FFCP PHASE1:Hg19::chr11:31832687..31832704,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=5080|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=8620|TSSclassifier=S|UniProt=B1B1I8|association_with_transcript=-2bp_to_ENST00000438681_5end|coexpression_cluster_id=C798|description=CAGE_peak_6_at_PAX6_5end|id=chr11:31832687..31832704,-|ontology_enrichment_celltype=CL:0002319!5.12e-11!25;CL:0000095!6.63e-09!17;CL:0000123!6.63e-09!17;CL:0000133!1.13e-07!59;CL:0000243!1.90e-07!15;CL:0000125!1.90e-07!15;CL:0000030!1.90e-07!15;CL:0000339!1.90e-07!15;CL:0000128!2.70e-07!7;CL:0000126!2.70e-07!7;CL:0000127!2.70e-07!7;CL:0002453!2.70e-07!7|ontology_enrichment_celltype_v019=CL:0002319;4.51e-10;25!CL:0000128;5.25e-08;7!CL:0000126;5.25e-08;7!CL:0000127;5.25e-08;7|ontology_enrichment_celltype_v019_2=CL:0002319,4.94e-10,25;CL:0000128,4.48e-08,7;CL:0000126,4.48e-08,7;CL:0000127,4.48e-08,7;CL:0002453,4.48e-08,7;CL:0000133,4.24e-07,59|ontology_enrichment_development_v019=UBERON:0006601;5.98e-10;82!UBERON:0006215;6.59e-07;3|ontology_enrichment_disease=DOID:0050687!5.66e-14!143;DOID:14566!7.46e-11!239;DOID:162!1.26e-10!235;DOID:305!7.81e-10!106|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000073!2.13e-51!94;UBERON:0001016!2.13e-51!94;UBERON:0005743!1.65e-49!86;UBERON:0001049!3.52e-48!57;UBERON:0005068!3.52e-48!57;UBERON:0006241!3.52e-48!57;UBERON:0007135!3.52e-48!57;UBERON:0002346!5.34e-48!90;UBERON:0003075!5.44e-47!86;UBERON:0007284!5.44e-47!86;UBERON:0001017!5.03e-46!82;UBERON:0002616!7.86e-41!59;UBERON:0000955!1.10e-40!69;UBERON:0006238!1.10e-40!69;UBERON:0003056!1.13e-38!61;UBERON:0002780!1.34e-34!41;UBERON:0001890!1.34e-34!41;UBERON:0006240!1.34e-34!41;UBERON:0003080!2.09e-33!42;UBERON:0002020!2.92e-31!34;UBERON:0003528!2.92e-31!34;UBERON:0001893!6.79e-31!34;UBERON:0000033!8.42e-31!123;UBERON:0002791!3.56e-30!33;UBERON:0000924!1.03e-29!173;UBERON:0006601!1.03e-29!173;UBERON:0001869!3.02e-29!32;UBERON:0000153!7.08e-29!129;UBERON:0007811!7.08e-29!129;UBERON:0004121!1.57e-28!169;UBERON:0000956!7.09e-23!25;UBERON:0000203!7.09e-23!25;UBERON:0002619!6.97e-20!22;UBERON:0001950!6.69e-18!20;UBERON:0003076!1.33e-15!15;UBERON:0003057!1.33e-15!15;UBERON:0004733!1.72e-12!12;UBERON:0002028!1.72e-12!12;UBERON:0007277!1.72e-12!12;UBERON:0004732!3.33e-11!13;UBERON:0007023!3.37e-10!115;UBERON:0002308!8.69e-10!9;UBERON:0000125!8.69e-10!9;UBERON:0002680!1.82e-09!9;UBERON:0001895!1.82e-09!9;UBERON:0010092!1.82e-09!9;UBERON:0002420!1.96e-09!9;UBERON:0007245!1.96e-09!9;UBERON:0010009!1.96e-09!9;UBERON:0010011!1.96e-09!9;UBERON:0000454!1.96e-09!9;UBERON:0007625!2.07e-09!11;UBERON:0000025!1.26e-08!194;UBERON:0000475!2.45e-08!365;UBERON:0000970!4.76e-08!20;UBERON:0009663!6.74e-08!7;UBERON:0000064!7.15e-08!219;UBERON:0001871!8.05e-08!7;UBERON:0002104!1.86e-07!21;UBERON:0000019!2.43e-07!19;UBERON:0000047!2.43e-07!19;UBERON:0004088!2.43e-07!19;UBERON:0003072!2.43e-07!19;UBERON:0003071!2.43e-07!19;UBERON:0004128!2.43e-07!19;UBERON:0000483!4.24e-07!309;UBERON:0002037!5.27e-07!6;UBERON:0006215!5.27e-07!6;UBERON:0000119!8.27e-07!312|ontology_enrichment_uberon_v019=UBERON:0001893;5.54e-34;34!UBERON:0003528;6.33e-34;34!UBERON:0002020;6.33e-34;34!UBERON:0002791;9.81e-34;32!UBERON:0001869;5.12e-33;32!UBERON:0000073;4.10e-32;53!UBERON:0002616;4.10e-32;53!UBERON:0002780;1.72e-30;41!UBERON:0001890;1.72e-30;41!UBERON:0000956;4.03e-27;25!UBERON:0000203;4.03e-27;25!UBERON:0002619;1.11e-22;22!UBERON:0001017;2.95e-22;75!UBERON:0000955;4.11e-21;68!UBERON:0001016;2.87e-20;83!UBERON:0001950;8.30e-20;20