FFCP PHASE1:Hg19::chr18:5540384..5540434,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=23136|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=3380|TSSclassifier=S|UniProt=Q9Y2J2,F5GX05|association_with_transcript=120bp_to_ENST00000342933,ENST00000400111,ENST00000544123,uc010wzh.1_5end|coexpression_cluster_id=C1|description=CAGE_peak_6_at_EPB41L3_5end|id=chr18:5540384..5540434,-|ontology_enrichment_celltype=CL:0002057!9.30e-07!42|ontology_enrichment_celltype_v019=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_development_v019=|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0007023!1.87e-32!115;UBERON:0001049!1.08e-25!57;UBERON:0005068!1.08e-25!57;UBERON:0006241!1.08e-25!57;UBERON:0007135!1.08e-25!57;UBERON:0001017!1.41e-22!82;UBERON:0005743!1.10e-21!86;UBERON:0003075!6.68e-21!86;UBERON:0007284!6.68e-21!86;UBERON:0002346!2.49e-20!90;UBERON:0002616!5.01e-20!59;UBERON:0000073!5.42e-20!94;UBERON:0001016!5.42e-20!94;UBERON:0002780!1.22e-19!41;UBERON:0001890!1.22e-19!41;UBERON:0006240!1.22e-19!41;UBERON:0001950!1.86e-19!20;UBERON:0002619!5.33e-19!22;UBERON:0003080!6.51e-19!42;UBERON:0000955!9.35e-18!69;UBERON:0006238!9.35e-18!69;UBERON:0002020!2.35e-16!34;UBERON:0003528!2.35e-16!34;UBERON:0001893!4.71e-16!34;UBERON:0001869!4.81e-16!32;UBERON:0000956!6.83e-16!25;UBERON:0000203!6.83e-16!25;UBERON:0002791!3.96e-15!33;UBERON:0003056!4.15e-12!61;UBERON:0000025!3.90e-10!194;UBERON:0000467!5.93e-10!625;UBERON:0000480!7.32e-10!626;UBERON:0000153!3.69e-09!129;UBERON:0007811!3.69e-09!129;UBERON:0000922!5.08e-09!612;UBERON:0000468!5.12e-09!659;UBERON:0000923!6.06e-09!604;UBERON:0005291!6.06e-09!604;UBERON:0006598!6.06e-09!604;UBERON:0002532!6.06e-09!604;UBERON:0002050!7.40e-09!605;UBERON:0005423!7.40e-09!605;UBERON:0000062!7.81e-09!511;UBERON:0000033!8.47e-09!123;UBERON:0004121!3.70e-08!169;UBERON:0000924!4.00e-08!173;UBERON:0006601!4.00e-08!173;UBERON:0003076!5.87e-08!15;UBERON:0003057!5.87e-08!15;UBERON:0000477!6.55e-08!286;UBERON:0004111!1.83e-07!241;UBERON:0000200!1.99e-07!6;UBERON:0001871!3.46e-07!7|ontology_enrichment_uberon_v019=UBERON:0001950;5.11e-28;20!UBERON:0002619;2.97e-25;22!UBERON:0000956;6.60e-22;25!UBERON:0000203;6.60e-22;25!UBERON:0003528;3.07e-20;34!UBERON:0002020;3.07e-20;34!UBERON:0001869;1.34e-19;32!UBERON:0002298;2.08e-18;6!UBERON:0001893;8.16e-18;34!UBERON:0002791;6.45e-17;32!UBERON:0000073;6.88e-17;53!UBERON:0002616;6.88e-17;53!UBERON:0002780;5.55e-15;41!UBERON:0001890;5.55e-15;41!UBERON:0001872;1.19e-14;5!UBERON:0004733;1.02e-11;12!UBERON:0002028;1.02e-11;12!UBERON:0000988;9.66e-11;3!UBERON:0004732;9.89e-11;13!UBERON:0001017;1.18e-10;75!UBERON:0001871;1.79e-10;6!UBERON:0001016;2.37e-10;83!UBERON:0000955;2.38e-10;68!UBERON:0001896;2.08e-09;3!UBERON:0005290;2.08e-09;3!UBERON:0000200;3.16e-08;6!UBERON:0002148;1.23e-07;2!UBERON:0006331;1.23e-07;2!UBERON:0009662;1.23e-07;2!UBERON:0002771;4.57e-07;2!UBERON:0002360;6.38e-07;2!UBERON:0000094;6.38e-07;2!UBERON:0010743;6.38e-07;2!UBERON:0007023;7.44e-07;114|ontology_enrichment_uberon_v019_2=UBERON:0001049,1.59e-31,56;UBERON:0005068,1.59e-31,56;UBERON:0006241,1.59e-31,56;UBERON:0007135,1.59e-31,56;UBERON:0000073,7.76e-31,53;UBERON:0002616,7.76e-31,53;UBERON:0001950,2.53e-28,20;UBERON:0001017,7.98e-27,81;UBERON:0002619,1.57e-25,22;UBERON:0001016,3.44e-25,89;UBERON:0003528,3.01e-23,34;UBERON:0002020,3.01e-23,34;UBERON:0002346,4.40e-23,86;UBERON:0003075,9.03