FFCP PHASE1:Hg19::chr10:68685806..68685833,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=347731|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=19410|TSSclassifier=S|UniProt=Q86VH5|association_with_transcript=12bp_to_ENST00000373722_5end|coexpression_cluster_id=C3|description=CAGE_peak_2_at_LRRTM3_5end|id=chr10:68685806..68685833,+|ontology_enrichment_celltype=CL:0000047!2.98e-09!8;CL:0000540!4.62e-07!6;CL:0000031!4.62e-07!6;CL:0000404!4.62e-07!6|ontology_enrichment_celltype_v019=CL:0000540;4.74e-08;6!CL:0000404;4.74e-08;6|ontology_enrichment_celltype_v019_2=CL:0000047,1.02e-11,8;CL:0000540,4.14e-08,6;CL:0000031,4.14e-08,6;CL:0000404,4.14e-08,6|ontology_enrichment_development_v019=UBERON:0006601;1.24e-16;82!CL:0000031;4.74e-08;6!UBERON:0006215;1.08e-07;3!UBERON:0006241;7.55e-07;3!UBERON:0003057;7.55e-07;3|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!2.93e-60!82;UBERON:0005743!4.41e-58!86;UBERON:0000073!2.39e-53!94;UBERON:0001016!2.39e-53!94;UBERON:0001049!8.42e-50!57;UBERON:0005068!8.42e-50!57;UBERON:0006241!8.42e-50!57;UBERON:0007135!8.42e-50!57;UBERON:0000955!1.04e-46!69;UBERON:0006238!1.04e-46!69;UBERON:0002616!2.65e-46!59;UBERON:0002780!1.61e-41!41;UBERON:0001890!1.61e-41!41;UBERON:0006240!1.61e-41!41;UBERON:0003080!3.57e-40!42;UBERON:0003075!5.95e-40!86;UBERON:0007284!5.95e-40!86;UBERON:0002346!1.39e-38!90;UBERON:0001893!4.30e-36!34;UBERON:0002020!6.17e-36!34;UBERON:0003528!6.17e-36!34;UBERON:0002791!8.19e-35!33;UBERON:0001869!4.68e-34!32;UBERON:0004121!5.63e-34!169;UBERON:0000924!1.66e-33!173;UBERON:0006601!1.66e-33!173;UBERON:0003056!1.19e-32!61;UBERON:0007023!8.53e-31!115;UBERON:0002619!4.16e-26!22;UBERON:0000956!1.14e-25!25;UBERON:0000203!1.14e-25!25;UBERON:0000033!1.50e-25!123;UBERON:0000153!2.27e-24!129;UBERON:0007811!2.27e-24!129;UBERON:0001950!6.64e-24!20;UBERON:0002420!7.17e-12!9;UBERON:0007245!7.17e-12!9;UBERON:0010009!7.17e-12!9;UBERON:0010011!7.17e-12!9;UBERON:0000454!7.17e-12!9;UBERON:0002308!1.15e-11!9;UBERON:0000125!1.15e-11!9;UBERON:0003076!1.11e-10!15;UBERON:0003057!1.11e-10!15;UBERON:0009663!1.43e-09!7;UBERON:0000025!4.05e-09!194;UBERON:0000200!5.64e-09!6;UBERON:0004732!9.63e-09!13;UBERON:0000064!1.39e-08!219;UBERON:0001871!2.41e-08!7;UBERON:0004733!7.74e-08!12;UBERON:0002028!7.74e-08!12;UBERON:0007277!7.74e-08!12;UBERON:0001872!1.25e-07!5;UBERON:0002298!1.87e-07!8;UBERON:0002021!1.89e-07!5;UBERON:0000475!1.99e-07!365;UBERON:0000349!2.23e-07!5;UBERON:0000119!6.00e-07!312;UBERON:0000483!6.63e-07!309;UBERON:0001894!8.06e-07!7;UBERON:0006222!8.06e-07!7|ontology_enrichment_uberon_v019=UBERON:0001893;1.78e-47;34!UBERON:0003528;6.37e-47;34!UBERON:0002020;6.37e-47;34!UBERON:0001869;1.22e-46;32!UBERON:0002791;3.15e-46;32!UBERON:0002780;6.87e-45;41!UBERON:0001890;6.87e-45;41!UBERON:0002619;4.47e-44;22!UBERON:0000073;4.10e-43;53!UBERON:0002616;4.10e-43;53!UBERON:0001950;2.81e-40;20!UBERON:0000956;3.73e-38;25!UBERON:0000203;3.73e-38;25!UBERON:0001017;1.60e-31;75!UBERON:0000955;6.09e-30;68!UBERON:0001016;3.47e-26;83!UBERON:0002420;3.63e-19;9!UBERON:0007245;3.63e-19;9!UBERON:0010009;3.63e-19;9!UBERON:0010011;3.63e-19;9!UBERON:0000454;3.63e-19;9!UBERON:0000125;7.97e-19;9!UBERON:0002308;7.97e-19;9!UBERON:0009663;3.02e-15;7!UBERON:0004732;8.69e-15;13!UBERON:0000200;2.88e-14;6!UBERON:0004733;3.31e-13;12!UBERON:0002028;3.31e-13;12!UBERON:0002298;2.77e-12;6!UBERON:0001872;6.00e-12;5!UBERON:0007023;9.16e-12;114!UBERON:0002021;1.22e-11;5!UBERON:0001871;1.35e-11;6!UBERON:0000349;1.71e-11;5!UBERON:0000369;4.97e-10;4!UBERON:0002435;4.97e-10;4!UBERON:0000204;4.97e-10;4!UBERON:0011216;1.71e-09;132!UBERON:0002680;1.92e-08;9!UBERON:0001895;1.92e-08;9!UBERON:0001894;3.00e-08;7!UBERON:0001870;4.87e-08;3!UBERON:0005383;7.55e-08;3!UBERON:0005382;7.55e-08;3!UBERON:0000988;4.35e-07;3!UBERON:0002240;7.55e-07;3!UBERON:0005174;7.55e-07;3!UBERON:0001137;7.55e-07;3!UBERON:0001896;7.62e-07;3!UBERON:0005290;7.62e-07;3|ontology_enrichment_uberon_v019_2=UBERON:0001017,7.31e-83,81;UBERON:0001049,2.30e-80,56;UBERON:0005068,2.30e-80,56;UBERON:0006241,2.30e-80,56;UBERON:0007135,2.30e-80,56;UBERON:0001016,1.13e-75,89;UBERON:0000073,7.62e-75,53;UBERON:0002616,7.62e-75,53;UBERON:0000955,1.04e-65,68;UBERON:0006238,1.04e-65,68;UBERON:0002780,1.36e-62,41;UBERON:0001890,1.36e-62,41;UBERON:0003080,1.36e-62,41;UBERON:0006240,1.36e-62,41;UBERON:0001893,6.56e-56,34;UBERON:0003528,1.19e-55,34;UBERON:0002020,1.19e-55,34;UBERON:0003075,4.78e-55,82;UBERON:0007284,4.78e-55,82;UBERON:0001869,2.04e-52,32;UBERON:0002791,6.32e-52,32;UBERON:0002346,8.37e-52,86;UBERON:0002619,4.26e-44,22;UBERON:0010371,6.94e-44,104;UBERON:0003056,3.32e-43,61;UBERON:0004121,1.23e-42,171;UBERON:0000924,1.23e-42,171;UBERON:0006601,1.23e-42,171;UBERON:0001950,2.65e-40,20;UBERON:0000956,3.58e-38,25;UBERON:0000203,3.58e-38,25;UBERON:0007023,6.75e-36,114;UBERON:0010314,1.34e-31,132;UBERON:0011216,1.75e-27,223;UBERON:0002420,3.34e-19,9;UBERON:0007245,3.34e-19,9;UBERON:0010009,3.34e-19,9;UBERON:0010011,3.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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=347731 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=19410 | |||
|TSSclassifier=S | |||
|UniProt=Q86VH5 | |||
|association_with_transcript=12bp_to_ENST00000373722_5end | |||
|coexpression_cluster_id=C3 | |||
|description=CAGE_peak_2_at_LRRTM3_5end | |||
|id=chr10:68685806..68685833,+ | |||
|ontology_enrichment_celltype=CL:0000047!2.98e-09!8;CL:0000540!4.62e-07!6;CL:0000031!4.62e-07!6;CL:0000404!4.62e-07!6 | |||
|ontology_enrichment_celltype_v019=CL:0000540;4.74e-08;6!CL:0000404;4.74e-08;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000047,1.02e-11,8;CL:0000540,4.14e-08,6;CL:0000031,4.14e-08,6;CL:0000404,4.14e-08,6 | |||
|ontology_enrichment_development_v019=UBERON:0006601;1.24e-16;82!CL:0000031;4.74e-08;6!UBERON:0006215;1.08e-07;3!UBERON:0006241;7.55e-07;3!UBERON:0003057;7.55e-07;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|short_description=p2@LRRTM3 | |||
}} |
Revision as of 14:01, 10 September 2013
Short description: | p2@LRRTM3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_LRRTM3_5end |
Coexpression cluster: | C3_occipital_temporal_insula_medial_postcentral_frontal_amygdala |
Association with transcript: | 12bp_to_ENST00000373722_5end |
EntrezGene: | LRRTM3 |
HGNC: | 19410 |
UniProt: | Q86VH5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuronal stem cell | 1.02e-11 | 8 |
neuron | 4.14e-08 | 6 |
neuroblast | 4.14e-08 | 6 |
electrically signaling cell | 4.14e-08 | 6 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.