FFCP PHASE1:Mm9::chr16:20621282..20621302,-: Difference between revisions
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{{FFCP|EntrezGene=73047|HGNC=|MCL_coexpression_id=20|UniProt=B2RXL5,Q78WH7|association_with_transcript=48bp_to_NM_028420,uc007yqk.2_5end|description=CAGE_peak_6_at_Camk2n2_5end|id=chr16:20621282..20621302,-|ontology_enrichment_celltype=CL:0000221!2.35e-12!44;CL:0000133!2.35e-12!44;CL:0002319!2.63e-12!43;CL:0000117!4.40e-12!23;CL:0000337!4.40e-12!23;CL:0000540!1.39e-10!33;CL:0000047!1.39e-10!33;CL:0000031!1.39e-10!33;CL:0000404!1.39e-10!33;CL:0000055!1.62e-08!50;CL:0000393!3.49e-07!39;CL:0000211!3.49e-07!39|ontology_enrichment_celltype_v019_2=CL:0000117,5.92e-18,23;CL:0000337,5.92e-18,23;CL:0002319,3.95e-12,43;CL:0000221,1.01e-11,44;CL:0000133,1.01e-11,44;CL:0000540,4.70e-11,33;CL:0000047,4.70e-11,33;CL:0000031,4.70e-11,33;CL:0000404,4.70e-11,33;CL:0000393,1.19e-08,39;CL:0000211,1.19e-08,39|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000073!1.99e-26!75;UBERON:0001016!1.99e-26!75;UBERON:0001017!5.69e-26!73;UBERON:0005743!5.69e-26!73;UBERON:0002346!6.04e-25!71;UBERON:0003075!6.04e-25!71;UBERON:0007284!6.04e-25!71;UBERON:0004121!1.43e-24!102;UBERON:0000924!1.43e-24!102;UBERON:0006601!1.43e-24!102;UBERON:0001049!9.68e-22!52;UBERON:0005068!9.68e-22!52;UBERON:0006241!9.68e-22!52;UBERON:0007135!9.68e-22!52;UBERON:0000033!2.20e-20!63;UBERON:0000955!2.85e-20!50;UBERON:0006238!2.85e-20!50;UBERON:0002616!1.21e-19!49;UBERON:0003056!9.38e-17!49;UBERON:0002020!1.23e-16!34;UBERON:0003080!1.63e-14!40;UBERON:0002780!8.81e-14!39;UBERON:0001890!8.81e-14!39;UBERON:0006240!8.81e-14!39;UBERON:0002791!4.20e-13!29;UBERON:0003528!4.20e-13!29;UBERON:0001893!4.20e-13!29;UBERON:0007811!5.04e-10!86;UBERON:0003076!3.64e-08!12;UBERON:0003057!3.64e-08!12;UBERON:0000153!3.79e-08!94;UBERON:0000956!4.82e-08!21;UBERON:0001869!4.82e-08!21;UBERON:0000203!4.82e-08!21;UBERON:0002619!4.11e-07!17|ontology_enrichment_uberon_v019_2=UBERON:0000073,3.84e-44,54;UBERON:0001017,4.68e-41,73;UBERON:0001049,1.01e-40,52;UBERON:0005068,1.01e-40,52;UBERON:0006241,1.01e-40,52;UBERON:0007135,1.01e-40,52;UBERON:0001016,1.23e-39,75;UBERON:0002346,1.05e-32,64;UBERON:0003075,1.05e-32,64;UBERON:0007284,1.05e-32,64;UBERON:0000955,1.06e-32,47;UBERON:0006238,1.06e-32,47;UBERON:0002616,2.01e-31,46;UBERON:0004121,4.30e-30,95;UBERON:0000924,4.30e-30,95;UBERON:0006601,4.30e-30,95;UBERON:0002020,2.00e-28,34;UBERON:0010371,2.58e-27,73;UBERON:0003080,7.08e-25,40;UBERON:0002780,2.22e-23,39;UBERON:0001890,2.22e-23,39;UBERON:0006240,2.22e-23,39;UBERON:0003528,3.65e-21,29;UBERON:0002791,3.65e-21,29;UBERON:0001893,3.65e-21,29;UBERON:0010314,1.22e-20,92;UBERON:0003056,2.81e-20,49;UBERON:0003076,1.02e-16,12;UBERON:0003057,1.02e-16,12;UBERON:0000025,9.07e-13,114;UBERON:0002420,1.13e-12,8;UBERON:0007245,1.13e-12,8;UBERON:0010009,1.13e-12,8;UBERON:0010011,1.13e-12,8;UBERON:0000454,1.13e-12,8;UBERON:0002619,2.12e-12,17;UBERON:0004111,5.06e-12,122;UBERON:0002021,2.94e-11,10;UBERON:0000411,2.94e-11,10;UBERON:0001950,2.94e-11,10;UBERON:0000956,4.56e-11,21;UBERON:0001869,4.56e-11,21;UBERON:0000203,4.56e-11,21;UBERON:0002240,1.06e-10,6;UBERON:0005174,1.06e-10,6;UBERON:0001137,1.06e-10,6;UBERON:0001