FFCP PHASE2:Mm9::chr5:123300163..123300174,+
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| Short description: | p4@Rnf34 |
|---|---|
| Species: | Mouse (Mus musculus) |
| DPI dataset: | NA |
| TSS-like-by-RIKEN-classifier(Yes/No): | NA |
| DHS support(Yes/No): | NA |
| Description: | CAGE_peak_4_at_Rnf34_5end |
| Coexpression cluster: | MCL_coexpression_mm9:60 |
| Association with transcript: | -22bp_to_ENSMUST00000031434, NM_030564, uc008zmp.1_5end |
| EntrezGene: | Rnf34 |
| Link to Zenbu: | ZENBU |
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CAGE Expression
| Sample | p4@Rnf34 |
|---|
0.0
2.5
5.0
7.5
10.0
12.5
15.0
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| CNS neuron (sensu Vertebrata) | 5.89e-11 | 23 |
| neuroblast (sensu Vertebrata) | 5.89e-11 | 23 |
| ectodermal cell | 2.82e-09 | 44 |
| neurectodermal cell | 2.82e-09 | 44 |
| neural cell | 3.64e-09 | 43 |
| neuron | 9.41e-07 | 33 |
| neuronal stem cell | 9.41e-07 | 33 |
| neuroblast | 9.41e-07 | 33 |
| electrically signaling cell | 9.41e-07 | 33 |
Showing 1 to 9 of 9 entries
| Ontology term | p-value | n |
|---|---|---|
| regional part of nervous system | 1.06e-21 | 54 |
| nervous system | 1.08e-20 | 75 |
| central nervous system | 1.86e-20 | 73 |
| neurectoderm | 5.73e-20 | 64 |
| neural plate | 5.73e-20 | 64 |
| presumptive neural plate | 5.73e-20 | 64 |
| neural tube | 6.22e-20 | 52 |
| neural rod | 6.22e-20 | 52 |
| future spinal cord | 6.22e-20 | 52 |
| neural keel | 6.22e-20 | 52 |
Showing 1 to 10 of 40 entries
