FFCP PHASE1:Mm9::chr16:41533415..41533438,+: Difference between revisions
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{{FFCP|EntrezGene=268890|HGNC=|MCL_coexpression_id=1|UniProt=Q8BLK3|association_with_transcript=-16bp_to_NM_175548,uc007zfs.1,uc007zft.1_5end|description=CAGE_peak_4_at_Lsamp_5end|id=chr16:41533415..41533438,+|ontology_enrichment_celltype=CL:0000117!8.68e-08!23;CL:0000337!8.68e-08!23;CL:0000221!2.12e-07!44;CL:0000133!2.12e-07!44;CL:0002319!5.50e-07!43|ontology_enrichment_celltype_v019_2=CL:0000117,3.15e-09,23;CL:0000337,3.15e-09,23|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004121!6.42e-27!102;UBERON:0000924!6.42e-27!102;UBERON:0006601!6.42e-27!102;UBERON:0000033!1.07e-23!63;UBERON:0001017!1.05e-22!73;UBERON:0005743!1.05e-22!73;UBERON:0000073!8.15e-22!75;UBERON:0001016!8.15e-22!75;UBERON:0002346!1.48e-21!71;UBERON:0003075!1.48e-21!71;UBERON:0007284!1.48e-21!71;UBERON:0001049!5.26e-19!52;UBERON:0005068!5.26e-19!52;UBERON:0006241!5.26e-19!52;UBERON:0007135!5.26e-19!52;UBERON:0000955!5.39e-18!50;UBERON:0006238!5.39e-18!50;UBERON:0002616!1.97e-17!49;UBERON:0003056!1.46e-16!49;UBERON:0002020!7.87e-13!34;UBERON:0000153!8.99e-13!94;UBERON:0003080!9.72e-13!40;UBERON:0002780!4.49e-12!39;UBERON:0001890!4.49e-12!39;UBERON:0006240!4.49e-12!39;UBERON:0007811!1.12e-11!86;UBERON:0002791!3.38e-10!29;UBERON:0003528!3.38e-10!29;UBERON:0001893!3.38e-10!29;UBERON:0000468!7.63e-08!333;UBERON:0002021!1.02e-07!10;UBERON:0000411!1.02e-07!10;UBERON:0001950!1.02e-07!10;UBERON:0003076!2.69e-07!12;UBERON:0003057!2.69e-07!12|ontology_enrichment_uberon_v019_2=UBERON:0004121,4.05e-26,95;UBERON:0000924,4.05e-26,95;UBERON:0006601,4.05e-26,95;UBERON:0010371,9.47e-24,73;UBERON:0002346,2.90e-23,64;UBERON:0003075,2.90e-23,64;UBERON:0007284,2.90e-23,64;UBERON:0001017,1.12e-21,73;UBERON:0000073,3.05e-21,54;UBERON:0001016,1.27e-20,75;UBERON:0001049,1.73e-19,52;UBERON:0005068,1.73e-19,52;UBERON:0006241,1.73e-19,52;UBERON:0007135,1.73e-19,52;UBERON:0003056,1.02e-17,49;UBERON:0010314,6.96e-17,92;UBERON:0000955,1.55e-15,47;UBERON:0006238,1.55e-15,47;UBERON:0002020,1.78e-15,34;UBERON:0002616,8.10e-15,46;UBERON:0003080,1.76e-12,40;UBERON:0003528,9.65e-12,29;UBERON:0002791,9.65e-12,29;UBERON:0001893,9.65e-12,29;UBERON:0002780,1.27e-11,39;UBERON:0001890,1.27e-11,39;UBERON:0006240,1.27e-11,39;UBERON:0002021,9.55e-11,10;UBERON:0000411,9.55e-11,10;UBERON:0001950,9.55e-11,10;UBERON:0000020,1.38e-08,12;UBERON:0001032,1.38e-08,12;UBERON:0004456,1.38e-08,12;UBERON:0003076,3.29e-08,12;UBERON:0003057,3.29e-08,12;UBERON:0000033,1.16e-07,13;UBERON:0002619,1.92e-07,17;UBERON:0002420,2.26e-07,8;UBERON:0007245,2.26e-07,8;UBERON:0010009,2.26e-07,8;UBERON:0010011,2.26e-07,8;UBERON:0000454,2.26e-07,8|phase1_expression=3.20297694209588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.656861476496,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.782391344348039,0.65407546914134,0.219686182734472,0.777719596297134,0.55994568650145,1.43752564364972,0,0,0,0,0,0,2.22548106945558,2.64495489636016,3.1691570175309,0,0,0,0,0,2.99600110518405,2.68952813725088,0.414758449233911,0.540023753326763,0.210324961351382,10.2834354385369,6.62605622854841,0.734944795289724,0.191690942036473,0,17.6185409599022,10.5980490610