FFCP PHASE1:Hg19::chr13:36429731..36429762,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=9201|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=2700|TSSclassifier=S|UniProt=|association_with_transcript=16bp_to_ENST00000379893_5end|coexpression_cluster_id=C1706|description=CAGE_peak_4_at_DCLK1_5end|id=chr13:36429731..36429762,-|ontology_enrichment_celltype=CL:0000047!2.68e-10!8;CL:0000540!3.60e-08!6;CL:0000031!3.60e-08!6;CL:0000404!3.60e-08!6;CL:0002322!2.57e-07!5|ontology_enrichment_celltype_v019=CL:0002322;2.62e-11;5!CL:0000540;3.06e-09;6!CL:0000404;3.06e-09;6|ontology_enrichment_celltype_v019_2=CL:0000047,7.04e-13,8;CL:0002322,2.59e-11,5;CL:0000540,2.46e-09,6;CL:0000031,2.46e-09,6;CL:0000404,2.46e-09,6|ontology_enrichment_development_v019=UBERON:0006601;2.31e-17;82!CL:0000031;3.06e-09;6!UBERON:0006241;4.94e-07;3!UBERON:0003057;4.94e-07;3!UBERON:0006215;6.99e-07;3|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!1.75e-60!82;UBERON:0005743!2.88e-58!86;UBERON:0000073!3.02e-54!94;UBERON:0001016!3.02e-54!94;UBERON:0001049!8.24e-54!57;UBERON:0005068!8.24e-54!57;UBERON:0006241!8.24e-54!57;UBERON:0007135!8.24e-54!57;UBERON:0000955!8.72e-46!69;UBERON:0006238!8.72e-46!69;UBERON:0002780!4.86e-45!41;UBERON:0001890!4.86e-45!41;UBERON:0006240!4.86e-45!41;UBERON:0002616!1.17e-44!59;UBERON:0003080!1.24e-43!42;UBERON:0007023!8.35e-41!115;UBERON:0002020!8.21e-37!34;UBERON:0003528!8.21e-37!34;UBERON:0001893!9.53e-37!34;UBERON:0003075!1.55e-36!86;UBERON:0007284!1.55e-36!86;UBERON:0002791!2.53e-35!33;UBERON:0001869!1.13e-34!32;UBERON:0002346!4.86e-34!90;UBERON:0003056!2.58e-28!61;UBERON:0002619!5.12e-28!22;UBERON:0000956!1.07e-25!25;UBERON:0000203!1.07e-25!25;UBERON:0001950!1.49e-25!20;UBERON:0004121!5.00e-25!169;UBERON:0000924!6.59e-24!173;UBERON:0006601!6.59e-24!173;UBERON:0000033!3.73e-23!123;UBERON:0000153!5.46e-23!129;UBERON:0007811!5.46e-23!129;UBERON:0000025!1.67e-13!194;UBERON:0002308!1.41e-12!9;UBERON:0000125!1.41e-12!9;UBERON:0004111!1.85e-12!241;UBERON:0002420!2.13e-12!9;UBERON:0007245!2.13e-12!9;UBERON:0010009!2.13e-12!9;UBERON:0010011!2.13e-12!9;UBERON:0000454!2.13e-12!9;UBERON:0003076!3.17e-11!15;UBERON:0003057!3.17e-11!15;UBERON:0000475!2.96e-10!365;UBERON:0009663!4.45e-10!7;UBERON:0000477!7.30e-10!286;UBERON:0001894!1.40e-09!7;UBERON:0006222!1.40e-09!7;UBERON:0000200!1.46e-09!6;UBERON:0004732!2.09e-09!13;UBERON:0001871!1.25e-08!7;UBERON:0001872!2.52e-08!5;UBERON:0004733!3.06e-08!12;UBERON:0002028!3.06e-08!12;UBERON:0007277!3.06e-08!12;UBERON:0002298!3.24e-08!8;UBERON:0000468!3.31e-08!659;UBERON:0002021!5.94e-08!5;UBERON:0000349!9.90e-08!5;UBERON:0000064!2.23e-07!219;UBERON:0000483!3.60e-07!309;UBERON:0000119!6.40e-07!312;UBERON:0000369!6.72e-07!4;UBERON:0002435!6.72e-07!4;UBERON:0000204!6.72e-07!4;UBERON:0010082!6.72e-07!4;UBERON:0000062!6.74e-07!511|ontology_enrichment_uberon_v019=UBERON:0002780;3.36e-52;41!UBERON:0001890;3.36e-52;41!UBERON:0001893;1.30e-50;34!UBERON:0003528;3.74e-50;34!UBERON:0002020;3.74e-50;34!UBERON:0001869;9.25e-50;32!UBERON:0002791;3.47e-49;32!UBERON:0000073;9.43e-49;53!UBERON:0002616;9.43e-49;53!UBERON:0002619;6.49e-47;22!UBERON:0001950;1.06e-42;20!UBERON:0000956;1.07e-40;25!UBERON:0000203;1.07e-40;25!UBERON:0000955;1.23e-33;68!UBERON:0001017;1.42e-33;75!UBERON:0001016;3.55e-28;83!UBERON:0000125;3.42e