FFCP PHASE1:Mm9::chr3:146433182..146433215,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|EntrezGene=18749|HGNC=|MCL_coexpression_id=2|UniProt=P68181,P05132|association_with_transcript=0bp_to_NM_001164198,uc008rrs.2_5end|description=CAGE_peak_10_at_Prkacb_5end|id=chr3:146433182..146433215,-|ontology_enrichment_celltype=CL:0000117!1.17e-16!23;CL:0000337!1.17e-16!23;CL:0000540!4.95e-10!33;CL:0000047!4.95e-10!33;CL:0000031!4.95e-10!33;CL:0000404!4.95e-10!33;CL:0000393!9.36e-08!39;CL:0000211!9.36e-08!39|ontology_enrichment_celltype_v019_2=CL:0000117,1.48e-24,23;CL:0000337,1.48e-24,23;CL:0000540,6.88e-15,33;CL:0000047,6.88e-15,33;CL:0000031,6.88e-15,33;CL:0000404,6.88e-15,33;CL:0000393,1.57e-11,39;CL:0000211,1.57e-11,39;CL:0002319,7.75e-10,43;CL:0000221,1.83e-09,44;CL:0000133,1.83e-09,44;CL:0002609,9.97e-07,6|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001049!1.38e-27!52;UBERON:0005068!1.38e-27!52;UBERON:0006241!1.38e-27!52;UBERON:0007135!1.38e-27!52;UBERON:0000955!1.81e-26!50;UBERON:0006238!1.81e-26!50;UBERON:0002346!2.43e-26!71;UBERON:0003075!2.43e-26!71;UBERON:0007284!2.43e-26!71;UBERON:0002616!1.23e-25!49;UBERON:0000033!1.66e-25!63;UBERON:0001017!6.65e-24!73;UBERON:0005743!6.65e-24!73;UBERON:0000073!2.38e-23!75;UBERON:0001016!2.38e-23!75;UBERON:0002020!3.88e-23!34;UBERON:0003056!1.54e-22!49;UBERON:0003080!3.62e-22!40;UBERON:0002780!2.52e-21!39;UBERON:0001890!2.52e-21!39;UBERON:0006240!2.52e-21!39;UBERON:0004121!6.78e-20!102;UBERON:0000924!6.78e-20!102;UBERON:0006601!6.78e-20!102;UBERON:0002791!1.48e-19!29;UBERON:0003528!1.48e-19!29;UBERON:0001893!1.48e-19!29;UBERON:0000956!1.77e-13!21;UBERON:0001869!1.77e-13!21;UBERON:0000203!1.77e-13!21;UBERON:0007811!5.00e-13!86;UBERON:0002619!6.86e-11!17;UBERON:0000153!2.62e-10!94;UBERON:0002021!3.49e-10!10;UBERON:0000411!3.49e-10!10;UBERON:0001950!3.49e-10!10;UBERON:0002420!2.58e-07!8;UBERON:0007245!2.58e-07!8;UBERON:0010009!2.58e-07!8;UBERON:0010011!2.58e-07!8;UBERON:0000454!2.58e-07!8|ontology_enrichment_uberon_v019_2=UBERON:0000073,2.61e-36,54;UBERON:0002020,2.92e-35,34;UBERON:0001049,1.18e-33,52;UBERON:0005068,1.18e-33,52;UBERON:0006241,1.18e-33,52;UBERON:0007135,1.18e-33,52;UBERON:0001017,5.19e-31,73;UBERON:0001016,8.75e-30,75;UBERON:0003528,8.99e-30,29;UBERON:0002791,8.99e-30,29;UBERON:0001893,8.99e-30,29;UBERON:0000955,2.28e-28,47;UBERON:0006238,2.28e-28,47;UBERON:0002346,1.62e-27,64;UBERON:0003075,1.62e-27,64;UBERON:0007284,1.62e-27,64;UBERON:0002616,3.34e-27,46;UBERON:0003080,7.27e-25,40;UBERON:0002780,1.13e-23,39;UBERON:0001890,1.13e-23,39;UBERON:0006240,1.13e-23,39;UBERON:0010371,1.82e-22,73;UBERON:0004121,1.88e-22,95;UBERON:0000924,1.88e-22,95;UBERON:0006601,1.88e-22,95;UBERON:0003056,5.62e-21,49;UBERON:0000956,1.87e-20,21;UBERON:0001869,1.87e-20,21;UBERON:0000203,1.87e-20,21;UBERON:0002619,1.69e-16,17;UBERON:0010314,3.91e-15,92;UBERON:0002021,1.10e-14,10;UBERON:0000411,1.10e-14,10;UBERON:0001950,1.10e-14,10;UBERON:0002420,2.52e-10,8;UBERON:0007245,2.52e-10,8;UBERON:0010009,2.52e-10,8;UBERON:0010011,2.52e-10,8;UBERON:0000454,2.52e-10,8;UBERON:0003076,5.59e-09,12;UBERON:0003057,5.59e-09,12;UBERON:0000025,1.26e-08,114;UBERON:0002240,1.80e-07,6;UBERON:0005174,1.80e-07,6;UBERON:0001137,1.80e-07,6;UBERON:0004111,2.43e-07,122;UBERON:0000369,3.84e-07,5;UBERON:0002435,3.84e-07,5;UBERON:0000204,3.84e-07,5;UBERON:0010082,3.84e-07,5|phase1_expression=0.160148847104794,0,0,0,0,0.16787927