706,12.4421291937557,2.63772575460388,2.56165402086747,1.56274011167028,12.5632349550621,10.6924895906019,15.4326230254578,10.0173719061047,9.96601765593721,2.60959224155421,0.075726193333184,0.151143120213571,0.289864488701678,0,0,0,0,0,0.421333260395256,0,0,0,5.21120653173718,0,0,0,0,0,0,0.45673551887624,0.517875767294343,1.7813056687779,0.173485326766136,0.304465478312141,0.691846491768175,0.301445281105245,0.705532242814229,0.502666365318702,0,1.01219549843938,0,0.485300549842228,0.220841518460394,0,0,28.3997373101201,24.2958179903608,0,0,0,0,18.574039286198,10.5225138648284,2.1361239859187,12.8629996942285,11.5071955798649,12.8828587626927,10.707923362472,0.305518091550949,0.497627882440372,0,2.31486041475121,1.17108398666433,2.29902104433473,1.62055916824814,1.65775299619287,2.85753296435577,2.3060469651273,3.18585863503078,6.46758426847539,0,0.567318240503458,1.05570674498369,1.09597866213787,1.11218899690239,2.43776516565517,3.08673204611915,0.398068533636986,0,0,0,0.207125772535502,0,0,0,0.393528463494808,0.308534225774757,0.697601834251224,0.268273401399619,0.233530684734339,0,0.820837320395476,0.810688095458557,1.02339991197733,1.75640092232841,1.20785776884335,10.5144974282064,3.60166143327496,0,0,0.426576501070468,0.696710015581316,0.644337306610467,0.403367049246685,0,0.190225626112559,0,0,0.251335208800269,0.397912944082302,0.58489226135736,0,0.216138049874694,0.597423819763102,0.569003702859245,1.02823661348756,3.38123207019241,0.407302655690628,1.16371492300575,0.561086559122548,0.189709611372772,0,0.470996183524124,0,0,0,0.196558995113203,0,0,0,0,0,0,0,0,0,0.624075346229121,0,0,0.482443521363367,0.554259570499814,0,0.325929952884052,0.339490171550376,0,0.167506257441816,0.238043640886014,0,0.157635144106191,0.44292937929755,0.637819074629948,0.81931657357869,1.03610989119537,0.433947175744535,0,0,0,0.55187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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:268890 | |||
|HGNC= | |||
|MCL_coexpression_id=1 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:Q8BLK3 | |||
|association_with_transcript=-16bp_to_NM_175548,uc007zfs.1,uc007zft.1_5end | |||
|cluster_id=chr16:41533415..41533438,+ | |||
|description=CAGE_peak_4_at_Lsamp_5end | |||
|id=chr16:41533415..41533438,+ | |||
|ontology_enrichment_celltype=CL:0000117!8.68e-08!23;CL:0000337!8.68e-08!23;CL:0000221!2.12e-07!44;CL:0000133!2.12e-07!44;CL:0002319!5.50e-07!43 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,3.15e-09,23;CL:0000337,3.15e-09,23 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004121!6.42e-27!102;UBERON:0000924!6.42e-27!102;UBERON:0006601!6.42e-27!102;UBERON:0000033!1.07e-23!63;UBERON:0001017!1.05e-22!73;UBERON:0005743!1.05e-22!73;UBERON:0000073!8.15e-22!75;UBERON:0001016!8.15e-22!75;UBERON:0002346!1.48e-21!71;UBERON:0003075!1.48e-21!71;UBERON:0007284!1.48e-21!71;UBERON:0001049!5.26e-19!52;UBERON:0005068!5.26e-19!52;UBERON:0006241!5.26e-19!52;UBERON:0007135!5.26e-19!52;UBERON:0000955!5.39e-18!50;UBERON:0006238!5.39e-18!50;UBERON:0002616!1.97e-17!49;UBERON:0003056!1.46e-16!49;UBERON:0002020!7.87e-13!34;UBERON:0000153!8.99e-13!94;UBERON:0003080!9.72e-13!40;UBERON:0002780!4.49e-12!39;UBERON:0001890!4.49e-12!39;UBERON:0006240!4.49e-12!39;UBERON:0007811!1.12e-11!86;UBERON:0002791!3.38e-10!29;UBERON:0003528!3.38e-10!29;UBERON:0001893!3.38e-10!29;UBERON:0000468!7.63e-08!333;UBERON:0002021!1.02e-07!10;UBERON:0000411!1.02e-07!10;UBERON:0001950!1.02e-07!10;UBERON:0003076!2.69e-07!12;UBERON:0003057!2.69e-07!12 