-20;9!UBERON:0002308;3.42e-20;9!UBERON:0002420;7.17e-20;9!UBERON:0007245;7.17e-20;9!UBERON:0010009;7.17e-20;9!UBERON:0010011;7.17e-20;9!UBERON:0000454;7.17e-20;9!UBERON:0009663;5.90e-16;7!UBERON:0004732;1.19e-15;13!UBERON:0001894;3.17e-15;7!UBERON:0000200;4.33e-15;6!UBERON:0007023;4.72e-14;114!UBERON:0004733;1.19e-13;12!UBERON:0002028;1.19e-13;12!UBERON:0002298;1.25e-13;6!UBERON:0001872;5.13e-13;5!UBERON:0002021;2.04e-12;5!UBERON:0000349;5.30e-12;5!UBERON:0001871;7.43e-12;6!UBERON:0000369;1.36e-10;4!UBERON:0002435;1.36e-10;4!UBERON:0000204;1.36e-10;4!UBERON:0011216;5.84e-10;132!UBERON:0003296;1.29e-09;4!UBERON:0010133;1.29e-09;4!UBERON:0002784;3.65e-09;4!UBERON:0002680;1.73e-08;9!UBERON:0001895;1.73e-08;9!UBERON:0001870;2.25e-08;3!UBERON:0005383;2.57e-08;3!UBERON:0005382;2.57e-08;3!UBERON:0000988;6.49e-08;3!UBERON:0001896;2.18e-07;3!UBERON:0005290;2.18e-07;3!UBERON:0010314;4.72e-07;132!UBERON:0002240;4.94e-07;3!UBERON:0005174;4.94e-07;3!UBERON:0001137;4.94e-07;3|ontology_enrichment_uberon_v019_2=UBERON:0001049,7.80e-92,56;UBERON:0005068,7.80e-92,56;UBERON:0006241,7.80e-92,56;UBERON:0007135,7.80e-92,56;UBERON:0001017,1.27e-91,81;UBERON:0000073,5.03e-86,53;UBERON:0002616,5.03e-86,53;UBERON:0001016,3.36e-84,89;UBERON:0002780,1.64e-73,41;UBERON:0001890,1.64e-73,41;UBERON:0003080,1.64e-73,41;UBERON:0006240,1.64e-73,41;UBERON:0000955,7.92e-73,68;UBERON:0006238,7.92e-73,68;UBERON:0003075,2.78e-61,82;UBERON:0007284,2.78e-61,82;UBERON:0003528,1.63e-59,34;UBERON:0002020,1.63e-59,34;UBERON:0001893,2.09e-59,34;UBERON:0002346,8.85e-58,86;UBERON:0001869,7.07e-56,32;UBERON:0002791,3.61e-55,32;UBERON:0003056,7.18e-49,61;UBERON:0002619,7.1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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=9201 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=2700 | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=16bp_to_ENST00000379893_5end | |||
|coexpression_cluster_id=C1706 | |||
|description=CAGE_peak_4_at_DCLK1_5end | |||
|id=chr13:36429731..36429762,- | |||
|ontology_enrichment_celltype=CL:0000047!2.68e-10!8;CL:0000540!3.60e-08!6;CL:0000031!3.60e-08!6;CL:0000404!3.60e-08!6;CL:0002322!2.57e-07!5 | |||
|ontology_enrichment_celltype_v019=CL:0002322;2.62e-11;5!CL:0000540;3.06e-09;6!CL:0000404;3.06e-09;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000047,7.04e-13,8;CL:0002322,2.59e-11,5;CL:0000540,2.46e-09,6;CL:0000031,2.46e-09,6;CL:0000404,2.46e-09,6 | |||
|ontology_enrichment_development_v019=UBERON:0006601;2.31e-17;82!CL:0000031;3.06e-09;6!UBERON:0006241;4.94e-07;3!UBERON:0003057;4.94e-07;3!UBERON:0006215;6.99e-07;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|short_description=p4@DCLK1 | |||
}} |
Revision as of 02:06, 11 September 2013
Short description: | p4@DCLK1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_DCLK1_5end |
Coexpression cluster: | C1706_pineal_occipital_paracentral_postcentral_alveolar_parietal_medial |
Association with transcript: | 16bp_to_ENST00000379893_5end |
EntrezGene: | DCLK1 |
HGNC: | 2700 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuronal stem cell | 7.04e-13 | 8 |
embryonic stem cell | 2.59e-11 | 5 |
neuron | 2.46e-09 | 6 |
neuroblast | 2.46e-09 | 6 |
electrically signaling cell | 2.46e-09 | 6 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.