FFCP PHASE1:Mm9::chr6:60779699..60779746,-: Difference between revisions
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{{FFCP|EntrezGene=20617|HGNC=|MCL_coexpression_id=2|UniProt=O55042|association_with_transcript=102bp_to_ENSMUST00000163779,NM_009221,uc009cdo.1_5end|description=CAGE_peak_4_at_Snca_5end|id=chr6:60779699..60779746,-|ontology_enrichment_celltype=CL:0000117!1.44e-16!23;CL:0000337!1.44e-16!23;CL:0000540!1.06e-10!33;CL:0000047!1.06e-10!33;CL:0000031!1.06e-10!33;CL:0000404!1.06e-10!33;CL:0000393!1.06e-07!39;CL:0000211!1.06e-07!39;CL:0000221!5.83e-07!44;CL:0000133!5.83e-07!44;CL:0002319!8.15e-07!43|ontology_enrichment_celltype_v019_2=CL:0000117,1.95e-21,23;CL:0000337,1.95e-21,23;CL:0000540,1.01e-13,33;CL:0000047,1.01e-13,33;CL:0000031,1.01e-13,33;CL:0000404,1.01e-13,33;CL:0000393,5.20e-11,39;CL:0000211,5.20e-11,39;CL:0002319,1.25e-09,43;CL:0000221,2.52e-09,44;CL:0000133,2.52e-09,44;CL:0002614,2.41e-07,3;CL:0002610,4.78e-07,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002020!1.01e-23!34;UBERON:0001049!6.32e-23!52;UBERON:0005068!6.32e-23!52;UBERON:0006241!6.32e-23!52;UBERON:0007135!6.32e-23!52;UBERON:0000955!1.25e-21!50;UBERON:0006238!1.25e-21!50;UBERON:0001017!4.61e-21!73;UBERON:0005743!4.61e-21!73;UBERON:0000073!7.88e-21!75;UBERON:0001016!7.88e-21!75;UBERON:0002616!8.21e-21!49;UBERON:0002791!7.08e-20!29;UBERON:0003528!7.08e-20!29;UBERON:0001893!7.08e-20!29;UBERON:0000033!7.84e-19!63;UBERON:0003080!3.85e-17!40;UBERON:0002346!5.67e-17!71;UBERON:0003075!5.67e-17!71;UBERON:0007284!5.67e-17!71;UBERON:0002780!2.01e-16!39;UBERON:0001890!2.01e-16!39;UBERON:0006240!2.01e-16!39;UBERON:0003056!4.87e-16!49;UBERON:0004121!2.04e-14!102;UBERON:0000924!2.04e-14!102;UBERON:0006601!2.04e-14!102;UBERON:0000956!9.88e-14!21;UBERON:0001869!9.88e-14!21;UBERON:0000203!9.88e-14!21;UBERON:0002619!1.29e-11!17;UBERON:0002021!8.74e-11!10;UBERON:0000411!8.74e-11!10;UBERON:0001950!8.74e-11!10;UBERON:0007811!2.55e-09!86;UBERON:0000153!2.96e-08!94;UBERON:0000025!5.81e-08!114;UBERON:0002420!2.27e-07!8;UBERON:0007245!2.27e-07!8;UBERON:0010009!2.27e-07!8;UBERON:0010011!2.27e-07!8;UBERON:0000454!2.27e-07!8|ontology_enrichment_uberon_v019_2=UBERON:0000073,4.14e-48,54;UBERON:0001049,3.08e-44,52;UBERON:0005068,3.08e-44,52;UBERON:0006241,3.08e-44,52;UBERON:0007135,3.08e-44,52;UBERON:0001017,2.57e-42,73;UBERON:0002020,9.03e-42,34;UBERON:0001016,5.78e-41,75;UBERON:0000955,7.07e-36,47;UBERON:0006238,7.07e-36,47;UBERON:0002346,1.89e-34,64;UBERON:0003075,1.89e-34,64;UBERON:0007284,1.89e-34,64;UBERON:0002616,4.19e-34,46;UBERON:0003528,4.94e-33,29;UBERON:0002791,4.94e-33,29;UBERON:0001893,4.94e-33,29;UBERON:0004121,1.46e-30,95;UBERON:0000924,1.46e-30,95;UBERON:0006601,1.46e-30,95;UBERON:0003080,1.09e-29,40;UBERON:0010371,3.24e-29,73;UBERON:0002780,4.12e-28,39;UBERON:0001890,4.12e-28,39;UBERON:0006240,4.12e-28,39;UBERON:0002021,2.29e-23,10;UBERON:0000411,2.29e-23,10;UBERON:0001950,2.29e-23,10;UBERON:0003056,4.60e-23,49;UBERON:0000956,6.00e-22,21;UBERON:0001869,6.00e-22,21;UBERON:0000203,6.00e-22,21;UBERON:0010314,1.59e-21,92;UBERON:0002619,3.34e-21,17;UBERON:0000025,8.08e-16,114;UBERON:0003076,1.64e-14,12;UBERON:0003057,1.64e-14,12;UBERON:0004111,2.97e-14,122