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004121,4.05e-26,95;UBERON:0000924,4.05e-26,95;UBERON:0006601,4.05e-26,95;UBERON:0010371,9.47e-24,73;UBERON:0002346,2.90e-23,64;UBERON:0003075,2.90e-23,64;UBERON:0007284,2.90e-23,64;UBERON:0001017,1.12e-21,73;UBERON:0000073,3.05e-21,54;UBERON:0001016,1.27e-20,75;UBERON:0001049,1.73e-19,52;UBERON:0005068,1.73e-19,52;UBERON:0006241,1.73e-19,52;UBERON:0007135,1.73e-19,52;UBERON:0003056,1.02e-17,49;UBERON:0010314,6.96e-17,92;UBERON:0000955,1.55e-15,47;UBERON:0006238,1.55e-15,47;UBERON:0002020,1.78e-15,34;UBERON:0002616,8.10e-15,46;UBERON:0003080,1.76e-12,40;UBERON:0003528,9.65e-12,29;UBERON:0002791,9.65e-12,29;UBERON:0001893,9.65e-12,29;UBERON:0002780,1.27e-11,39;UBERON:0001890,1.27e-11,39;UBERON:0006240,1.27e-11,39;UBERON:0002021,9.55e-11,10;UBERON:0000411,9.55e-11,10;UBERON:0001950,9.55e-11,10;UBERON:0000020,1.38e-08,12;UBERON:0001032,1.38e-08,12;UBERON:0004456,1.38e-08,12;UBERON:0003076,3.29e-08,12;UBERON:0003057,3.29e-08,12;UBERON:0000033,1.16e-07,13;UBERON:0002619,1.92e-07,17;UBERON:0002420,2.26e-07,8;UBERON:0007245,2.26e-07,8;UBERON:0010009,2.26e-07,8;UBERON:0010011,2.26e-07,8;UBERON:0000454,2.26e-07,8 | |||
|phase1_expression=3.20297694209588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.656861476496,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.782391344348039,0.65407546914134,0.219686182734472,0.777719596297134,0.55994568650145,1.43752564364972,0,0,0,0,0,0,2.22548106945558,2.64495489636016,3.1691570175309,0,0,0,0,0,2.99600110518405,2.68952813725088,0.414758449233911,0.540023753326763,0.210324961351382,10.2834354385369,6.62605622854841,0.734944795289724,0.191690942036473,0,17.6185409599022,10.5980490610706,12.4421291937557,2.63772575460388,2.56165402086747,1.56274011167028,12.5632349550621,10.6924895906019,15.4326230254578,10.0173719061047,9.96601765593721,2.60959224155421,0.075726193333184,0.151143120213571,0.289864488701678,0,0,0,0,0,0.421333260395256,0,0,0,5.21120653173718,0,0,0,0,0,0,0.45673551887624,0.517875767294343,1.7813056687779,0.173485326766136,0.304465478312141,0.691846491768175,0.301445281105245,0.705532242814229,0.502666365318702,0,1.01219549843938,0,0.485300549842228,0.220841518460394,0,0,28.3997373101201,24.2958179903608,0,0,0,0,18.574039286198,10.5225138648284,2.1361239859187,12.8629996942285,11.5071955798649,12.8828587626927,10.707923362472,0.305518091550949,0.497627882440372,0,2.31486041475121,1.17108398666433,2.29902104433473,1.62055916824814,1.65775299619287,2.85753296435577,2.3060469651273,3.18585863503078,6.46758426847539,0,0.567318240503458,1.05570674498369,1.09597866213787,1.11218899690239,2.43776516565517,3.08673204611915,0.398068533636986,0,0,0,0.207125772535502,0,0,0,0.393528463494808,0.308534225774757,0.697601834251224,0.268273401399619,0.233530684734339,0,0.820837320395476,0.810688095458557,1.02339991197733,1.75640092232841,1.20785776884335,10.5144974282064,3.60166143327496,0,0,0.426576501070468,0.696710015581316