FFCP PHASE1:Mm9::chr1:75260841..75260850,-: Difference between revisions
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{{FFCP|EntrezGene=19275|HGNC=|MCL_coexpression_id=1|UniProt=A6MDD2,Q3UTI6,Q6NVE2|association_with_transcript=-58bp_to_ENSMUST00000027404,NM_008985,uc007boq.1,uc007bor.1,uc011wnn.1_5end|description=CAGE_peak_3_at_Ptprn_5end|id=chr1:75260841..75260850,-|ontology_enrichment_celltype=CL:0000117!3.63e-09!23;CL:0000337!3.63e-09!23;CL:0000540!5.01e-09!33;CL:0000047!5.01e-09!33;CL:0000031!5.01e-09!33;CL:0000404!5.01e-09!33;CL:0000393!9.97e-08!39;CL:0000211!9.97e-08!39;CL:0002319!3.93e-07!43;CL:0000221!7.57e-07!44;CL:0000133!7.57e-07!44|ontology_enrichment_celltype_v019_2=CL:0002610,5.39e-10,3;CL:0002614,6.61e-10,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000073!7.24e-36!75;UBERON:0001016!7.24e-36!75;UBERON:0000955!8.86e-35!50;UBERON:0006238!8.86e-35!50;UBERON:0001017!1.97e-34!73;UBERON:0005743!1.97e-34!73;UBERON:0002616!1.38e-33!49;UBERON:0001049!3.98e-32!52;UBERON:0005068!3.98e-32!52;UBERON:0006241!3.98e-32!52;UBERON:0007135!3.98e-32!52;UBERON:0002346!1.20e-30!71;UBERON:0003075!1.20e-30!71;UBERON:0007284!1.20e-30!71;UBERON:0000033!1.47e-30!63;UBERON:0004121!2.54e-30!102;UBERON:0000924!2.54e-30!102;UBERON:0006601!2.54e-30!102;UBERON:0003080!1.68e-26!40;UBERON:0003056!2.38e-25!49;UBERON:0002780!3.59e-25!39;UBERON:0001890!3.59e-25!39;UBERON:0006240!3.59e-25!39;UBERON:0007811!1.28e-19!86;UBERON:0002020!2.87e-18!34;UBERON:0002791!2.90e-17!29;UBERON:0003528!2.90e-17!29;UBERON:0001893!2.90e-17!29;UBERON:0000153!8.77e-17!94;UBERON:0002021!6.76e-13!10;UBERON:0000411!6.76e-13!10;UBERON:0001950!6.76e-13!10;UBERON:0002420!7.39e-10!8;UBERON:0007245!7.39e-10!8;UBERON:0010009!7.39e-10!8;UBERON:0010011!7.39e-10!8;UBERON:0000454!7.39e-10!8;UBERON:0000956!1.53e-09!21;UBERON:0001869!1.53e-09!21;UBERON:0000203!1.53e-09!21;UBERON:0002619!2.07e-09!17;UBERON:0002298!2.62e-09!6;UBERON:0000025!2.82e-09!114;UBERON:0001894!7.94e-09!10;UBERON:0006222!7.94e-09!10;UBERON:0004111!6.48e-08!122|ontology_enrichment_uberon_v019_2=UBERON:0000073,7.49e-38,54;UBERON:0000955,2.91e-34,47;UBERON:0006238,2.91e-34,47;UBERON:0001049,2.28e-33,52;UBERON:0005068,2.28e-33,52;UBERON:0006241,2.28e-33,52;UBERON:0007135,2.28e-33,52;UBERON:0002616,3.38e-32,46;UBERON:0001017,2.57e-31,73;UBERON:0001016,2.44e-30,75;UBERON:0002021,1.35e-26,10;UBERON:0000411,1.35e-26,10;UBERON:0001950,1.35e-26,10;UBERON:0002346,3.73e-26,64;UBERON:0003075,3.73e-26,64;UBERON:0007284,3.73e-26,64;UBERON:0003080,3.70e-25,40;UBERON:0002780,5.77e-23,39;UBERON:0001890,5.77e-23,39;UBERON:0006240,5.77e-23,39;UBERON:0004121,8.13e-23,95;UBERON:0000924,8.13e-23,95;UBERON:0006601,8.13e-23,95;UBERON:0010371,2.69e-22,73;UBERON:0003528,3.72e-22,29;UBERON:0002791,3.72e-22,29;UBERON:0001893,3.72e-22,29;UBERON:0002020,8.07e-21,34;UBERON:0003056,9.37e-20,49;UBERON:0002619,4.05e-18,17;UBERON:0000956,4.74e-17,21;UBERON:0001869,4.74e-17,21;UBERON:0000203,4.74e