191189,0,0,0,0,0,0,0,0,0,0.202475267389826,0,0,0,0.42438965179803,4.84746753861098,0,0,0,0,0,0,0,0,0.252030129759931,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.515672092277442,5.86717736492834,8.99284664762456,3.1691570175309,0,0,0,0,0,0,0,4.04389488003063,5.26523159493594,3.57552434297349,5.71301968807607,5.96345060569357,5.14461356702807,4.69642807989358,7.35375029288017,12.1127469099328,13.0241084846891,14.2854075928306,6.3305418110493,9.88066550906024,9.37644067002168,7.53794097303729,10.1297269805702,10.5430790965999,8.83885756421003,10.2507610175354,8.94717339961443,0.151452386666368,0,0,0,0,0,0,0,0.421333260395256,0,0,0,0.14084341977668,0,0,0,0,0,0,0.91347103775248,0,0.148442139064825,0.173485326766136,0,0.461230994512117,0.301445281105245,0.823120949949934,0,0,0,0,0,0,0,0,4.9772735491963,9.84399522023239,0,0,0,0,15.8778077769112,19.2150253183823,30.0313901549746,28.3333641913411,41.1701886301832,14.1295870300501,21.415846724944,0,0,0,0.631325567659422,0,0,0.180062129805349,0.452114453507145,1.02054748726992,0.640568601424249,0.843315521037559,1.81092359517311,0,0,0,0,0,0,0,0,0,0,0,0.207125772535502,0,0,0,0,0.308534225774757,0.232533944750408,0.268273401399619,0,0,0.164167464079095,0,0,0,0,8.83217783969334,8.95270127699774,0,0,0,0.232236671860439,0,0,0,0.190225626112559,0,0.164698954724011,0,0,0.19496408711912,0,0,0.199141273254367,0,0,0,0.203651327845314,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.195133647857799,0,0,0,0,0,0,0,0,0,0,6.90367536947505,7.14991288212439,0,0,0,0,0.215423397732799,0,0,0,0,0,0,10.6036034419196,0,0,0.162886959353576,0,0,0,0,0.565815239267694,0.590603785761546,0,0.258428293168221,0.727067458955011,0,0.316036757935816,0,0,0,0.18006109403131,0.258717367565509,0.428674070063185,0.532020700926821,0.535106452806212,0.658196082408484,0.304464949114599,0,0,0,0,0,0,0,0,0,7.78786268444141,0,0.206386867963223,0,0,0,0,0,0,0,0.954670618015114,0,0.203319467126849,0.432021363287205,0.209088296014469,0.218362563746178,0.674321731924103,0.495920734352016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183151624267265,0,0,46.8744029372165,45.5721984142105,44.6858500482729,50.8685419737315,21.2375581128899,20.3956352295219,27.675922509504,25.6683085837806,27.6416869480365,23.2992140288319,0.103787347584177,0.399024873401031,0.853668028770671,0.486213434136588,1.25767897576789,1.2869045591501,0.888986911206461,1.85431551515005,0.962757628775446,1.01078884705519,1.52087579934144,1.69763707247469,2.34103768674706,2.17685518176556,2.12511235135769,0.952587382566147,1.0429589335037,1.92909220463705,2.06042950401653,2.06078488188156,0.685738504770831,2.12970967391205,1.43061713968393,2.90692833264657,1.78807822789128,2.5384382367503,1.46342378298218,1.31534855718921,2.17286582153379,0,1.66089025373844,1.0835493061312,0,1.70430525304563,1.54325288784913,1.74867404556562,1.40358965067245,0.859484216193193,0.191288332068843,0.661774257358546,0|short_description=p10@Prkacb}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:18749 | |||
|HGNC= | |||
|MCL_coexpression_id=2 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:P68181,uniprot:P05132 | |||
|association_with_transcript=0bp_to_NM_001164198,uc008rrs.2_5end | |||
|cluster_id=chr3:146433182..146433215,- | |||
|description=CAGE_peak_10_at_Prkacb_5end | |||
|id=chr3:146433182..146433215,- | |||