e-23,82;UBERON:0007284,9.03e-23,82;UBERON:0000955,3.50e-22,68;UBERON:0006238,3.50e-22,68;UBERON:0000956,3.78e-22,25;UBERON:0000203,3.78e-22,25;UBERON:0001869,8.61e-22,32;UBERON:0002780,5.66e-21,41;UBERON:0001890,5.66e-21,41;UBERON:0003080,5.66e-21,41;UBERON:0006240,5.66e-21,41;UBERON:0001893,2.68e-20,34;UBERON:0007023,3.34e-20,114;UBERON:0002791,4.42e-19,32;UBERON:0002298,4.08e-18,6;UBERON:0010314,1.97e-17,132;UBERON:0010371,2.07e-16,104;UBERON:0001872,1.43e-14,5;UBERON:0003056,1.20e-12,61;UBERON:0011216,3.99e-12,223;UBERON:0004121,4.30e-12,171;UBERON:0000924,4.30e-12,171;UBERON:0006601,4.30e-12,171;UBERON:0003076,7.59e-12,15;UBERON:0003057,7.59e-12,15;UBERON:0004733,1.65e-11,12;UBERON:0002028,1.65e-11,12;UBERON:0007277,1.65e-11,12;UBERON:0000988,9.11e-11,3;UBERON:0001871,1.05e-10,6;UBERON:0004732,1.53e-10,13;UBERON:0001896,4.21e-09,3;UBERON:0005290,4.21e-09,3;UBERON:0010096,4.21e-09,3;UBERON:0000025,1.35e-08,192;UBERON:0000200,2.46e-08,6;UBERON:0002148,1.16e-07,2;UBERON:0006331,1.16e-07,2;UBERON:0009662,1.16e-07,2;UBERON:0002771,3.48e-07,2;UBERON:0002360,6.03e-07,2;UBERON:0000094,6.03e-07,2;UBERON:0010743,6.03e-07,2|phase1_expression=0.181678379270557,0,0.281908808191942,0,0,0,0,0.631719873426831,0.261185628199839,0,0,0,0,0.247532705920093,0,0.672325146451775,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.200544447470142,0,0,0,0.515151135268373,0,0,0,0.697287110717054,0.411167888021826,0.309706370895104,0,0.768482119587302,0,0.689491361473237,0.645484683583826,0,0.752969358170419,1.09162460023138,0.898893937780338,1.22433556948361,1.28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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=23136 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=3380 | |||
|TSSclassifier=S | |||
|UniProt=Q9Y2J2,F5GX05 | |||
|association_with_transcript=120bp_to_ENST00000342933,ENST00000400111,ENST00000544123,uc010wzh.1_5end | |||
|coexpression_cluster_id=C1 | |||
|description=CAGE_peak_6_at_EPB41L3_5end | |||
|id=chr18:5540384..5540434,- | |||
|ontology_enrichment_celltype=CL:0002057!9.30e-07!42 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.87e-32!115;UBERON:0001049!1.08e-25!57;UBERON:0005068!1.08e-25!57;UBERON:0006241!1.08e-25!57;UBERON:0007135!1.08e-25!57;UBERON:0001017!1.41e-22!82;UBERON:0005743!1.10e-21!86;UBERON:0003075!6.68e-21!86;UBERON:0007284!6.68e-21!86;UBERON:0002346!2.49e-20!90;UBERON:0002616!5.01e-20!59;UBERON:0000073!5.42e-20!94;UBERON:0001016!5.42e-20!94;UBERON:0002780!1.22e-19!41;UBERON:0001890!1.22e-19!41;UBERON:0006240!1.22e-19!41;UBERON:0001950!1.86e-19!20;UBERON:0002619!5.33e-19!22;UBERON:0003080!6.51e-19!42;UBERON:0000955!9.35e-18!69;UBERON:0006238!9.35e-18!69;UBERON:0002020!2.35e-16!34;UBERON:0003528!2.35e-16!34;UBERON:0001893!4.71e-16!34;UBERON:0001869!4.81e-16!32;UBERON:0000956!6.83e-16!25;UBERON:0000203!6.83e-16!25;UBERON:0002791!3.96e-15!33;UBERON:0003056!4.15e-12!61;UBERON:0000025!3.90e-10!194;UBERON:0000467!5.93e-10!625;UBERON:0000480!7.32e-10!626;UBERON:0000153!3.69e-09!129;UBERON:0007811!3.69e-09!129;UBERON:0000922!5.08e-09!612;UBERON:0000468!5.12e-09!659;UBERON:0000923!6.06e-09!604;UBERON:0005291!6.06e-09!604;UBERON:0006598!6.06e-09!604;UBERON:0002532!6.06e-09!604;UBERON:0002050!7.40e-09!605;UBERON:0005423!7.40e-09!605;UBERON:0000062!7.81e-09!511;UBERON:0000033!8.47e-09!123;UBERON:0004121!3.70e-08!169;UBERON:0000924!4.00e-08!173;UBERON:0006601!4.00e-08!173;UBERON:0003076!5.87e-08!15;UBERON:0003057!5.87e-08!15;UBERON:0000477!6.55e-08!286;UBERON:0004111!1.83e-07!241;UBERON:0000200!1.99e-07!6;UBERON:0001871!3.46e-07!7 | |||
