0000203,9.80e-17,21;UBERON:0010314,2.20e-16,92;UBERON:0000025,1.57e-11,114;UBERON:0002420,1.67e-11,8;UBERON:0007245,1.67e-11,8;UBERON:0010009,1.67e-11,8;UBERON:0010011,1.67e-11,8;UBERON:0000454,1.67e-11,8;UBERON:0000369,1.28e-10,5;UBERON:0002435,1.28e-10,5;UBERON:0000204,1.28e-10,5;UBERON:0010082,1.28e-10,5;UBERON:0004111,3.29e-10,122;UBERON:0002240,4.58e-10,6;UBERON:0005174,4.58e-10,6;UBERON:0001137,4.58e-10,6;UBERON:0003076,5.43e-10,12;UBERON:0003057,5.43e-10,12;UBERON:0001948,7.20e-09,5;UBERON:0002315,7.20e-09,5;UBERON:0011216,1.25e-07,194;UBERON:0004684,7.16e-07,3;UBERON:0002275,7.16e-07,3|phase1_expression=0,0,0,0,0,0,0,0.129123323441576,0,0,0,0,0,0,0,0,0,0,0,0,0.935476191661768,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.85559506063035,5.81890077199236,7.60597684207415,0,0,0,0,0,0,0,0.933206510776299,0.405017814995072,0.841299845405528,1.71390590642282,2.65042249141936,0.979926393719632,2.01275489138296,2.75765635983006,6.60695285996332,3.31987079021488,4.14737639791857,7.25374582516066,6.58711033937349,6.25096044668112,2.23346399201105,0.56276261003168,2.59757021220577,2.35702868378934,2.98980529678116,3.72798891650601,0,0.0755715601067855,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.17112318804619,0.209446706813455,0,0,0,0,3.44518470631092,3.66000482254901,3.26701315493447,4.86708096538374,5.62574006126727,4.1557608911912,3.24482526135515,0.101839363850316,0,0,0,0,0,0,0.452114453507145,0.612328492361951,0.640568601424249,0.655912071918102,0.258703370739016,0,0,0,0,0,0,0,0,0,0,0,0,0.234526059981096,0,0,0,0,0,0,0,0,0,0,0,0,0,2.94405927989778,3.08713837137853,0,0,0,0,0,0,0,0,0,0,0,0.198956472041151,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.56880943980467,1.99259867206745,0,0,0.631016438832513,0.390438744296638,0.861693590931196,0,0,0.283076530788832,0,0.292255857911312,0.395287777946524,2.89189184779626,0,0,0.488660878060728,0,0,0,0.302323556964751,0,0,0,0,0,0,0,0,0,1.02131881726136,0.18006109403131,0,0,0.177340233642274,0.178368817602071,0,0,0,0,0,0,0,0,0,0,0,1.48340241608408,0,0,0,0,0,0,0,0,0,0,0,0,0,0.209088296014469,0,0,0,0,0,0,0.56369293868419,0,0,0,0,0,0,0,0,0,0.288030006257865,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.187682475451182,0,0,0,3.3885110557024,3.68260189205742,3.43737308063638,3.26521046453006,2.74033007908257,1.5107877947794,3.37511250115903,3.60256962579376,4.53142408984205,2.07104124700728,0,0,0.341467211508268,0.972426868273176,1.88651846365184,0,0,0.618105171716683,0.320919209591815,0.758091635291392,1.52087579934144,0,0.749132059759059,0.576226371643824,0.804096565378586,1.42888107384922,1.0429589335037,1.15745532278223,0.824171801606613,0.147198920134397,0,0.70990322463735,0.238436189947321,0.436039249896986,0.658765662907314,0.761531471025089,0.914639864363863,0.526139422875686,0.950628796921032,0.561142271657738,1.18635018124174,1.37906275325789,0.818462086339379,0.154936841185966,0.192906610981141,1.49886346762768,0.467863216890817,0.859484216193193,0.191288332068843,0.220591419119515,0|short_description=p5@Celf4}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:108013 | |||
|HGNC= | |||
|MCL_coexpression_id=13 | |||
|TSSclassifier=NA | |||
|UniProt= | |||
|association_with_transcript=382bp_to_ENSMUST00000078609_5end | |||
|cluster_id=chr18:25912083..25912101,- | |||
|description=CAGE_peak_5_at_Celf4_5end | |||
