FFCP PHASE1:Hg19::chr19:50831985..50832036,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=3748|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=6235|TSSclassifier=N|UniProt=|association_with_transcript=302bp_to_BC156302_5end|coexpression_cluster_id=C3|description=CAGE_peak_3_at_KCNC3_5end|id=chr19:50831985..50832036,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=CL:0000319;1.35e-07;1|ontology_enrichment_celltype_v019_2=CL:0000319,1.64e-07,1|ontology_enrichment_development_v019=UBERON:0006215;9.35e-21;3!UBERON:0010122;1.64e-13;2!UBERON:0006601;3.14e-13;82!UBERON:0006222;1.35e-07;1|ontology_enrichment_disease=|ontology_enrichment_disease_v019=DOID:0060060;1.35e-07;1!DOID:0060061;1.35e-07;1!DOID:3030;1.35e-07;1!DOID:8691;1.35e-07;1|ontology_enrichment_disease_v019_2=DOID:0060060,1.26e-07,1;DOID:0060061,1.26e-07,1;DOID:8691,1.26e-07,1;DOID:3030,1.64e-07,1|ontology_enrichment_uberon=UBERON:0001049!1.24e-34!57;UBERON:0005068!1.24e-34!57;UBERON:0006241!1.24e-34!57;UBERON:0007135!1.24e-34!57;UBERON:0002616!4.95e-33!59;UBERON:0000955!2.34e-31!69;UBERON:0006238!2.34e-31!69;UBERON:0002780!9.21e-31!41;UBERON:0001890!9.21e-31!41;UBERON:0006240!9.21e-31!41;UBERON:0003080!8.44e-30!42;UBERON:0001017!1.12e-28!82;UBERON:0001869!2.06e-28!32;UBERON:0002020!2.41e-28!34;UBERON:0003528!2.41e-28!34;UBERON:0001893!2.59e-28!34;UBERON:0005743!4.89e-28!86;UBERON:0001950!3.01e-27!20;UBERON:0002619!4.20e-27!22;UBERON:0002791!9.08e-27!33;UBERON:0003075!1.20e-26!86;UBERON:0007284!1.20e-26!86;UBERON:0002346!4.42e-26!90;UBERON:0000073!4.71e-24!94;UBERON:0001016!4.71e-24!94;UBERON:0007023!2.93e-23!115;UBERON:0000956!3.54e-23!25;UBERON:0000203!3.54e-23!25;UBERON:0003056!1.01e-21!61;UBERON:0000153!6.24e-16!129;UBERON:0007811!6.24e-16!129;UBERON:0000033!1.54e-15!123;UBERON:0000924!3.08e-10!173;UBERON:0006601!3.08e-10!173;UBERON:0004121!3.35e-10!169;UBERON:0001871!3.58e-10!7;UBERON:0001872!1.45e-09!5;UBERON:0002021!2.18e-09!5;UBERON:0000025!1.17e-08!194;UBERON:0004733!1.46e-08!12;UBERON:0002028!1.46e-08!12;UBERON:0007277!1.46e-08!12;UBERON:0000369!5.52e-08!4;UBERON:0002435!5.52e-08!4;UBERON:0000204!5.52e-08!4;UBERON:0010082!5.52e-08!4;UBERON:0004732!9.25e-08!13;UBERON:0000200!1.09e-07!6;UBERON:0002680!6.17e-07!9;UBERON:0001895!6.17e-07!9;UBERON:0010092!6.17e-07!9;UBERON:0002420!6.37e-07!9;UBERON:0007245!6.37e-07!9;UBERON:0010009!6.37e-07!9;UBERON:0010011!6.37e-07!9;UBERON:0000454!6.37e-07!9;UBERON:0002308!9.98e-07!9;UBERON:0000125!9.98e-07!9|ontology_enrichment_uberon_v019=UBERON:0001869;1.46e-48;32!UBERON:0001893;1.90e-47;34!UBERON:0003528;1.79e-43;34!UBERON:0002020;1.79e-43;34!UBERON:0002791;1.87e-43;32!UBERON:0001950;6.83e-43;20!UBERON:0002619;5.73e-39;22!UBERON:0000956;3.26e-34;25!UBERON:0000203;3.26e-34;25!UBERON:0000073;5.15e-32;53!UBERON:0002616;5.15e-32;53!UBERON:0002780;2.24e-31;41!UBERON