!UBERON:0004733;5.44e-16;12!UBERON:0002028;5.44e-16;12!UBERON:0004732;1.58e-14;13!UBERON:0000125;3.62e-14;9!UBERON:0002308;3.62e-14;9!UBERON:0002420;1.57e-13;9!UBERON:0007245;1.57e-13;9!UBERON:0010009;1.57e-13;9!UBERON:0010011;1.57e-13;9!UBERON:0000454;1.57e-13;9!UBERON:0007625;7.85e-12;11!UBERON:0002680;2.25e-11;9!UBERON:0001895;2.25e-11;9!UBERON:0009663;2.91e-11;7!UBERON:0002298;2.86e-10;6!UBERON:0000970;6.98e-10;20!UBERON:0000200;2.58e-09;6!UBERON:0002104;2.90e-09;21!UBERON:0000019;7.53e-09;19!UBERON:0000047;7.53e-09;19!UBERON:0004088;7.53e-09;19!UBERON:0010230;7.53e-09;19!UBERON:0011216;1.92e-08;132!UBERON:0000020;3.41e-08;23!UBERON:0000349;3.53e-08;5!UBERON:0000488;6.27e-08;4!UBERON:0001456;9.51e-08;21!UBERON:0001032;9.96e-08;24!UBERON:0004456;9.96e-08;24!UBERON:0002784;1.39e-07;4!UBERON:0001871;1.67e-07;6!UBERON:0002037;1.70e-07;6!UBERON:0010314;1.82e-07;132!UBERON:0000369;4.72e-07;4!UBERON:0002435;4.72e-07;4!UBERON:0000204;4.72e-07;4!UBERON:0007023;8.81e-07;114|ontology_enrichment_uberon_v019_2=UBERON:0001049,4.40e-64,56;UBERON:0005068,4.40e-64,56;UBERON:0006241,4.40e-64,56;UBERON:0007135,4.40e-64,56;UBERON:0003075,9.93e-63,82;UBERON:0007284,9.93e-63,82;UBERON:0002346,6.94e-61,86;UBERON:0001016,1.02e-59,89;UBERON:0000073,4.28e-59,53;UBERON:0002616,4.28e-59,53;UBERON:0001017,2.01e-57,81;UBERON:0003056,3.20e-49,61;UBERON:0010371,5.47e-49,104;UBERON:0000955,3.92e-48,68;UBERON:0006238,3.92e-48,68;UBERON:0002780,5.68e-44,41;UBERON:0001890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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=5080 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=8620 | |||
|TSSclassifier=S | |||
|UniProt=B1B1I8 | |||
|association_with_transcript=-2bp_to_ENST00000438681_5end | |||
|coexpression_cluster_id=C798 | |||
|description=CAGE_peak_6_at_PAX6_5end | |||
|id=chr11:31832687..31832704,- | |||
|ontology_enrichment_celltype=CL:0002319!5.12e-11!25;CL:0000095!6.63e-09!17;CL:0000123!6.63e-09!17;CL:0000133!1.13e-07!59;CL:0000243!1.90e-07!15;CL:0000125!1.90e-07!15;CL:0000030!1.90e-07!15;CL:0000339!1.90e-07!15;CL:0000128!2.70e-07!7;CL:0000126!2.70e-07!7;CL:0000127!2.70e-07!7;CL:0002453!2.70e-07!7 | |||
|ontology_enrichment_celltype_v019=CL:0002319;4.51e-10;25!CL:0000128;5.25e-08;7!CL:0000126;5.25e-08;7!CL:0000127;5.25e-08;7 | |||
|ontology_enrichment_celltype_v019_2=CL:0002319,4.94e-10,25;CL:0000128,4.48e-08,7;CL:0000126,4.48e-08,7;CL:0000127,4.48e-08,7;CL:0002453,4.48e-08,7;CL:0000133,4.24e-07,59 | |||
|ontology_enrichment_development_v019=UBERON:0006601;5.98e-10;82!UBERON:0006215;6.59e-07;3 | |||
|ontology_enrichment_disease=DOID:0050687!5.66e-14!143;DOID:14566!7.46e-11!239;DOID:162!1.26e-10!235;DOID:305!7.81e-10!106 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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| |||
|short_description=p6@PAX6 | |||
}} |
Revision as of 17:26, 10 September 2013
Short description: | p6@PAX6 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_6_at_PAX6_5end |
Coexpression cluster: | C798_cerebellum_small_carcinosarcoma_argyrophil_Neural_gastric_Ciliary |
Association with transcript: | -2bp_to_ENST00000438681_5end |
EntrezGene: | PAX6 |
HGNC: | 8620 |
UniProt: | B1B1I8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neural cell | 4.94e-10 | 25 |
oligodendrocyte | 4.48e-08 | 7 |
macroglial cell | 4.48e-08 | 7 |
astrocyte | 4.48e-08 | 7 |
oligodendrocyte precursor cell | 4.48e-08 | 7 |
neurectodermal cell | 4.24e-07 | 59 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.