FFCP PHASE2:Mm9::chr17:56109874..56109908,+
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Short description: | p2@Shd |
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Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Shd_5end |
Coexpression cluster: | MCL_coexpression_mm9:22 |
Association with transcript: | 0bp_to_ENSMUST00000044216, NM_001159523, NM_009168, uc008dal.2, uc008dam.2_5end |
EntrezGene: | Shd |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
Sample | p2@Shd |
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
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CNS neuron (sensu Vertebrata) | 2.87e-19 | 23 |
neuroblast (sensu Vertebrata) | 2.87e-19 | 23 |
neuron | 1.83e-18 | 33 |
neuronal stem cell | 1.83e-18 | 33 |
neuroblast | 1.83e-18 | 33 |
electrically signaling cell | 1.83e-18 | 33 |
electrically responsive cell | 1.15e-13 | 39 |
electrically active cell | 1.15e-13 | 39 |
ectodermal cell | 1.87e-11 | 44 |
neurectodermal cell | 1.87e-11 | 44 |
Showing 1 to 10 of 11 entries
Ontology term | p-value | n |
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neurectoderm | 7.58e-26 | 64 |
neural plate | 7.58e-26 | 64 |
presumptive neural plate | 7.58e-26 | 64 |
central nervous system | 1.48e-24 | 73 |
nervous system | 2.78e-23 | 75 |
regional part of nervous system | 6.72e-23 | 54 |
neural tube | 3.99e-22 | 52 |
neural rod | 3.99e-22 | 52 |
future spinal cord | 3.99e-22 | 52 |
neural keel | 3.99e-22 | 52 |
Showing 1 to 10 of 39 entries