-17,21;UBERON:0010314,1.28e-16,92;UBERON:0002950,6.88e-13,4;UBERON:0001891,6.88e-13,4;UBERON:0009616,6.88e-13,4;UBERON:0010286,6.88e-13,4;UBERON:0000025,2.12e-12,114;UBERON:0004111,3.06e-11,122;UBERON:0004684,5.39e-10,3;UBERON:0002275,5.39e-10,3;UBERON:0002038,6.61e-10,3;UBERON:0009663,6.61e-10,3;UBERON:0009661,6.61e-10,3;UBERON:0000125,6.61e-10,3;UBERON:0002308,6.61e-10,3;UBERON:0003076,2.01e-08,12;UBERON:0003057,2.01e-08,12;UBERON:0011216,2.64e-08,194;UBERON:0004733,2.99e-08,6;UBERON:0004732,2.99e-08,6;UBERON:0002028,2.99e-08,6;UBERON:0007277,2.99e-08,6;UBERON:0001896,2.15e-07,2;UBERON:0002298,2.15e-07,2;UBERON:0005290,2.15e-07,2;UBERON:0010096,2.15e-07,2|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.595303031057488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.257259436035947,0,0,0.202316460859598,0,0.633831403506179,0,0,0,0,0,0,0,0,0.135005938331691,0,1.42825492201902,0.220868540951614,0,0,0,11.0115880999389,4.59674417106676,3.5329502648936,0.395658863190582,0.457438218012048,0.52091337055676,5.30447698102624,4.50210088025344,4.43114918552749,0,0,0.372798891650601,0.151452386666368,0.0755715601067855,0,0,0,0,0,0,0.421333260395256,0,0,0,0,0,0,0,0,0,0,0,0,0.148442139064825,0,0,0.691846491768175,0.150722640552623,0,0,0,0,0,0,0,0,0,2.63502717310392,2.51336048176146,0,0,0,0,5.84183493678809,4.11750542536764,0.251308704225729,2.25971616249959,2.30143911597297,5.194701113989,5.353961681236,0,0,0,0.210441855886474,0.130120442962704,0,0.180062129805349,0,0,0,0,0.258703370739016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.52347938276953,0.308713837137853,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.195133647857799,0,0,0,0,0,0,0,0,0,0,5.61927064957272,5.15731421005694,0.163934945376675,0,0,0,0.646270193198397,0,0.222798674082394,0,0.404810701674894,0.292255857911312,0,2.24924921495265,0,0,0,0,0,0,0,0,0,0,0,0,0.356497378384721,0,0,0,0.680879211507576,0,0.129358683782755,0.214337035031592,0.532020700926821,0.356737635204141,0.987294123612726,1.8267896946876,0,0,0,0,0,0,0,0,0,5.56275906031529,0,0,0,0,0,0,0,0,0,0,0,0,0,0.209088296014469,0,0,0.165306911450672,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102710957164827,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.6942555278512,1.38097570952153,1.71868654031819,1.54667864109319,8.22099023724771,3.7769694869485,2.02506750069542,4.05289082901798,2.71885445390523,4.65984280576638,0,0,0,0,0,0,0,0,0,0,0.25347929989024,0,0.0936415074698824,0.192075457214608,0,0,0.115884325944855,0.192909220463705,0,0,0.342869252385415,0,0,0,0.188218760830661,0,0,0.263069711437843,0,0,0,0,0,0.154936841185966,0.192906610981141,0,0,0,0,0,0|short_description=p3@Ptprn}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:19275 | |||
|HGNC= | |||
|MCL_coexpression_id=1 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:A6MDD2,uniprot:Q3UTI6,uniprot:Q6NVE2 | |||
|association_with_transcript=-58bp_to_ENSMUST00000027404,NM_008985,uc007boq.1,uc007bor.1,uc011wnn.1_5end | |||