;UBERON:0002420,4.27e-12,8;UBERON:0007245,4.27e-12,8;UBERON:0010009,4.27e-12,8;UBERON:0010011,4.27e-12,8;UBERON:0000454,4.27e-12,8;UBERON:0002240,1.66e-11,6;UBERON:0005174,1.66e-11,6;UBERON:0001137,1.66e-11,6;UBERON:0011216,1.53e-10,194;UBERON:0001948,7.99e-10,5;UBERON:0002315,7.99e-10,5;UBERON:0002950,5.61e-09,4;UBERON:0001891,5.61e-09,4;UBERON:0009616,5.61e-09,4;UBERON:0010286,5.61e-09,4;UBERON:0000483,1.34e-07,174;UBERON:0000119,2.01e-07,176;UBERON:0002038,2.41e-07,3;UBERON:0009663,2.41e-07,3;UBERON:0009661,2.41e-07,3;UBERON:0000125,2.41e-07,3;UBERON:0002308,2.41e-07,3;UBERON:0004684,4.78e-07,3;UBERON:0002275,4.78e-07,3|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.607425802169478,0,0,0,0.42438965179803,2.8064285749853,0,0,0.159992422793407,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.42779753031517,2.11596391708813,0.633831403506179,0,0,0,0.988866362566974,0,0,0,0.207379224616955,0.540023753326763,1.05162480675691,1.42825492201902,5.30084498283872,0.734944795289724,0.575072826109418,1.83843757322004,4.40463523997555,6.89511625660014,5.37622866396852,0.791317726381163,1.46380229763855,2.08365348222704,6.14202597803038,9.56696437053856,9.62628960993904,4.12480019663135,5.26775218956681,1.67759501242771,0,0.226714680320357,0,0,0,0,0,0,0.421333260395256,0,0,0,0.14084341977668,0,0,0,0,0,0,0.34255163915718,0,0,0,0.304465478312141,0,0,0,0,0,0,0,0,0,0,0,1.75668478206928,1.25668024088073,0,0,0,0,3.44518470631092,11.8950156732843,3.64397621127307,17.0347833788431,19.6900902144355,7.68815764870372,10.8701646255398,0,0.124406970610093,0,0,0,0.459804208866946,0.360124259610698,0,0.340182495756639,0.12811372028485,0.281105173679186,0,0.215567992932842,0,0.351902248327898,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116765342367169,0,0,0,0.146199987425332,0.658650345873152,0.536825675041487,16.1923260394378,5.14523061896422,0,0,0,0,0,0,0,0,0,0,0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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:20617 | |||
|HGNC= | |||
|MCL_coexpression_id=2 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:O55042 | |||
|association_with_transcript=102bp_to_ENSMUST00000163779,NM_009221,uc009cdo.1_5end | |||
|cluster_id=chr6:60779699..60779746,- | |||
|description=CAGE_peak_4_at_Snca_5end | |||
|id=chr6:60779699..60779746,- | |||
|ontology_enrichment_celltype=CL:0000117!1.44e-16!23;CL:0000337!1.44e-16!23;CL:0000540!1.06e-10!33;CL:0000047!1.06e-10!33;CL:0000031!1.06e-10!33;CL:0000404!1.06e-10!33;CL:0000393!1.06e-07!39;CL:0000211!1.06e-07!39;CL:0000221!5.83e-07!44;CL:0000133!5.83e-07!44;CL:0002319!8.15e-07!43 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,1.95e-21,23;CL:0000337,1.95e-21,23;CL:0000540,1.01e-13,33;CL:0000047,1.01e-13,33;CL:0000031,1.01e-13,33;CL:0000404,1.01e-13,33;CL:0000393,5.20e-11,39;CL:0000211,5.20e-11,39;CL:0002319,1.25e-09,43;CL:0000221,2.52e-09,44;CL:0000133,2.52e-09,44;CL:0002614,2.41e-07,3;CL:0002610,4.78e-07,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002020!1.01e-23!34;UBERON:0001049!6.32e-23!52;UBERON:0005068!6.32e-23!52;UBERON:0006241!6.32e-23!52;UBERON:0007135!6.32e-23!52;UBERON:0000955!1.25e-21!50;UBERON:0006238!1.25e-21!50;UBERON:0001017