FFCP PHASE1:Mm9::chr18:25912827..25912835,-: Difference between revisions
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{{FFCP|EntrezGene=108013|HGNC=|MCL_coexpression_id=1|UniProt=Q7TSY6|association_with_transcript=-343bp_to_ENSMUST00000025117,ENSMUST00000078609,ENSMUST00000115816,NM_001146292,NM_001146293,NM_001146294,NM_001146295,NM_001174074,NM_133195,uc008ehk.2,uc008ehl.2,uc012ban.1,uc012bao.1,uc012bap.1,uc012baq.1_5end|description=CAGE_peak_9_at_Celf4_5end|id=chr18:25912827..25912835,-|ontology_enrichment_celltype=CL:0000117!3.37e-17!23;CL:0000337!3.37e-17!23;CL:0000540!2.36e-12!33;CL:0000047!2.36e-12!33;CL:0000031!2.36e-12!33;CL:0000404!2.36e-12!33;CL:0000393!2.24e-09!39;CL:0000211!2.24e-09!39;CL:0002319!6.90e-08!43;CL:0000221!1.46e-07!44;CL:0000133!1.46e-07!44|ontology_enrichment_celltype_v019_2=CL:0000117,1.88e-18,23;CL:0000337,1.88e-18,23;CL:0000540,4.60e-12,33;CL:0000047,4.60e-12,33;CL:0000031,4.60e-12,33;CL:0000404,4.60e-12,33;CL:0002613,3.32e-10,3;CL:0000393,8.29e-10,39;CL:0000211,8.29e-10,39;CL:0002319,1.17e-08,43;CL:0000221,2.11e-08,44;CL:0000133,2.11e-08,44|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001049!3.56e-30!52;UBERON:0005068!3.56e-30!52;UBERON:0006241!3.56e-30!52;UBERON:0007135!3.56e-30!52;UBERON:0002020!1.77e-29!34;UBERON:0001017!3.67e-27!73;UBERON:0005743!3.67e-27!73;UBERON:0000955!5.74e-27!50;UBERON:0006238!5.74e-27!50;UBERON:0000073!5.30e-26!75;UBERON:0001016!5.30e-26!75;UBERON:0002616!8.04e-26!49;UBERON:0002346!3.32e-25!71;UBERON:0003075!3.32e-25!71;UBERON:0007284!3.32e-25!71;UBERON:0002791!1.43e-24!29;UBERON:0003528!1.43e-24!29;UBERON:0001893!1.43e-24!29;UBERON:0003080!6.68e-23!40;UBERON:0000033!6.20e-22!63;UBERON:0002780!7.31e-22!39;UBERON:0001890!7.31e-22!39;UBERON:0006240!7.31e-22!39;UBERON:0003056!4.00e-20!49;UBERON:0004121!2.67e-19!102;UBERON:0000924!2.67e-19!102;UBERON:0006601!2.67e-19!102;UBERON:0000956!4.25e-16!21;UBERON:0001869!4.25e-16!21;UBERON:0000203!4.25e-16!21;UBERON:0007811!1.70e-12!86;UBERON:0002021!1.76e-12!10;UBERON:0000411!1.76e-12!10;UBERON:0001950!1.76e-12!10;UBERON:0002619!2.14e-12!17;UBERON:0000153!2.27e-10!94;UBERON:0002420!1.01e-09!8;UBERON:0007245!1.01e-09!8;UBERON:0010009!1.01e-09!8;UBERON:0010011!1.01e-09!8;UBERON:0000454!1.01e-09!8;UBERON:0000025!3.23e-08!114;UBERON:0003076!1.24e-07!12;UBERON:0003057!1.24e-07!12;UBERON:0004111!1.80e-07!122;UBERON:0000369!5.63e-07!5;UBERON:0002435!5.63e-07!5;UBERON:0000204!5.63e-07!5;UBERON:0010082!5.63e-07!5;UBERON:0002298!6.14e-07!6|ontology_enrichment_uberon_v019_2=UBERON:0002020,7.60e-38,34;UBERON:0000073,8.67e-35,54;UBERON:0003528,1.36e-33,29;UBERON:0002791,1.36e-33,29;UBERON:0001893,1.36e-33,29;UBERON:0003080,8.08e-32,40;UBERON:0001017,4.30e-31,73;UBERON:0001049,9.63e-31,52;UBERON:0005068,9.63e-31,52;UBERON:0006241,9.63e-31,52;UBERON:0007135,9.63e-31,52;UBERON:0001016,4.03e-30,75;UBERON:0002780,1.13e-29,39;UBERON:0001890,1.13e-29,39;UBERON:0006240,1.13e-29,39;UBERON:0000955,3.35e-29,47;UBERON:0006238,3.35e-29,47;UBERON:0002616,4.58e-27,46;UBERON:0003056,3.99e-25,49;UBERON:0002346,4.89e-24,64;UBERON:0003075,4.89e-24,64;UBERON:0007284,4.89e-24,64;UBERON:0002021,1.42e-23,10;UBERON:0000411,1.42e-23,10;UBERON:0001950,1.42e-23,10;UBERON:0004121,1.21e-22,95;UBERON:0000924,1.21e-22,95;UBERON:0006601,1.21e-22,95;UBERON:0010371,1.89e-20,73