|cluster_id=chr1:75260841..75260850,- | |||
|description=CAGE_peak_3_at_Ptprn_5end | |||
|id=chr1:75260841..75260850,- | |||
|ontology_enrichment_celltype=CL:0000117!3.63e-09!23;CL:0000337!3.63e-09!23;CL:0000540!5.01e-09!33;CL:0000047!5.01e-09!33;CL:0000031!5.01e-09!33;CL:0000404!5.01e-09!33;CL:0000393!9.97e-08!39;CL:0000211!9.97e-08!39;CL:0002319!3.93e-07!43;CL:0000221!7.57e-07!44;CL:0000133!7.57e-07!44 | |||
|ontology_enrichment_celltype_v019_2=CL:0002610,5.39e-10,3;CL:0002614,6.61e-10,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!7.24e-36!75;UBERON:0001016!7.24e-36!75;UBERON:0000955!8.86e-35!50;UBERON:0006238!8.86e-35!50;UBERON:0001017!1.97e-34!73;UBERON:0005743!1.97e-34!73;UBERON:0002616!1.38e-33!49;UBERON:0001049!3.98e-32!52;UBERON:0005068!3.98e-32!52;UBERON:0006241!3.98e-32!52;UBERON:0007135!3.98e-32!52;UBERON:0002346!1.20e-30!71;UBERON:0003075!1.20e-30!71;UBERON:0007284!1.20e-30!71;UBERON:0000033!1.47e-30!63;UBERON:0004121!2.54e-30!102;UBERON:0000924!2.54e-30!102;UBERON:0006601!2.54e-30!102;UBERON:0003080!1.68e-26!40;UBERON:0003056!2.38e-25!49;UBERON:0002780!3.59e-25!39;UBERON:0001890!3.59e-25!39;UBERON:0006240!3.59e-25!39;UBERON:0007811!1.28e-19!86;UBERON:0002020!2.87e-18!34;UBERON:0002791!2.90e-17!29;UBERON:0003528!2.90e-17!29;UBERON:0001893!2.90e-17!29;UBERON:0000153!8.77e-17!94;UBERON:0002021!6.76e-13!10;UBERON:0000411!6.76e-13!10;UBERON:0001950!6.76e-13!10;UBERON:0002420!7.39e-10!8;UBERON:0007245!7.39e-10!8;UBERON:0010009!7.39e-10!8;UBERON:0010011!7.39e-10!8;UBERON:0000454!7.39e-10!8;UBERON:0000956!1.53e-09!21;UBERON:0001869!1.53e-09!21;UBERON:0000203!1.53e-09!21;UBERON:0002619!2.07e-09!17;UBERON:0002298!2.62e-09!6;UBERON:0000025!2.82e-09!114;UBERON:0001894!7.94e-09!10;UBERON:0006222!7.94e-09!10;UBERON:0004111!6.48e-08!122 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,7.49e-38,54;UBERON:0000955,2.91e-34,47;UBERON:0006238,2.91e-34,47;UBERON:0001049,2.28e-33,52;UBERON:0005068,2.28e-33,52;UBERON:0006241,2.28e-33,52;UBERON:0007135,2.28e-33,52;UBERON:0002616,3.38e-32,46;UBERON:0001017,2.57e-31,73;UBERON:0001016,2.44e-30,75;UBERON:0002021,1.35e-26,10;UBERON:0000411,1.35e-26,10;UBERON:0001950,1.35e-26,10;UBERON:0002346,3.73e-26,64;UBERON:0003075,3.73e-26,64;UBERON:0007284,3.73e-26,64;UBERON:0003080,3.70e-25,40;UBERON:0002780,5.77e-23,39;UBERON:0001890,5.77e-23,39;UBERON:0006240,5.77e-23,39;UBERON:0004121,8.13e-23,95;UBERON:0000924,8.13e-23,95;UBERON:0006601,8.13e-23,95;UBERON:0010371,2.69e-22,73;UBERON:0003528,3.72e-22,29;UBERON:0002791,3.72e-22,29;UBERON:0001893,3.72e-22,29;UBERON:0002020,8.07e-21,34;UBERON:0003056,9.37e-20,49;UBERON:0002619,4.05e-18,17;UBERON:0000956,4.74e-17,21;UBERON:0001869,4.74e-17,21;UBERON:0000203,4.74e-17,21;UBERON:0010314,1.28e-16,92;UBERON:0002950,6.88e-13,4;UBERON:0001891,6.88e-13,4;UBERON:0009616,6.88e-13,4;UBERON:0010286,6.88e-13,4;UBERON:0000025,2.12e-12,114;UBERON:0004111,3.06e-11,122;UBERON:0004