948,5.37e-09,5;UBERON:0002315,5.37e-09,5;UBERON:0000369,4.33e-08,5;UBERON:0002435,4.33e-08,5;UBERON:0000204,4.33e-08,5;UBERON:0010082,4.33e-08,5;UBERON:0011216,6.45e-08,194;UBERON:0002950,7.76e-08,4;UBERON:0001891,7.76e-08,4;UBERON:0009616,7.76e-08,4;UBERON:0010286,7.76e-08,4;UBERON:0004733,1.13e-07,6;UBERON:0004732,1.13e-07,6;UBERON:0002028,1.13e-07,6;UBERON:0007277,1.13e-07,6|phase1_expression=0,0,0,0,0,0,0.233612640595526,0,0,0,0,0,0,0,0,0,0,0,0,0,1.61582251287033,0.0992909512008853,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.47673941043627,0,2.63623419281366,2.13872888981712,0.699932108126813,0,0,0,0,0,0,0,2.02316460859598,1.05798195854407,2.53532561402472,0,0.889294796111139,0.449949858640699,0,0,2.09720077362883,0.384218305321555,0.207379224616955,0.540023753326763,0.630974884054146,12.8542942981712,10.8225585066291,0.244981598429908,0.670918297127655,0,14.3150645299205,18.5146640223522,12.7493422602682,3.69281605644543,5.39777097254217,5.73004707612436,12.8424179540635,9.00420176050688,8.55670187550137,8.83885756421003,7.54569908235246,3.91438836233131,0.302904773332736,0.604572480854284,0.579728977403356,0,0.679971333707751,0,0,0,0.561777680527007,2.04516387093669,1.55871602761721,1.41335829804136,0.281686839553361,0,0,0,0.216491041011214,0,0,0.45673551887624,0,1.63286352971307,0,0.304465478312141,0.691846491768175,0.60289056221049,0.940709657085638,0,0,0.289198713839823,0,0,0,0.484875253135222,0,7.61230072230023,13.4045892360611,0.255457055208591,0,0,0.127070227073065,13.481157546434,7.32000964509802,1.50785222535437,2.08589184230732,2.81287003063364,19.5320761885986,11.0324058886075,0.101839363850316,0.124406970610093,0,0.631325567659422,0.260240885925407,0.689706313300419,0.720248519221397,0.150704817835715,0.612328492361951,0.512454881139399,0.468508622798644,1.03481348295606,0.215567992932842,0,0.175951124163949,0,0,0,0,0,0,0,0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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:73047 | |||
|HGNC= | |||
|MCL_coexpression_id=20 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:B2RXL5,uniprot:Q78WH7 | |||
|association_with_transcript=48bp_to_NM_028420,uc007yqk.2_5end | |||
|cluster_id=chr16:20621282..20621302,- | |||
|description=CAGE_peak_6_at_Camk2n2_5end | |||
|id=chr16:20621282..20621302,- | |||
|ontology_enrichment_celltype=CL:0000221!2.35e-12!44;CL:0000133!2.35e-12!44;CL:0002319!2.63e-12!43;CL:0000117!4.40e-12!23;CL:0000337!4.40e-12!23;CL:0000540!1.39e-10!33;CL:0000047!1.39e-10!33;CL:0000031!1.39e-10!33;CL:0000404!1.39e-10!33;CL:0000055!1.62e-08!50;CL:0000393!3.49e-07!39;CL:0000211!3.49e-07!39 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,5.92e-18,23;CL:0000337,5.92e-18,23;CL:0002319,3.95e-12,43;CL:0000221,1.01e-11,44;CL:0000133,1.01e-11,44;CL:0000540,4.70e-11,33;CL:0000047,4.70e-11,33;CL:0000031,4.70e-11,33;CL:0000404,4.70e-11,33;CL:0000393,1.19e-08,39;CL:0000211,1.19e-08,39 