|id=chr18:25912083..25912101,- | |||
|ontology_enrichment_celltype=CL:0000117!2.62e-20!23;CL:0000337!2.62e-20!23;CL:0000540!1.55e-18!33;CL:0000047!1.55e-18!33;CL:0000031!1.55e-18!33;CL:0000404!1.55e-18!33;CL:0000393!4.64e-14!39;CL:0000211!4.64e-14!39;CL:0002319!1.40e-12!43;CL:0000221!4.60e-12!44;CL:0000133!4.60e-12!44;CL:0000055!1.93e-09!50 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,1.78e-23,23;CL:0000337,1.78e-23,23;CL:0000540,7.35e-15,33;CL:0000047,7.35e-15,33;CL:0000031,7.35e-15,33;CL:0000404,7.35e-15,33;CL:0000393,7.78e-12,39;CL:0000211,7.78e-12,39;CL:0002319,2.68e-10,43;CL:0000221,5.85e-10,44;CL:0000133,5.85e-10,44;CL:0002613,2.32e-07,3;CL:0000120,2.92e-07,3;CL:0002610,7.16e-07,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!8.27e-32!73;UBERON:0005743!8.27e-32!73;UBERON:0000073!2.09e-31!75;UBERON:0001016!2.09e-31!75;UBERON:0001049!1.01e-27!52;UBERON:0005068!1.01e-27!52;UBERON:0006241!1.01e-27!52;UBERON:0007135!1.01e-27!52;UBERON:0000955!1.81e-26!50;UBERON:0006238!1.81e-26!50;UBERON:0002020!1.30e-25!34;UBERON:0002616!1.40e-25!49;UBERON:0002346!3.69e-24!71;UBERON:0003075!3.69e-24!71;UBERON:0007284!3.69e-24!71;UBERON:0000033!3.89e-23!63;UBERON:0004121!4.35e-22!102;UBERON:0000924!4.35e-22!102;UBERON:0006601!4.35e-22!102;UBERON:0003080!1.27e-21!40;UBERON:0002791!3.07e-21!29;UBERON:0003528!3.07e-21!29;UBERON:0001893!3.07e-21!29;UBERON:0003056!6.66e-21!49;UBERON:0002780!1.10e-20!39;UBERON:0001890!1.10e-20!39;UBERON:0006240!1.10e-20!39;UBERON:0000956!3.63e-14!21;UBERON:0001869!3.63e-14!21;UBERON:0000203!3.63e-14!21;UBERON:0007811!1.35e-12!86;UBERON:0002619!1.15e-11!17;UBERON:0000153!2.98e-10!94;UBERON:0002021!3.74e-10!10;UBERON:0000411!3.74e-10!10;UBERON:0001950!3.74e-10!10;UBERON:0002420!2.43e-08!8;UBERON:0007245!2.43e-08!8;UBERON:0010009!2.43e-08!8;UBERON:0010011!2.43e-08!8;UBERON:0000454!2.43e-08!8 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,9.52e-40,54;UBERON:0001017,3.76e-37,73;UBERON:0001049,6.75e-36,52;UBERON:0005068,6.75e-36,52;UBERON:0006241,6.75e-36,52;UBERON:0007135,6.75e-36,52;UBERON:0001016,6.88e-36,75;UBERON:0002020,2.07e-34,34;UBERON:0000955,7.86e-29,47;UBERON:0006238,7.86e-29,47;UBERON:0002346,1.80e-27,64;UBERON:0003075,1.80e-27,64;UBERON:0007284,1.80e-27,64;UBERON:0002616,2.01e-27,46;UBERON:0003528,7.81e-27,29;UBERON:0002791,7.81e-27,29;UBERON:0001893,7.81e-27,29;UBERON:0004121,3.47e-26,95;UBERON:0000924,3.47e-26,95;UBERON:0006601,3.47e-26,95;UBERON:0003080,5.30e-26,40;UBERON:0002780,1.77e-24,39;UBERON:0001890,1.77e-24,39;UBERON:0006240,1.77e-24,39;UBERON:0010371,5.67e-23,73;UBERON:0003056,6.40e-20,49;UBERON:0002619,2.05e-18,17;UBERON:0002021,3.06e-17,10;UBERON:0000411,3.06e-17,10;UBERON:0001950,3.06e-17,10;UBERON:0000956,9.80e-17,21;UBERON:0001869,9.80e-17,21;UBERON:0000203,9.80e-17,21;UBERON:0010314,2.20e-16,92;UBERON:0000025,1.57e-11,114;UBERON:0002420,1.67e-11,8;UBERON:0007245,1.67e-11,8;UBERON:0010009,1.67e-11,8;UBERON:0010011,1.67e-11,8;UBERON:0000454,1.67e-11,8;UBERON:0000369,1.28e-10,5;UBERON:0002435,1.28e-10,5;UBERON:0000204,1.28e-10,5;UBERON:0010082,1.28e-10,5;UBERON:0004111,3.29e-10,122;UBERON:0002240,4.58e-10,6;UBERON:0005174,4.58e-10,6;UBERON:0001137,4.58e-10,6;UBERON:0003076,5.43e-10,12;UBERON:0003057,5.43e-10,12;UBERON:0001948,7.20e-09,5;UBERON:0002315,7.20e-09,5;UBERON:0011216,1.25e-07,194;UBERON:0004684,7.16e-07,3;UBERON:0002275,7.16e-07,3 | |||
