FFCP PHASE2:Hg19::chrX:139587228..139587234,-
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Short description: | p1@SOX3 |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_SOX3_5end |
Coexpression cluster: | C139_astrocytoma_skin_salivary_gall_serous_Mallassezderived_renal |
Association with transcript: | -3bp_to_ENST00000370536, NM_005634, uc004fbd.1_5end |
EntrezGene: | SOX3 |
HGNC: | 11199 |
UniProt: | P41225 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
Sample | p1@SOX3 |
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
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neuronal stem cell | 4.46e-31 | 8 |
neuron | 9.64e-24 | 6 |
neuroblast | 9.64e-24 | 6 |
electrically signaling cell | 9.64e-24 | 6 |
neural cell | 1.08e-22 | 25 |
neurectodermal cell | 1.21e-21 | 59 |
embryonic stem cell | 2.55e-20 | 5 |
ectodermal cell | 5.79e-17 | 72 |
astrocyte of the cerebral cortex | 1.90e-13 | 3 |
ciliated cell | 6.39e-13 | 3 |
Showing 1 to 10 of 20 entries
Ontology term | p-value | n |
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central nervous system | 2.06e-23 | 81 |
nervous system | 2.24e-22 | 89 |
neural plate | 5.71e-19 | 82 |
presumptive neural plate | 5.71e-19 | 82 |
ectoderm-derived structure | 4.73e-18 | 171 |
ectoderm | 4.73e-18 | 171 |
presumptive ectoderm | 4.73e-18 | 171 |
neurectoderm | 7.70e-18 | 86 |
pigment epithelium of eye | 7.79e-17 | 11 |
atypical epithelium | 2.04e-16 | 4 |
Showing 1 to 10 of 54 entries