FFCP PHASE1:Mm9::chr8:12395500..12395511,+
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| Short description: | p5@Sox1 |
|---|---|
| Species: | Mouse (Mus musculus) |
| DPI dataset: | NA |
| TSS-like-by-RIKEN-classifier(Yes/No): | NA |
| DHS support(Yes/No): | NA |
| Description: | CAGE_peak_5_at_Sox1_5end |
| Coexpression cluster: | MCL_coexpression_mm9:184 |
| Association with transcript: | -7bp_to_NM_009233, uc009kwa.2_5end |
| EntrezGene: | Sox1 |
| Link to Zenbu: | ZENBU |
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CAGE Expression
| Sample | p5@Sox1 |
|---|
0.0
2.5
5.0
7.5
10.0
12.5
15.0
17.5
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| neural cell | 9.02e-20 | 43 |
| ectodermal cell | 3.18e-19 | 44 |
| neurectodermal cell | 3.18e-19 | 44 |
| CNS neuron (sensu Vertebrata) | 6.33e-19 | 23 |
| neuroblast (sensu Vertebrata) | 6.33e-19 | 23 |
| neuron of cerebral cortex | 2.23e-18 | 6 |
| neuron | 2.53e-12 | 33 |
| neuronal stem cell | 2.53e-12 | 33 |
| neuroblast | 2.53e-12 | 33 |
| electrically signaling cell | 2.53e-12 | 33 |
Showing 1 to 10 of 27 entries
| Ontology term | p-value | n |
|---|---|---|
| central nervous system | 5.03e-27 | 73 |
| nervous system | 3.77e-26 | 75 |
| brain | 1.53e-22 | 47 |
| future brain | 1.53e-22 | 47 |
| regional part of forebrain | 2.35e-22 | 39 |
| forebrain | 2.35e-22 | 39 |
| future forebrain | 2.35e-22 | 39 |
| anterior neural tube | 1.09e-21 | 40 |
| regional part of brain | 1.17e-20 | 46 |
| neural tube | 9.28e-20 | 52 |
Showing 1 to 10 of 40 entries