;UBERON:0000956,1.82e-18,21;UBERON:0001869,1.82e-18,21;UBERON:0000203,1.82e-18,21;UBERON:0002420,2.05e-17,8;UBERON:0007245,2.05e-17,8;UBERON:0010009,2.05e-17,8;UBERON:0010011,2.05e-17,8;UBERON:0000454,2.05e-17,8;UBERON:0002619,2.69e-16,17;UBERON:0010314,3.56e-15,92;UBERON:0000369,9.34e-15,5;UBERON:0002435,9.34e-15,5;UBERON:0000204,9.34e-15,5;UBERON:0010082,9.34e-15,5;UBERON:0000025,2.95e-11,114;UBERON:0004111,3.52e-10,122;UBERON:0011216,3.20e-08,194;UBERON:0002950,3.90e-07,4;UBERON:0001891,3.90e-07,4;UBERON:0009616,3.90e-07,4;UBERON:0010286,3.90e-07,4|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255129870453209,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.21389876515759,1.5869729378161,0,0.338844532069132,0,0,0,0,0,0,0.829516898467821,1.21505344498522,0.420649922702764,1.42825492201902,0.441737081903227,0.979926393719632,0.958454710182364,0,0,1.27687338085188,1.53606533256243,1.71452174049252,2.19570344645783,3.64639359389732,0.279182999001381,1.68828783009504,1.68078072554491,1.17851434189467,0.711858403995515,1.3047961207771,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0,0,0,0.304465478312141,0,0.301445281105245,0,0,0,0.289198713839823,0,0,0,0,0,0.878342391034642,0.209446706813455,0,0,0,0,1.49790639404823,1.37250180845588,1.00523481690292,1.73824320192276,3.06858548796397,1.24672826735736,2.10913641988085,0.101839363850316,0,0,0.210441855886474,0,0,0,0,0.136072998302656,0.12811372028485,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116765342367169,0,0,0,0,0,0,1.68231958851302,0.411618449517138,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0701358198903186,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.642202359951168,0.703270119553219,0,0,0,0.390438744296638,0,0,0,0,0,0,0.395287777946524,1.92792789853084,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18006109403131,0.129358683782755,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.370850604021019,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117357238645754,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.187682475451182,0,0,0.501572104035363,4.51801474093653,1.38097570952153,2.29158205375759,1.71853182343688,2.05524755931193,1.5107877947794,1.35004500046361,0.45032120322422,2.26571204492102,3.62432218226274,0,0.399024873401031,0.170733605754134,0,0,0.735374033800057,0.222246727801615,0,0,0.758091635291392,0.25347929989024,0.188626341386076,0.0936415074698824,0.192075457214608,0.17230640686684,0,0.115884325944855,0.38581844092741,0.824171801606613,0,0,0.177475806159338,0.238436189947321,0.145346416632329,0.188218760830661,0.0846146078916765,0,0.263069711437843,0.271608227691724,0.561142271657738,0,0.197008964751127,0,0,0.385813221962283,0,0.467863216890817,0,0.191288332068843,0,0.231867835620421|short_description=p9@Celf4}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:108013 | |||
|HGNC= | |||
|MCL_coexpression_id=1 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:Q7TSY6 | |||
|association_with_transcript=-343bp_to_ENSMUST00000025117,ENSMUST00000078609,ENSMUST00000115816,NM_001146292,NM_001146293,NM_001146294,NM_001146295,NM_001174074,NM_133195,uc008ehk.2,uc008ehl.2,uc012ban.1,uc012bao.1,uc012bap.1,uc012baq.1_5end | |||
|cluster_id=chr18:25912827..25912835,- | |||
|description=CAGE_peak_9_at_Celf4_5end | |||