|phase1_expression=0,0,0,0,0,0,0,0.129123323441576,0,0,0,0,0,0,0,0,0,0,0,0,0.935476191661768,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.85559506063035,5.81890077199236,7.60597684207415,0,0,0,0,0,0,0,0.933206510776299,0.405017814995072,0.841299845405528,1.71390590642282,2.65042249141936,0.979926393719632,2.01275489138296,2.75765635983006,6.60695285996332,3.31987079021488,4.14737639791857,7.25374582516066,6.58711033937349,6.25096044668112,2.23346399201105,0.56276261003168,2.59757021220577,2.35702868378934,2.98980529678116,3.72798891650601,0,0.0755715601067855,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.17112318804619,0.209446706813455,0,0,0,0,3.44518470631092,3.66000482254901,3.26701315493447,4.86708096538374,5.62574006126727,4.1557608911912,3.24482526135515,0.101839363850316,0,0,0,0,0,0,0.452114453507145,0.612328492361951,0.640568601424249,0.655912071918102,0.258703370739016,0,0,0,0,0,0,0,0,0,0,0,0,0.234526059981096,0,0,0,0,0,0,0,0,0,0,0,0,0,2.94405927989778,3.08713837137853,0,0,0,0,0,0,0,0,0,0,0,0.198956472041151,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.56880943980467,1.99259867206745,0,0,0.631016438832513,0.390438744296638,0.861693590931196,0,0,0.283076530788832,0,0.292255857911312,0.395287777946524,2.89189184779626,0,0,0.488660878060728,0,0,0,0.302323556964751,0,0,0,0,0,0,0,0,0,1.02131881726136,0.18006109403131,0,0,0.177340233642274,0.178368817602071,0,0,0,0,0,0,0,0,0,0,0,1.48340241608408,0,0,0,0,0,0,0,0,0,0,0,0,0,0.209088296014469,0,0,0,0,0,0,0.56369293868419,0,0,0,0,0,0,0,0,0,0.288030006257865,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.187682475451182,0,0,0,3.3885110557024,3.68260189205742,3.43737308063638,3.26521046453006,2.74033007908257,1.5107877947794,3.37511250115903,3.60256962579376,4.53142408984205,2.07104124700728,0,0,0.341467211508268,0.972426868273176,1.88651846365184,0,0,0.618105171716683,0.320919209591815,0.758091635291392,1.52087579934144,0,0.749132059759059,0.576226371643824,0.804096565378586,1.42888107384922,1.0429589335037,1.15745532278223,0.824171801606613,0.147198920134397,0,0.70990322463735,0.238436189947321,0.436039249896986,0.658765662907314,0.761531471025089,0.914639864363863,0.526139422875686,0.950628796921032,0.561142271657738,1.18635018124174,1.37906275325789,0.818462086339379,0.154936841185966,0.192906610981141,1.49886346762768,0.467863216890817,0.859484216193193,0.191288332068843,0.220591419119515,0 | |||
|short_description=p5@Celf4 | |||
}} |
Revision as of 14:55, 5 August 2015
Short description: | p5@Celf4 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_Celf4_5end |
Coexpression cluster: | MCL_coexpression_mm9:13 |
Association with transcript: | 382bp_to_ENSMUST00000078609_5end |
EntrezGene: | 108013 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 1.78e-23 | 23 |
neuroblast (sensu Vertebrata) | 1.78e-23 | 23 |
neuron | 7.35e-15 | 33 |
neuronal stem cell | 7.35e-15 | 33 |
neuroblast | 7.35e-15 | 33 |
electrically signaling cell | 7.35e-15 | 33 |
electrically responsive cell | 7.78e-12 | 39 |
electrically active cell | 7.78e-12 | 39 |
neural cell | 2.68e-10 | 43 |
ectodermal cell | 5.85e-10 | 44 |
neurectodermal cell | 5.85e-10 | 44 |
striatum neuron | 2.32e-07 | 3 |
granule cell | 2.92e-07 | 3 |
raphe nuclei neuron | 7.16e-07 | 3 |