!4.61e-21!73;UBERON:0005743!4.61e-21!73;UBERON:0000073!7.88e-21!75;UBERON:0001016!7.88e-21!75;UBERON:0002616!8.21e-21!49;UBERON:0002791!7.08e-20!29;UBERON:0003528!7.08e-20!29;UBERON:0001893!7.08e-20!29;UBERON:0000033!7.84e-19!63;UBERON:0003080!3.85e-17!40;UBERON:0002346!5.67e-17!71;UBERON:0003075!5.67e-17!71;UBERON:0007284!5.67e-17!71;UBERON:0002780!2.01e-16!39;UBERON:0001890!2.01e-16!39;UBERON:0006240!2.01e-16!39;UBERON:0003056!4.87e-16!49;UBERON:0004121!2.04e-14!102;UBERON:0000924!2.04e-14!102;UBERON:0006601!2.04e-14!102;UBERON:0000956!9.88e-14!21;UBERON:0001869!9.88e-14!21;UBERON:0000203!9.88e-14!21;UBERON:0002619!1.29e-11!17;UBERON:0002021!8.74e-11!10;UBERON:0000411!8.74e-11!10;UBERON:0001950!8.74e-11!10;UBERON:0007811!2.55e-09!86;UBERON:0000153!2.96e-08!94;UBERON:0000025!5.81e-08!114;UBERON:0002420!2.27e-07!8;UBERON:0007245!2.27e-07!8;UBERON:0010009!2.27e-07!8;UBERON:0010011!2.27e-07!8;UBERON:0000454!2.27e-07!8 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,4.14e-48,54;UBERON:0001049,3.08e-44,52;UBERON:0005068,3.08e-44,52;UBERON:0006241,3.08e-44,52;UBERON:0007135,3.08e-44,52;UBERON:0001017,2.57e-42,73;UBERON:0002020,9.03e-42,34;UBERON:0001016,5.78e-41,75;UBERON:0000955,7.07e-36,47;UBERON:0006238,7.07e-36,47;UBERON:0002346,1.89e-34,64;UBERON:0003075,1.89e-34,64;UBERON:0007284,1.89e-34,64;UBERON:0002616,4.19e-34,46;UBERON:0003528,4.94e-33,29;UBERON:0002791,4.94e-33,29;UBERON:0001893,4.94e-33,29;UBERON:0004121,1.46e-30,95;UBERON:0000924,1.46e-30,95;UBERON:0006601,1.46e-30,95;UBERON:0003080,1.09e-29,40;UBERON:0010371,3.24e-29,73;UBERON:0002780,4.12e-28,39;UBERON:0001890,4.12e-28,39;UBERON:0006240,4.12e-28,39;UBERON:0002021,2.29e-23,10;UBERON:0000411,2.29e-23,10;UBERON:0001950,2.29e-23,10;UBERON:0003056,4.60e-23,49;UBERON:0000956,6.00e-22,21;UBERON:0001869,6.00e-22,21;UBERON:0000203,6.00e-22,21;UBERON:0010314,1.59e-21,92;UBERON:0002619,3.34e-21,17;UBERON:0000025,8.08e-16,114;UBERON:0003076,1.64e-14,12;UBERON:0003057,1.64e-14,12;UBERON:0004111,2.97e-14,122;UBERON:0002420,4.27e-12,8;UBERON:0007245,4.27e-12,8;UBERON:0010009,4.27e-12,8;UBERON:0010011,4.27e-12,8;UBERON:0000454,4.27e-12,8;UBERON:0002240,1.66e-11,6;UBERON:0005174,1.66e-11,6;UBERON:0001137,1.66e-11,6;UBERON:0011216,1.53e-10,194;UBERON:0001948,7.99e-10,5;UBERON:0002315,7.99e-10,5;UBERON:0002950,5.61e-09,4;UBERON:0001891,5.61e-09,4;UBERON:0009616,5.61e-09,4;UBERON:0010286,5.61e-09,4;UBERON:0000483,1.34e-07,174;UBERON:0000119,2.01e-07,176;UBERON:0002038,2.41e-07,3;UBERON:0009663,2.41e-07,3;UBERON:0009661,2.41e-07,3;UBERON:0000125,2.41e-07,3;UBERON:0002308,2.41e-07,3;UBERON:0004684,4.78e-07,3;UBERON:0002275,4.78e-07,3 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.607425802169478,0,0,0,0.42438965179803,2.8064285749853,0,0,0.159992422793407,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.42779753031517,2.11596391708813,0.633831403506179,0,0,0,0.988866362566974,0,0,0,0.207379224616955,0.540023753326763,1.05162480675691,1.42825492201902,5.30084498283872,0.734944795289724,0.575072826109418,1.83843757322004,4.40463523997555,6.89511625660014,5.37622866396852,0.791317726381163,1.46380229763855,2.08365348222704,6.14202597803038,9.56696437053856,9.62628960993904,4.12