,0.644337306610467,0.403367049246685,0,0.190225626112559,0,0,0.251335208800269,0.397912944082302,0.58489226135736,0,0.216138049874694,0.597423819763102,0.569003702859245,1.02823661348756,3.38123207019241,0.407302655690628,1.16371492300575,0.561086559122548,0.189709611372772,0,0.470996183524124,0,0,0,0.196558995113203,0,0,0,0,0,0,0,0,0,0.624075346229121,0,0,0.482443521363367,0.554259570499814,0,0.325929952884052,0.339490171550376,0,0.167506257441816,0.238043640886014,0,0.157635144106191,0.44292937929755,0.637819074629948,0.81931657357869,1.03610989119537,0.433947175744535,0,0,0,0.551873492609465,13.9679013289379,14.417037450841,0,1.00988370881749,0.315508219416257,0.390438744296638,0.215423397732799,0.716906393857656,0.445597348164788,0.566153061577665,0.404810701674894,0,0.395287777946524,6.10510501201433,1.84522110770749,0.712262414669021,0.488660878060728,3.46437258242324,0,0.728341908464944,0.604647113929502,0.188605079755898,0,0.307435147943927,0,0,0,0.316036757935816,0,1.03135543248187,1.36175842301515,0.36012218806262,1.16422815404479,0.428674070063185,0.709360934569094,0.891844088010353,1.81003922662333,0.913394847343798,0.23467170806371,0,0.220528398054962,0.8244312647074,1.13025098687134,1.80938774784468,0.716234064018819,1.14898629821543,0.291480836629851,15.9465759729038,0,0.82554747185289,0.740778109478847,0,0,0,0,0,0,0,0.316335993581135,0.609958401380546,0.432021363287205,0.418176592028937,0.218362563746178,0.674321731924103,0.991841468704031,1.83229159388821,0.388844919875379,0.621339313086926,0,0,0.165458490457098,0,0.258319646955462,0,0.234714477291508,0.5208175393758,0.838874755405687,0.483168241652012,0,0.316011120628178,0,0.410843828659309,0.51968329191118,0,0,0.240390899039938,0,0.100966449948148,0,0.302478555410522,0.292373642219257,0,0.116876902181569,2.0405734525369,0,0.0897138566094757,0,0.965947970160952,0.187682475451182,2.01466786693992,0.643105137237198,0.501572104035363,8.471277639256,15.651058041244,14.8952833494243,11.1704568523397,13.0165678756422,8.3093328712867,14.8504950050997,13.9599572999508,10.8754178156209,10.3552062350364,0.207574695168353,0.399024873401031,1.53660245178721,0.972426868273176,0.838452650511929,0.367687016900028,1.55572709461131,1.44224540067226,2.24643446714271,1.76888048234658,0.25347929989024,0.943131706930381,1.21733959710847,1.47257850531199,0.861532034334199,0,0.811190281613988,1.54327376370964,1.23625770240992,1.17759136107518,1.37147700954166,1.06485483695602,1.90748951957857,0.726732083161643,0.658765662907314,1.94613598150856,0.914639864363863,2.10455769150274,1.22223702461276,1.12228454331548,1.18635018124174,1.18205378850676,1.63692417267876,0.929621047115796,1.15743966588685,1.99848462350357,1.16965804222704,1.28922632428979,1.14772999241306,1.10295709559758,0.927471342481686 | |||
|short_description=p4@Lsamp | |||
}} |
Revision as of 10:40, 6 August 2015
Short description: | p4@Lsamp |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_Lsamp_5end |
Coexpression cluster: | MCL_coexpression_mm9:1 |
Association with transcript: | -16bp_to_NM_175548, uc007zfs.1, uc007zft.1_5end |
EntrezGene: | 268890 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 3.15e-09 | 23 |
neuroblast (sensu Vertebrata) | 3.15e-09 | 23 |