|id=chr18:25912827..25912835,- | |||
|ontology_enrichment_celltype=CL:0000117!3.37e-17!23;CL:0000337!3.37e-17!23;CL:0000540!2.36e-12!33;CL:0000047!2.36e-12!33;CL:0000031!2.36e-12!33;CL:0000404!2.36e-12!33;CL:0000393!2.24e-09!39;CL:0000211!2.24e-09!39;CL:0002319!6.90e-08!43;CL:0000221!1.46e-07!44;CL:0000133!1.46e-07!44 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,1.88e-18,23;CL:0000337,1.88e-18,23;CL:0000540,4.60e-12,33;CL:0000047,4.60e-12,33;CL:0000031,4.60e-12,33;CL:0000404,4.60e-12,33;CL:0002613,3.32e-10,3;CL:0000393,8.29e-10,39;CL:0000211,8.29e-10,39;CL:0002319,1.17e-08,43;CL:0000221,2.11e-08,44;CL:0000133,2.11e-08,44 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!3.56e-30!52;UBERON:0005068!3.56e-30!52;UBERON:0006241!3.56e-30!52;UBERON:0007135!3.56e-30!52;UBERON:0002020!1.77e-29!34;UBERON:0001017!3.67e-27!73;UBERON:0005743!3.67e-27!73;UBERON:0000955!5.74e-27!50;UBERON:0006238!5.74e-27!50;UBERON:0000073!5.30e-26!75;UBERON:0001016!5.30e-26!75;UBERON:0002616!8.04e-26!49;UBERON:0002346!3.32e-25!71;UBERON:0003075!3.32e-25!71;UBERON:0007284!3.32e-25!71;UBERON:0002791!1.43e-24!29;UBERON:0003528!1.43e-24!29;UBERON:0001893!1.43e-24!29;UBERON:0003080!6.68e-23!40;UBERON:0000033!6.20e-22!63;UBERON:0002780!7.31e-22!39;UBERON:0001890!7.31e-22!39;UBERON:0006240!7.31e-22!39;UBERON:0003056!4.00e-20!49;UBERON:0004121!2.67e-19!102;UBERON:0000924!2.67e-19!102;UBERON:0006601!2.67e-19!102;UBERON:0000956!4.25e-16!21;UBERON:0001869!4.25e-16!21;UBERON:0000203!4.25e-16!21;UBERON:0007811!1.70e-12!86;UBERON:0002021!1.76e-12!10;UBERON:0000411!1.76e-12!10;UBERON:0001950!1.76e-12!10;UBERON:0002619!2.14e-12!17;UBERON:0000153!2.27e-10!94;UBERON:0002420!1.01e-09!8;UBERON:0007245!1.01e-09!8;UBERON:0010009!1.01e-09!8;UBERON:0010011!1.01e-09!8;UBERON:0000454!1.01e-09!8;UBERON:0000025!3.23e-08!114;UBERON:0003076!1.24e-07!12;UBERON:0003057!1.24e-07!12;UBERON:0004111!1.80e-07!122;UBERON:0000369!5.63e-07!5;UBERON:0002435!5.63e-07!5;UBERON:0000204!5.63e-07!5;UBERON:0010082!5.63e-07!5;UBERON:0002298!6.14e-07!6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002020,7.60e-38,34;UBERON:0000073,8.67e-35,54;UBERON:0003528,1.36e-33,29;UBERON:0002791,1.36e-33,29;UBERON:0001893,1.36e-33,29;UBERON:0003080,8.08e-32,40;UBERON:0001017,4.30e-31,73;UBERON:0001049,9.63e-31,52;UBERON:0005068,9.63e-31,52;UBERON:0006241,9.63e-31,52;UBERON:0007135,9.63e-31,52;UBERON:0001016,4.03e-30,75;UBERON:0002780,1.13e-29,39;UBERON:0001890,1.13e-29,39;UBERON:0006240,1.13e-29,39;UBERON:0000955,3.35e-29,47;UBERON:0006238,3.35e-29,47;UBERON:0002616,4.58e-27,46;UBERON:0003056,3.99e-25,49;UBERON:0002346,4.89e-24,64;UBERON:0003075,4.89e-24,64;UBERON:0007284,4.89e-24,64;UBERON:0002021,1.42e-23,10;UBERON:0000411,1.42e-23,10;UBERON:0001950,1.42e-23,10;UBERON:0004121,1.21e-22,95;UBERON:0000924,1.21e-22,95;UBERON:0006601,1.21e-22,95;UBERON:0010371,1.89e-20,73;UBERON:0000956,1.82e-18,21;UBERON:0001869,1.82e-18,21;UBERON:0000203,1.82e-18,21;UBERON:0002420,2.05e-17,8;UBERON:0007245,2.05e-17,8;UBERON:0010009,2.05e-17,8;UBERON:0010011,2.05e-17,8;UBERON:0000454,2.05e-17,8;UBERON:0002619,2.69e-16,17;UBERON:0010314,3.56e-15,92;UBERON:0000369,9.34e-15,5;UBERON:0002435,9.34e-15,5;UBERON:0000204,9.34e-15,5;UBERON:0010082,9.34e-15,5;UBERON:0000025,2.95e-11,114;UBERON:0004111,3.52e-10,122;UBERON:0011216,3.20e-08,194;UBERON:0002950,3.90e-07,4;UBERON:0001891,3.90e-07,4;UBERON:0009616,3.90e-07,4;UBERON:0010286,3.90e-07,4 