|ontology_enrichment_celltype=CL:0000117!1.17e-16!23;CL:0000337!1.17e-16!23;CL:0000540!4.95e-10!33;CL:0000047!4.95e-10!33;CL:0000031!4.95e-10!33;CL:0000404!4.95e-10!33;CL:0000393!9.36e-08!39;CL:0000211!9.36e-08!39 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,1.48e-24,23;CL:0000337,1.48e-24,23;CL:0000540,6.88e-15,33;CL:0000047,6.88e-15,33;CL:0000031,6.88e-15,33;CL:0000404,6.88e-15,33;CL:0000393,1.57e-11,39;CL:0000211,1.57e-11,39;CL:0002319,7.75e-10,43;CL:0000221,1.83e-09,44;CL:0000133,1.83e-09,44;CL:0002609,9.97e-07,6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!1.38e-27!52;UBERON:0005068!1.38e-27!52;UBERON:0006241!1.38e-27!52;UBERON:0007135!1.38e-27!52;UBERON:0000955!1.81e-26!50;UBERON:0006238!1.81e-26!50;UBERON:0002346!2.43e-26!71;UBERON:0003075!2.43e-26!71;UBERON:0007284!2.43e-26!71;UBERON:0002616!1.23e-25!49;UBERON:0000033!1.66e-25!63;UBERON:0001017!6.65e-24!73;UBERON:0005743!6.65e-24!73;UBERON:0000073!2.38e-23!75;UBERON:0001016!2.38e-23!75;UBERON:0002020!3.88e-23!34;UBERON:0003056!1.54e-22!49;UBERON:0003080!3.62e-22!40;UBERON:0002780!2.52e-21!39;UBERON:0001890!2.52e-21!39;UBERON:0006240!2.52e-21!39;UBERON:0004121!6.78e-20!102;UBERON:0000924!6.78e-20!102;UBERON:0006601!6.78e-20!102;UBERON:0002791!1.48e-19!29;UBERON:0003528!1.48e-19!29;UBERON:0001893!1.48e-19!29;UBERON:0000956!1.77e-13!21;UBERON:0001869!1.77e-13!21;UBERON:0000203!1.77e-13!21;UBERON:0007811!5.00e-13!86;UBERON:0002619!6.86e-11!17;UBERON:0000153!2.62e-10!94;UBERON:0002021!3.49e-10!10;UBERON:0000411!3.49e-10!10;UBERON:0001950!3.49e-10!10;UBERON:0002420!2.58e-07!8;UBERON:0007245!2.58e-07!8;UBERON:0010009!2.58e-07!8;UBERON:0010011!2.58e-07!8;UBERON:0000454!2.58e-07!8 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,2.61e-36,54;UBERON:0002020,2.92e-35,34;UBERON:0001049,1.18e-33,52;UBERON:0005068,1.18e-33,52;UBERON:0006241,1.18e-33,52;UBERON:0007135,1.18e-33,52;UBERON:0001017,5.19e-31,73;UBERON:0001016,8.75e-30,75;UBERON:0003528,8.99e-30,29;UBERON:0002791,8.99e-30,29;UBERON:0001893,8.99e-30,29;UBERON:0000955,2.28e-28,47;UBERON:0006238,2.28e-28,47;UBERON:0002346,1.62e-27,64;UBERON:0003075,1.62e-27,64;UBERON:0007284,1.62e-27,64;UBERON:0002616,3.34e-27,46;UBERON:0003080,7.27e-25,40;UBERON:0002780,1.13e-23,39;UBERON:0001890,1.13e-23,39;UBERON:0006240,1.13e-23,39;UBERON:0010371,1.82e-22,73;UBERON:0004121,1.88e-22,95;UBERON:0000924,1.88e-22,95;UBERON:0006601,1.88e-22,95;UBERON:0003056,5.62e-21,49;UBERON:0000956,1.87e-20,21;UBERON:0001869,1.87e-20,21;UBERON:0000203,1.87e-20,21;UBERON:0002619,1.69e-16,17;UBERON:0010314,3.91e-15,92;UBERON:0002021,1.10e-14,10;UBERON:0000411,1.10e-14,10;UBERON:0001950,1.10e-14,10;UBERON:0002420,2.52e-10,8;UBERON:0007245,2.52e-10,8;UBERON:0010009,2.52e-10,8;UBERON:0010011,2.52e-10,8;UBERON:0000454,2.52e-10,8;UBERON:0003076,5.59e-09,12;UBERON:0003057,5.59e-09,12;UBERON:0000025,1.26e-08,114;UBERON:0002240,1.80e-07,6;UBERON:0005174,1.80e-07,6;UBERON:0001137,1.80e-07,6;UBERON:0004111,2.43e-07,122;UBERON:0000369,3.84e-07,5;UBERON:0002435,3.84e-07,5;UBERON:0000204,3.84e-07,5;UBERON:0010082,3.84e-07,5 | |||