684,5.39e-10,3;UBERON:0002275,5.39e-10,3;UBERON:0002038,6.61e-10,3;UBERON:0009663,6.61e-10,3;UBERON:0009661,6.61e-10,3;UBERON:0000125,6.61e-10,3;UBERON:0002308,6.61e-10,3;UBERON:0003076,2.01e-08,12;UBERON:0003057,2.01e-08,12;UBERON:0011216,2.64e-08,194;UBERON:0004733,2.99e-08,6;UBERON:0004732,2.99e-08,6;UBERON:0002028,2.99e-08,6;UBERON:0007277,2.99e-08,6;UBERON:0001896,2.15e-07,2;UBERON:0002298,2.15e-07,2;UBERON:0005290,2.15e-07,2;UBERON:0010096,2.15e-07,2 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.595303031057488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.257259436035947,0,0,0.202316460859598,0,0.633831403506179,0,0,0,0,0,0,0,0,0.135005938331691,0,1.42825492201902,0.220868540951614,0,0,0,11.0115880999389,4.59674417106676,3.5329502648936,0.395658863190582,0.457438218012048,0.52091337055676,5.30447698102624,4.50210088025344,4.43114918552749,0,0,0.372798891650601,0.151452386666368,0.0755715601067855,0,0,0,0,0,0,0.421333260395256,0,0,0,0,0,0,0,0,0,0,0,0,0.148442139064825,0,0,0.691846491768175,0.150722640552623,0,0,0,0,0,0,0,0,0,2.63502717310392,2.51336048176146,0,0,0,0,5.84183493678809,4.11750542536764,0.251308704225729,2.25971616249959,2.30143911597297,5.194701113989,5.353961681236,0,0,0,0.210441855886474,0.130120442962704,0,0.180062129805349,0,0,0,0,0.258703370739016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.52347938276953,0.308713837137853,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.195133647857799,0,0,0,0,0,0,0,0,0,0,5.61927064957272,5.15731421005694,0.163934945376675,0,0,0,0.646270193198397,0,0.222798674082394,0,0.404810701674894,0.292255857911312,0,2.24924921495265,0,0,0,0,0,0,0,0,0,0,0,0,0.356497378384721,0,0,0,0.680879211507576,0,0.129358683782755,0.214337035031592,0.532020700926821,0.356737635204141,0.987294123612726,1.8267896946876,0,0,0,0,0,0,0,0,0,5.56275906031529,0,0,0,0,0,0,0,0,0,0,0,0,0,0.209088296014469,0,0,0.165306911450672,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102710957164827,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.6942555278512,1.38097570952153,1.71868654031819,1.54667864109319,8.22099023724771,3.7769694869485,2.02506750069542,4.05289082901798,2.71885445390523,4.65984280576638,0,0,0,0,0,0,0,0,0,0,0.25347929989024,0,0.0936415074698824,0.192075457214608,0,0,0.115884325944855,0.192909220463705,0,0,0.342869252385415,0,0,0,0.188218760830661,0,0,0.263069711437843,0,0,0,0,0,0.154936841185966,0.192906610981141,0,0,0,0,0,0 | |||
|short_description=p3@Ptprn | |||
}} |
Revision as of 00:51, 6 August 2015
Short description: | p3@Ptprn |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Ptprn_5end |
Coexpression cluster: | MCL_coexpression_mm9:1 |
Association with transcript: | -58bp_to_ENSMUST00000027404, NM_008985, uc007boq.1, uc007bor.1, uc011wnn.1_5end |
EntrezGene: | 19275 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
raphe nuclei neuron | 5.39e-10 | 3 |
neuron of the substantia nigra | 6.61e-10 | 3 |