|ontology_enrichment_uberon_v019=UBERON:0001950;5.11e-28;20!UBERON:0002619;2.97e-25;22!UBERON:0000956;6.60e-22;25!UBERON:0000203;6.60e-22;25!UBERON:0003528;3.07e-20;34!UBERON:0002020;3.07e-20;34!UBERON:0001869;1.34e-19;32!UBERON:0002298;2.08e-18;6!UBERON:0001893;8.16e-18;34!UBERON:0002791;6.45e-17;32!UBERON:0000073;6.88e-17;53!UBERON:0002616;6.88e-17;53!UBERON:0002780;5.55e-15;41!UBERON:0001890;5.55e-15;41!UBERON:0001872;1.19e-14;5!UBERON:0004733;1.02e-11;12!UBERON:0002028;1.02e-11;12!UBERON:0000988;9.66e-11;3!UBERON:0004732;9.89e-11;13!UBERON:0001017;1.18e-10;75!UBERON:0001871;1.79e-10;6!UBERON:0001016;2.37e-10;83!UBERON:0000955;2.38e-10;68!UBERON:0001896;2.08e-09;3!UBERON:0005290;2.08e-09;3!UBERON:0000200;3.16e-08;6!UBERON:0002148;1.23e-07;2!UBERON:0006331;1.23e-07;2!UBERON:0009662;1.23e-07;2!UBERON:0002771;4.57e-07;2!UBERON:0002360;6.38e-07;2!UBERON:0000094;6.38e-07;2!UBERON:0010743;6.38e-07;2!UBERON:0007023;7.44e-07;114 | |||
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|phase1_expression=0.181678379270557,0,0.281908808191942,0,0,0,0,0.631719873426831,0.261185628199839,0,0,0,0,0.247532705920093,0,0.672325146451775,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.200544447470142,0,0,0,0.515151135268373,0,0,0,0.697287110717054,0.411167888021826,0.309706370895104,0,0.768482119587302,0,0.689491361473237,0.645484683583826,0,0.752969358170419,1.09162460023138,0.898893937780338,1.22433556948361,1.28371610830437,0,0.659702600373432,0.398927315243264,0.426224750532694,0.290209238628584,1.70215567407342,1.24564449799115,0,0.521482918420201,0,0,0.368277635987565,0.316462387440884,0,0,0,0,0,0,0,0.19891667719909,0.182664153764634,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,11.3296900305521,0,0,0,0,0,0,0,0,0.39752481473341,0,0.347140501607594,0,0,0,0,0,0,0,0.805658634218294,3.04108842287405,0,0.367663080345869,0.81014194788176,0,0,0.112611480483322,0,0,0,0,0,0,0,0,0.132409180813219,0,0,0,0,0,0,0,0.163461903113459,0,0,0,0,0,0,0,0,0,0,0,0.206651562351531,0,0,0,0,0,0.375355559615893,0,0,0,0,0,0,0,0,0.300091096084402,0,0,0,0,0,0,0,0,0,0.201504196455281,0,0,0,0,0,0,0,0.310983165046111,0,0,0,0,0,0,0,0,0,0,0,0.217879444092406,0,0,0,0,0,0,0,0,0,0,0.590789906681404,0,0,0.171567810298526,0,0,0,0,0,0,0,0.231860809950154,0,0.288732895522148,0,0.190254152234598,0,0,0.492434012174795,0.936017060556951,6.8370334652815,0,0,0,0,0,0,0,0,0,0,0,0,0,1.17217447210047,0,0,0,0,0,0,1.10007428731425,0,3.57656445851882,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.00451418286425,0,0,0,0,0.289562613335158,0,0,0,0,0,0,0,3.90419561572865,1.54657762555539,0.670065061337395,0.637938751653163,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.413536052245775,0.431428401637234,0,0,0,0,0,0.153461973288062,0,0.128139149255701,0,0,0,0,0.532685175939381,0.246381468041427,0.519254429183621,0.116210378459959,0,0,0,0,0,0,0,0.15403067420883,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.309123034943167,0,0,0,0,0,0,0,0.15350367472613,0.137836572484531,0.214840489736547,0,0.255679882248303,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202182481573316,0,0,0,0.243713489631284,0,0,0,1.13008116620243,0,0,0,0,0,0,0,0,0,0,0,0,0.211107635297664,0,0,0,0,0,0,0.188287