480019663135,5.26775218956681,1.67759501242771,0,0.226714680320357,0,0,0,0,0,0,0.421333260395256,0,0,0,0.14084341977668,0,0,0,0,0,0,0.34255163915718,0,0,0,0.304465478312141,0,0,0,0,0,0,0,0,0,0,0,1.75668478206928,1.25668024088073,0,0,0,0,3.44518470631092,11.8950156732843,3.64397621127307,17.0347833788431,19.6900902144355,7.68815764870372,10.8701646255398,0,0.124406970610093,0,0,0,0.459804208866946,0.360124259610698,0,0.340182495756639,0.12811372028485,0.281105173679186,0,0.215567992932842,0,0.351902248327898,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116765342367169,0,0,0,0.146199987425332,0.658650345873152,0.536825675041487,16.1923260394378,5.14523061896422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.114248512609729,0,0,0,0,0,0,0,0,0,0.166845105716094,0,0.224862112384854,0.405720242777006,0,0.25462585178142,0,0,0,0,0.372140947668503,0,0,0.179397413521912,0,0,0,0.162964976442026,0,0,0,0,0,0,0,0,0.327726629431476,0.172684981865896,0.144649058581512,0,0,0,0,3.05046120976805,3.8679856575427,0,0,0,0,0,0.477937595905104,0,0,0,0.292255857911312,0,5.78378369559253,0,0,0,0,0,0,0,0,0,0,0.258428293168221,0,0,0,0,0,0,0,0,0.214337035031592,0,0,0.164549020602121,0,0,0,0,0,0,0,0,0,0,3.70850604021019,0.512612642393558,0.206386867963223,0.185194527369712,0.565105371014073,0.136694227721025,0.915112692826091,0,0,0,0,0,0.203319467126849,0.216010681643603,0.209088296014469,0.436725127492355,0,0.165306911450672,0,0,0,0,0.149516546043979,0,0,0,0.168956125490778,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.221985953374065,0,0.167884616364078,0,0,0,0,0,18.6368108063632,18.8733346967943,23.4887160510153,15.9823459579629,27.4033007908257,39.2804826642644,27.0009000092722,21.1650965515384,19.938265995305,25.3702552758392,0,0,0.512200817262403,0.486213434136588,0.209613162627982,0.551530525350042,0.44449345560323,0,0.320919209591815,0.252697211763798,0.50695859978048,0.377252682772152,0.842773567228942,0.192075457214608,0.402048282689293,0.476293691283074,0.231768651889711,0.578727661391115,0.412085900803307,0.588795680537589,0,0.177475806159338,0.238436189947321,0.436039249896986,0,0.507687647350059,0.365855945745545,0.789209134313529,0.271608227691724,0,0.711810108745045,0.591026894253381,0,0.464810523557898,0,0.749431733813838,0.233931608445408,0.429742108096597,0.191288332068843,0,0 | |||
|short_description=p4@Snca | |||
}} |
Revision as of 00:26, 6 August 2015
Short description: | p4@Snca |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_Snca_5end |
Coexpression cluster: | MCL_coexpression_mm9:2 |
Association with transcript: | 102bp_to_ENSMUST00000163779, NM_009221, uc009cdo.1_5end |
EntrezGene: | 20617 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 1.95e-21 | 23 |
neuroblast (sensu Vertebrata) | 1.95e-21 | 23 |
neuron | 1.01e-13 | 33 |
neuronal stem cell | 1.01e-13 | 33 |
neuroblast | 1.01e-13 | 33 |
electrically signaling cell | 1.01e-13 | 33 |
electrically responsive cell | 5.20e-11 | 39 |
electrically active cell | 5.20e-11 | 39 |
neural cell | 1.25e-09 | 43 |
ectodermal cell | 2.52e-09 | 44 |
neurectodermal cell | 2.52e-09 | 44 |
neuron of the substantia nigra | 2.41e-07 | 3 |
raphe nuclei neuron | 4.78e-07 | 3 |