|phase1_expression=0.160148847104794,0,0,0,0,0.16787927191189,0,0,0,0,0,0,0,0,0,0.202475267389826,0,0,0,0.42438965179803,4.84746753861098,0,0,0,0,0,0,0,0,0.252030129759931,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.515672092277442,5.86717736492834,8.99284664762456,3.1691570175309,0,0,0,0,0,0,0,4.04389488003063,5.26523159493594,3.57552434297349,5.71301968807607,5.96345060569357,5.14461356702807,4.69642807989358,7.35375029288017,12.1127469099328,13.0241084846891,14.2854075928306,6.3305418110493,9.88066550906024,9.37644067002168,7.53794097303729,10.1297269805702,10.5430790965999,8.83885756421003,10.2507610175354,8.94717339961443,0.151452386666368,0,0,0,0,0,0,0,0.421333260395256,0,0,0,0.14084341977668,0,0,0,0,0,0,0.91347103775248,0,0.148442139064825,0.173485326766136,0,0.461230994512117,0.301445281105245,0.823120949949934,0,0,0,0,0,0,0,0,4.9772735491963,9.84399522023239,0,0,0,0,15.8778077769112,19.2150253183823,30.0313901549746,28.3333641913411,41.1701886301832,14.1295870300501,21.415846724944,0,0,0,0.631325567659422,0,0,0.180062129805349,0.452114453507145,1.02054748726992,0.640568601424249,0.843315521037559,1.81092359517311,0,0,0,0,0,0,0,0,0,0,0,0.207125772535502,0,0,0,0,0.308534225774757,0.232533944750408,0.268273401399619,0,0,0.164167464079095,0,0,0,0,8.83217783969334,8.95270127699774,0,0,0,0.232236671860439,0,0,0,0.190225626112559,0,0.164698954724011,0,0,0.19496408711912,0,0,0.199141273254367,0,0,0,0.203651327845314,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.195133647857799,0,0,0,0,0,0,0,0,0,0,6.90367536947505,7.14991288212439,0,0,0,0,0.215423397732799,0,0,0,0,0,0,10.6036034419196,0,0,0.162886959353576,0,0,0,0,0.565815239267694,0.590603785761546,0,0.258428293168221,0.727067458955011,0,0.316036757935816,0,0,0,0.18006109403131,0.258717367565509,0.428674070063185,0.532020700926821,0.535106452806212,0.658196082408484,0.304464949114599,0,0,0,0,0,0,0,0,0,7.78786268444141,0,0.206386867963223,0,0,0,0,0,0,0,0.954670618015114,0,0.203319467126849,0.432021363287205,0.209088296014469,0.218362563746178,0.674321731924103,0.495920734352016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183151624267265,0,0,46.8744029372165,45.5721984142105,44.6858500482729,50.8685419737315,21.2375581128899,20.3956352295219,27.675922509504,25.6683085837806,27.6416869480365,23.2992140288319,0.103787347584177,0.399024873401031,0.853668028770671,0.486213434136588,1.25767897576789,1.2869045591501,0.888986911206461,1.85431551515005,0.962757628775446,1.01078884705519,1.52087579934144,1.69763707247469,2.34103768674706,2.17685518176556,2.12511235135769,0.952587382566147,1.0429589335037,1.92909220463705,2.06042950401653,2.06078488188156,0.685738504770831,2.12970967391205,1.43061713968393,2.90692833264657,1.78807822789128,2.5384382367503,1.46342378298218,1.31534855718921,2.17286582153379,0,1.66089025373844,1.0835493061312,0,1.70430525304563,1.54325288784913,1.74867404556562,1.40358965067245,0.859484216193193,0.191288332068843,0.661774257358546,0 | |||
|short_description=p10@Prkacb | |||
}} |
Revision as of 05:07, 6 August 2015
Short description: | p10@Prkacb |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_10_at_Prkacb_5end |
Coexpression cluster: | MCL_coexpression_mm9:2 |
Association with transcript: | 0bp_to_NM_001164198, uc008rrs.2_5end |
EntrezGene: | 18749 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 1.48e-24 | 23 |
neuroblast (sensu Vertebrata) | 1.48e-24 | 23 |
neuron | 6.88e-15 | 33 |
neuronal stem cell | 6.88e-15 | 33 |
neuroblast | 6.88e-15 | 33 |
electrically signaling cell | 6.88e-15 | 33 |
electrically responsive cell | 1.57e-11 | 39 |
electrically active cell | 1.57e-11 | 39 |
neural cell | 7.75e-10 | 43 |
ectodermal cell | 1.83e-09 | 44 |
neurectodermal cell | 1.83e-09 | 44 |
neuron of cerebral cortex | 9.97e-07 | 6 |