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255129870453209,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.21389876515759,1.5869729378161,0,0.338844532069132,0,0,0,0,0,0,0.829516898467821,1.21505344498522,0.420649922702764,1.42825492201902,0.441737081903227,0.979926393719632,0.958454710182364,0,0,1.27687338085188,1.53606533256243,1.71452174049252,2.19570344645783,3.64639359389732,0.279182999001381,1.68828783009504,1.68078072554491,1.17851434189467,0.711858403995515,1.3047961207771,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0,0,0,0.304465478312141,0,0.301445281105245,0,0,0,0.289198713839823,0,0,0,0,0,0.878342391034642,0.209446706813455,0,0,0,0,1.49790639404823,1.37250180845588,1.00523481690292,1.73824320192276,3.06858548796397,1.24672826735736,2.10913641988085,0.101839363850316,0,0,0.210441855886474,0,0,0,0,0.136072998302656,0.12811372028485,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116765342367169,0,0,0,0,0,0,1.68231958851302,0.411618449517138,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0701358198903186,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.642202359951168,0.703270119553219,0,0,0,0.390438744296638,0,0,0,0,0,0,0.395287777946524,1.92792789853084,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18006109403131,0.129358683782755,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.370850604021019,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117357238645754,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.187682475451182,0,0,0.501572104035363,4.51801474093653,1.38097570952153,2.29158205375759,1.71853182343688,2.05524755931193,1.5107877947794,1.35004500046361,0.45032120322422,2.26571204492102,3.62432218226274,0,0.399024873401031,0.170733605754134,0,0,0.735374033800057,0.222246727801615,0,0,0.758091635291392,0.25347929989024,0.188626341386076,0.0936415074698824,0.192075457214608,0.17230640686684,0,0.115884325944855,0.38581844092741,0.824171801606613,0,0,0.177475806159338,0.238436189947321,0.145346416632329,0.188218760830661,0.0846146078916765,0,0.263069711437843,0.271608227691724,0.561142271657738,0,0.197008964751127,0,0,0.385813221962283,0,0.467863216890817,0,0.191288332068843,0,0.231867835620421 | |||
|short_description=p9@Celf4 | |||
}} |
Revision as of 14:56, 5 August 2015
Short description: | p9@Celf4 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_9_at_Celf4_5end |
Coexpression cluster: | MCL_coexpression_mm9:1 |
Association with transcript: | -343bp_to_ENSMUST00000025117, ENSMUST00000078609, ENSMUST00000115816, NM_001146292, NM_001146293, NM_001146294, NM_001146295, NM_001174074, NM_133195, uc008ehk.2, uc008ehl.2, uc012ban.1, uc012bao.1, uc012bap.1, uc012baq.1_5end |
EntrezGene: | 108013 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 1.88e-18 | 23 |
neuroblast (sensu Vertebrata) | 1.88e-18 | 23 |
neuron | 4.60e-12 | 33 |
neuronal stem cell | 4.60e-12 | 33 |
neuroblast | 4.60e-12 | 33 |
electrically signaling cell | 4.60e-12 | 33 |
striatum neuron | 3.32e-10 | 3 |
electrically responsive cell | 8.29e-10 | 39 |
electrically active cell | 8.29e-10 | 39 |
neural cell | 1.17e-08 | 43 |
ectodermal cell | 2.11e-08 | 44 |
neurectodermal cell | 2.11e-08 | 44 |