601553558,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.1241165257259,0,0.425846237690326,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.984685914873589,0,0,0,0.19924798825107,0,0,0,0,0,0,0,0,2.46608514092334,0,0,0.969332746095218,0.834912883456661,0,0,0,0,0,0,0,0,0,0,0,0.120596438625408,0,0.331737779793674,1.18219047581419,1.31631238292384,0.10893846351899,0,0.307801034015188,0.797594390929008,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.995261931078505,0.973033209536731,3.05515072466813,0,0,0,0.741412462787447,0,6.5594044803095,0,0,0,0.394584402849391,1.20990716048664,2.75465485467441,2.59064976476801,0.450970258243478,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0.193978032976839,0,0,2.74083849293502,2.98071917554485,2.34249945036751,0,0,0,0.19980960958213,0,0,0,0,0,0,0,0,0,0,0,0.136905378891993,0,0,0,0.558564802544508,0,1.43574604915363,0,0.429226048136571,1.11585728720936,0.403100834920358,0,0,0,0,0,0,0,0,0.681017030557878,0,0,0,0,0,2.42998226632099,0,0,0.0524545881349981,0.528001682597033,22.4109174166056,0,0.714695326373367,1.32418394073086,0,0,0,0,0,0,0,0,0.146552233678082,0,6.72271373080063,3.70251284879532,0,0,0.533937062838473,0.157204305099666,0,3.47316215268366,0,0,0,0,0.2506898940227,0,0,0,0.886068179966986,3.53876168215693,0.751145584238999,1.14681839138014,1.10929051536852,2.35966331177257,0,0.124980407962107,0,0,0,0,0,0.298509605773748,0,1.66441758450784,0,0,0,0,0,0.310874401165561,0.295710299979268,0,0,0.155262956876259,0,0,0,0,0,0,0,0,0,0,0,0,0,0,17.14316490625,0,0,0,0,0,0,0,0,0,0,0,0,7.59946751808637,0,1.65910123382077,0.194860308839388,0,0.163565394255844,0,0.245772908753719,0,0,0.106691729694141,0,0,0.184105950251841,0,0,1.66262682694747,0,0,0,0,0,0,0,0.318004350653419,0,0.80057074828547,0.352675943690684,0,1.41304295212211,1.41696576325585,0.319267718114302,1.43581454968528,1.76450187355203,0.829887029570615,2.58361033010962,0,0,0,0,0,0,0,0,0.225630985047772,0.20170506870352,0,0,8.51613971052503,0,2.36381546164381,2.34323429584154,1.03343398250592,1.77564268542939,2.18789923607288,0,0,1.23109871051734,0,0.535701835878287,0.336283722218824,0,0.227662191351298,0.0887023701626388,0,0,14.2736439251347,1.44700101838268,0,0,0.706437835654626,0,0,2.73947616152849,0.215927591218621,0,0.285906176706625,0,0,0,0,0,0,0,0,0,0,0,0,0,1.91107787795487,0,0,0,0,0,0,0,0.467878926924211,0,2.61624199710651,0,0,0,0.694567422971502,0.218559560503957,0,0.245148321753905,0,0.785233868459781,0.594092800654172,4.226557275834,0,0.563903507879121,0.0644578879735772,0,0,0,0,0,0,0,0,1.97175321553653,2.61810414204226,0.5290268405154,0,0,0,0,0,0.126698501011437,0,0,0,0,22.8093881636901,34.2994086599908,4.1458471972939,0.20686599172379,0,0.23806443146374,0.129177819672012,0.248298857183432,0.897054900644907,0.12729431655633,0,0,0,0.0673520530145875,1.21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| |||
|short_description=p6@EPB41L3 | |||
}} |
Revision as of 17:49, 11 September 2013
Short description: | p6@EPB41L3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_6_at_EPB41L3_5end |
Coexpression cluster: | C1_testis_epididymis_embryonic_medulla_pituitary_trachea_caudate |
Association with transcript: | 120bp_to_ENST00000342933, ENST00000400111, ENST00000544123, uc010wzh.1_5end |
EntrezGene: | EPB41L3 |
HGNC: | 3380 |
UniProt: | Q9Y2J2F5GX05 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.