FFCP PHASE1:Hg19::chr11:123525648..123525658,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=55800|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=20665|TSSclassifier=S|UniProt=E9PJP6|association_with_transcript=55bp_to_ENST00000527836_5end|coexpression_cluster_id=C3|description=CAGE_peak_19_at_SCN3B_5end|id=chr11:123525648..123525658,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_development_v019=UBERON:0006601;4.51e-11;82|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001893!1.67e-53!34;UBERON:0002020!1.77e-53!34;UBERON:0003528!1.77e-53!34;UBERON:0002619!2.81e-53!22;UBERON:0001869!1.38e-51!32;UBERON:0001950!2.84e-51!20;UBERON:0002791!1.45e-49!33;UBERON:0001049!1.40e-48!57;UBERON:0005068!1.40e-48!57;UBERON:0006241!1.40e-48!57;UBERON:0007135!1.40e-48!57;UBERON:0000956!1.05e-46!25;UBERON:0000203!1.05e-46!25;UBERON:0002780!8.30e-44!41;UBERON:0001890!8.30e-44!41;UBERON:0006240!8.30e-44!41;UBERON:0002616!7.44e-43!59;UBERON:0003080!1.11e-42!42;UBERON:0000955!1.10e-38!69;UBERON:0006238!1.10e-38!69;UBERON:0001017!8.94e-38!82;UBERON:0000073!2.94e-37!94;UBERON:0001016!2.94e-37!94;UBERON:0003075!3.77e-36!86;UBERON:0007284!3.77e-36!86;UBERON:0005743!8.80e-36!86;UBERON:0002346!2.70e-34!90;UBERON:0003056!3.37e-31!61;UBERON:0007023!6.18e-28!115;UBERON:0000033!3.14e-23!123;UBERON:0001871!3.08e-22!7;UBERON:0000153!6.89e-22!129;UBERON:0007811!6.89e-22!129;UBERON:0000200!5.86e-21!6;UBERON:0004121!9.20e-20!169;UBERON:0000924!3.65e-19!173;UBERON:0006601!3.65e-19!173;UBERON:0000349!5.65e-17!5;UBERON:0000988!3.43e-15!3;UBERON:0000025!1.10e-12!194;UBERON:0001870!1.81e-11!2;UBERON:0001876!2.59e-11!2;UBERON:0004111!5.83e-11!241;UBERON:0002148!1.11e-10!2;UBERON:0009662!1.11e-10!2;UBERON:0000477!5.49e-10!286;UBERON:0002298!8.37e-10!8;UBERON:0002021!8.75e-10!5;UBERON:0001872!9.57e-10!5;UBERON:0002420!2.48e-09!9;UBERON:0007245!2.48e-09!9;UBERON:0010009!2.48e-09!9;UBERON:0010011!2.48e-09!9;UBERON:0000454!2.48e-09!9;UBERON:0002308!4.61e-09!9;UBERON:0000125!4.61e-09!9;UBERON:0000064!1.18e-08!219;UBERON:0000483!5.31e-08!309;UBERON:0003076!6.93e-08!15;UBERON:0003057!6.93e-08!15;UBERON:0000119!7.29e-08!312;UBERON:0002771!1.99e-07!3;UBERON:0006331!2.13e-07!3;UBERON:0000475!4.41e-07!365|ontology_enrichment_uberon_v019=UBERON:0000349;3.24e-51;5!UBERON:0002619;5.92e-31;22!UBERON:0001882;1.78e-29;1!UBERON:0002022;1.78e-29;1!UBERON:0005403;1.78e-29;1!UBERON:0002791;6.15e-29;32!UBERON:0001869;6.15e-29;32!UBERON:0000956;1.91e-27;25!UBERON:0000203;1.91e-27;25!UBERON:0001893;2.77e-27;34!UBERON:0003528;4.28e-27;34!UBERON:0002020;4.28e-27;34!UBERON:0001950;5.19e-22;20!UBERON:0002780;4.21e-20;41!UBERON:0001890;4.21e-20;41!UBERON:0001871;3.70e-17;6!UBERON:0001876;1.78e-15;2!UBERON:0002360;1.78e-15;2!UBERON:0001954;1.78e-15;2!UBERON:0000094;1.78e-15;2!UBERON:0003022;1.78e-15;2!UBERON:0002421;1.78e-15;2!UBERON:0002600;1.78e-15;2!UBERON:0010743;1.78e-15;2!UBERON:0002420;1.39e-13;9!UBERON:0007245;1.39e-13;9!UBERON:0010009;1.39e-13;9!UBERON:0010011;1.39e-13;9!UBERON:0000454;1.39e-13;9!UBERON:0000073;3.73e-13;53!UBERON:0002616;3.73e-13;53!UBERON:0000955;8.62e-10;68!UBERON:0001017;1.65e-09;75!UBERON:0000369;2.11e-08;4!UBERON:0002435;2.11e-08;4!UBERON:0000204;2.11e-08;4!UBERON:0001016;3.09e-07;83!UBERON:0002021;5.70e-07;5|ontology_enrichment_uberon_v019_2=UBERON:0000349,2.73e-51,5;UBERON:0002619,4.34e-31,22;UBERON:0002791,5.15e-31,32;UBERON:0001869,5.15e-31,32;UBERON:0002022,2.37e-29,1;UBERON:0003528,2.87e-29,34;UBERON:0002020,2.87e-29,34;UBERON:0001893,2.87e-29,34;UBERON:0001882,4.20e-29,1;UBERON:0005403,4.20e-29,1;UBERON:0000956,1.45e-27,25;UBERON:0000203,1.45e-27,25;UBERON:0002780,1.83e-24,41;UBERON:0001890,1.83e-24,41;UBERON:0003080,1.83e-24,41;UBERON:0006240,1.83e-24,41;UBERON:0001950,4.18