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!1.99e-26!75;UBERON:0001016!1.99e-26!75;UBERON:0001017!5.69e-26!73;UBERON:0005743!5.69e-26!73;UBERON:0002346!6.04e-25!71;UBERON:0003075!6.04e-25!71;UBERON:0007284!6.04e-25!71;UBERON:0004121!1.43e-24!102;UBERON:0000924!1.43e-24!102;UBERON:0006601!1.43e-24!102;UBERON:0001049!9.68e-22!52;UBERON:0005068!9.68e-22!52;UBERON:0006241!9.68e-22!52;UBERON:0007135!9.68e-22!52;UBERON:0000033!2.20e-20!63;UBERON:0000955!2.85e-20!50;UBERON:0006238!2.85e-20!50;UBERON:0002616!1.21e-19!49;UBERON:0003056!9.38e-17!49;UBERON:0002020!1.23e-16!34;UBERON:0003080!1.63e-14!40;UBERON:0002780!8.81e-14!39;UBERON:0001890!8.81e-14!39;UBERON:0006240!8.81e-14!39;UBERON:0002791!4.20e-13!29;UBERON:0003528!4.20e-13!29;UBERON:0001893!4.20e-13!29;UBERON:0007811!5.04e-10!86;UBERON:0003076!3.64e-08!12;UBERON:0003057!3.64e-08!12;UBERON:0000153!3.79e-08!94;UBERON:0000956!4.82e-08!21;UBERON:0001869!4.82e-08!21;UBERON:0000203!4.82e-08!21;UBERON:0002619!4.11e-07!17 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,3.84e-44,54;UBERON:0001017,4.68e-41,73;UBERON:0001049,1.01e-40,52;UBERON:0005068,1.01e-40,52;UBERON:0006241,1.01e-40,52;UBERON:0007135,1.01e-40,52;UBERON:0001016,1.23e-39,75;UBERON:0002346,1.05e-32,64;UBERON:0003075,1.05e-32,64;UBERON:0007284,1.05e-32,64;UBERON:0000955,1.06e-32,47;UBERON:0006238,1.06e-32,47;UBERON:0002616,2.01e-31,46;UBERON:0004121,4.30e-30,95;UBERON:0000924,4.30e-30,95;UBERON:0006601,4.30e-30,95;UBERON:0002020,2.00e-28,34;UBERON:0010371,2.58e-27,73;UBERON:0003080,7.08e-25,40;UBERON:0002780,2.22e-23,39;UBERON:0001890,2.22e-23,39;UBERON:0006240,2.22e-23,39;UBERON:0003528,3.65e-21,29;UBERON:0002791,3.65e-21,29;UBERON:0001893,3.65e-21,29;UBERON:0010314,1.22e-20,92;UBERON:0003056,2.81e-20,49;UBERON:0003076,1.02e-16,12;UBERON:0003057,1.02e-16,12;UBERON:0000025,9.07e-13,114;UBERON:0002420,1.13e-12,8;UBERON:0007245,1.13e-12,8;UBERON:0010009,1.13e-12,8;UBERON:0010011,1.13e-12,8;UBERON:0000454,1.13e-12,8;UBERON:0002619,2.12e-12,17;UBERON:0004111,5.06e-12,122;UBERON:0002021,2.94e-11,10;UBERON:0000411,2.94e-11,10;UBERON:0001950,2.94e-11,10;UBERON:0000956,4.56e-11,21;UBERON:0001869,4.56e-11,21;UBERON:0000203,4.56e-11,21;UBERON:0002240,1.06e-10,6;UBERON:0005174,1.06e-10,6;UBERON:0001137,1.06e-10,6;UBERON:0001948,5.37e-09,5;UBERON:0002315,5.37e-09,5;UBERON:0000369,4.33e-08,5;UBERON:0002435,4.33e-08,5;UBERON:0000204,4.33e-08,5;UBERON:0010082,4.33e-08,5;UBERON:0011216,6.45e-08,194;UBERON:0002950,7.76e-08,4;UBERON:0001891,7.76e-08,4;UBERON:0009616,7.76e-08,4;UBERON:0010286,7.76e-08,4;UBERON:0004733,1.13e-07,6;UBERON:0004732,1.13e-07,6;UBERON:0002028,1.13e-07,6;UBERON:0007277,1.13e-07,6 | |||
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|short_description=p6@Camk2n2 | |||
}} |
Revision as of 04:03, 6 August 2015
Short description: | p6@Camk2n2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_6_at_Camk2n2_5end |
Coexpression cluster: | MCL_coexpression_mm9:20 |
Association with transcript: | 48bp_to_NM_028420, uc007yqk.2_5end |
EntrezGene: | 73047 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 5.92e-18 | 23 |
neuroblast (sensu Vertebrata) | 5.92e-18 | 23 |
neural cell | 3.95e-12 | 43 |
ectodermal cell | 1.01e-11 | 44 |
neurectodermal cell | 1.01e-11 | 44 |
neuron | 4.70e-11 | 33 |
neuronal stem cell | 4.70e-11 | 33 |
neuroblast | 4.70e-11 | 33 |
electrically signaling cell | 4.70e-11 | 33 |
electrically responsive cell | 1.19e-08 | 39 |
electrically active cell | 1.19e-08 | 39 |