e-22,20;UBERON:0000073,4.12e-19,53;UBERON:0002616,4.12e-19,53;UBERON:0001049,4.00e-18,56;UBERON:0005068,4.00e-18,56;UBERON:0006241,4.00e-18,56;UBERON:0007135,4.00e-18,56;UBERON:0001871,2.46e-17,6;UBERON:0001017,6.63e-17,81;UBERON:0003056,1.09e-16,61;UBERON:0001876,1.15e-15,2;UBERON:0001954,1.54e-15,2;UBERON:0003022,1.54e-15,2;UBERON:0002421,1.54e-15,2;UBERON:0002600,1.54e-15,2;UBERON:0002360,2.37e-15,2;UBERON:0000094,2.37e-15,2;UBERON:0010743,2.37e-15,2;UBERON:0001016,2.81e-15,89;UBERON:0000955,8.13e-15,68;UBERON:0006238,8.13e-15,68;UBERON:0002420,1.40e-13,9;UBERON:0007245,1.40e-13,9;UBERON:0010009,1.40e-13,9;UBERON:0010011,1.40e-13,9;UBERON:0000454,1.40e-13,9;UBERON:0003075,1.55e-12,82;UBERON:0007284,1.55e-12,82;UBERON:0007023,2.25e-12,114;UBERON:0002346,5.68e-12,86;UBERON:0010371,5.90e-10,104;UBERON:0000369,2.61e-08,4;UBERON:0002435,2.61e-08,4;UBERON:0000204,2.61e-08,4;UBERON:0010082,2.61e-08,4;UBERON:0004121,3.72e-08,171;UBERON:0000924,3.72e-08,171;UBERON:0006601,3.72e-08,171;UBERON:0010314,6.84e-08,132;UBERON:0002021,5.70e-07,5|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=55800 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=20665 | |||
|TSSclassifier=S | |||
|UniProt=E9PJP6 | |||
|association_with_transcript=55bp_to_ENST00000527836_5end | |||
|coexpression_cluster_id=C3 | |||
|description=CAGE_peak_19_at_SCN3B_5end | |||
|id=chr11:123525648..123525658,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;4.51e-11;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001893!1.67e-53!34;UBERON:0002020!1.77e-53!34;UBERON:0003528!1.77e-53!34;UBERON:0002619!2.81e-53!22;UBERON:0001869!1.38e-51!32;UBERON:0001950!2.84e-51!20;UBERON:0002791!1.45e-49!33;UBERON:0001049!1.40e-48!57;UBERON:0005068!1.40e-48!57;UBERON:0006241!1.40e-48!57;UBERON:0007135!1.40e-48!57;UBERON:0000956!1.05e-46!25;UBERON:0000203!1.05e-46!25;UBERON:0002780!8.30e-44!41;UBERON:0001890!8.30e-44!41;UBERON:0006240!8.30e-44!41;UBERON:0002616!7.44e-43!59;UBERON:0003080!1.11e-42!42;UBERON:0000955!1.10e-38!69;UBERON:0006238!1.10e-38!69;UBERON:0001017!8.94e-38!82;UBERON:0000073!2.94e-37!94;UBERON:0001016!2.94e-37!94;UBERON:0003075!3.77e-36!86;UBERON:0007284!3.77e-36!86;UBERON:0005743!8.80e-36!86;UBERON:0002346!2.70e-34!90;UBERON:0003056!3.37e-31!61;UBERON:0007023!6.18e-28!115;UBERON:0000033!3.14e-23!123;UBERON:0001871!3.08e-22!7;UBERON:0000153!6.89e-22!129;UBERON:0007811!6.89e-22!129;UBERON:0000200!5.86e-21!6;UBERON:0004121!9.20e-20!169;UBERON:0000924!3.65e-19!173;UBERON:0006601!3.65e-19!173;UBERON:0000349!5.65e-17!5;UBERON:0000988!3.43e-15!3;UBERON:0000025!1.10e-12!194;UBERON:0001870!1.81e-11!2;UBERON:0001876!2.59e-11!2;UBERON:0004111!5.83e-11!241;UBERON:0002148!1.11e-10!2;UBERON:0009662!1.11e-10!2;UBERON:0000477!5.49e-10!286;UBERON:0002298!8.37e-10!8;UBERON:0002021!8.75e-10!5;UBERON:0001872!9.57e-10!5;UBERON:0002420!2.48e-09!9;UBERON:0007245!2.48e-09!9;UBERON:0010009!2.48e-09!9;UBERON:0010011!2.48e-09!9;UBERON:0000454!2.48e-09!9;UBERON:0002308!4.61e-09!9;UBERON:0000125!4.61e-09!9;UBERON:0000064!1.18e-08!219;UBERON:0000483!5.31e-08!309;UBERON:0003076!6.93e-08!15;UBERON:0003057!6.93e-08!15;UBERON:0000119!7.29e-08!312;UBERON:0002771!1.99e-07!3;UBERON:0006331!2.13e-07!3;UBERON:0000475!4.41e-07!365 | |||
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|short_description=p19@SCN3B | |||
}} |
Revision as of 16:23, 10 September 2013
Short description: | p19@SCN3B |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_19_at_SCN3B_5end |
Coexpression cluster: | C3_occipital_temporal_insula_medial_postcentral_frontal_amygdala |
Association with transcript: | 55bp_to_ENST00000527836_5end |
EntrezGene: | SCN3B |
HGNC: | 20665 |
UniProt: | E9PJP6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.