:0001890;2.24e-31;41!UBERON:0000955;5.48e-27;68!UBERON:0000369;1.37e-25;4!UBERON:0002435;1.37e-25;4!UBERON:0000204;1.37e-25;4!UBERON:0001017;3.65e-25;75!UBERON:0002021;1.65e-21;5!UBERON:0001872;3.27e-21;5!UBERON:0005383;2.21e-19;3!UBERON:0005382;2.21e-19;3!UBERON:0004733;3.22e-19;12!UBERON:0002028;3.22e-19;12!UBERON:0002680;2.71e-18;9!UBERON:0001895;2.71e-18;9!UBERON:0001016;9.68e-18;83!UBERON:0004732;1.06e-17;13!UBERON:0000125;1.94e-17;9!UBERON:0002308;1.94e-17;9!UBERON:0009663;9.94e-15;7!UBERON:0007023;2.45e-14;114!UBERON:0001873;1.64e-13;2!UBERON:0002420;1.70e-11;9!UBERON:0007245;1.70e-11;9!UBERON:0010009;1.70e-11;9!UBERON:0010011;1.70e-11;9!UBERON:0000454;1.70e-11;9!UBERON:0000200;1.15e-10;6!UBERON:0002037;1.21e-10;6!UBERON:0002298;3.07e-10;6!UBERON:0000988;1.13e-09;3!UBERON:0011216;1.71e-08;132!UBERON:0002902;2.70e-08;1!UBERON:0009899;2.70e-08;1!UBERON:0002581;2.99e-08;1!UBERON:0007190;3.67e-08;1!UBERON:0001882;5.90e-08;1!UBERON:0002022;5.90e-08;1!UBERON:0005403;5.90e-08;1!UBERON:0001874;1.35e-07;1!UBERON:0003112;1.35e-07;1!UBERON:0011158;1.35e-07;1!UBERON:0003128;1.35e-07;1!UBERON:0001703;1.35e-07;1!UBERON:0002241;1.35e-07;1|ontology_enrichment_uberon_v019_2=UBERON:0000073,4.72e-65,53;UBERON:0002616,4.72e-65,53;UBERON:0001049,2.15e-61,56;UBERON:0005068,2.15e-61,56;UBERON:0006241,2.15e-61,56;UBERON:0007135,2.15e-61,56;UBERON:0000955,2.51e-58,68;UBERON:0006238,2.51e-58,68;UBERON:0001869,6.41e-54,32;UBERON:0001893,1.21e-50,34;UBERON:0003528,2.74e-50,34;UBERON:0002020,2.74e-50,34;UBERON:0001017,1.86e-48,81;UBERON:0002791,1.79e-47,32;UBERON:0002780,7.97e-47,41;UBERON:0001890,7.97e-47,41;UBERON:0003080,7.97e-47,41;UBERON:0006240,7.97e-47,41;UBERON:0001016,2.97e-43,89;UBERON:0001950,5.38e-43,20;UBERON:0003075,9.47e-41,82;UBERON:0007284,9.47e-41,82;UBERON:0002619,4.61e-39,22;UBERON:0002346,1.15e-38,86;UBERON:0007023,7.57e-37,114;UBERON:0000956,2.69e-34,25;UBERON:0000203,2.69e-34,25;UBERON:0010371,2.96e-31,104;UBERON:0003056,1.49e-30,61;UBERON:0010314,6.33e-26,132;UBERON:0000369,9.04e-26,4;UBERON:0002435,9.04e-26,4;UBERON:0000204,9.04e-26,4;UBERON:0010082,9.04e-26,4;UBERON:0002021,1.42e-21,5;UBERON:0001872,3.11e-21,5;UBERON:0004121,1.34e-20,171;UBERON:0000924,1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309476,0.426467963801962,0,0,0.124149428591716,0,0.0636471582781649,0.606351566874658,0,0,0.26940821205835,0,0,0,0,0,0,0,0.122241444182866,0.406896178315738,0,0,0|short_description=p3@KCNC3}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=3748 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6235 | |||
|TSSclassifier=N | |||
|UniProt= | |||
|association_with_transcript=302bp_to_BC156302_5end | |||
|coexpression_cluster_id=C3 | |||
|description=CAGE_peak_3_at_KCNC3_5end | |||
|id=chr19:50831985..50832036,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000319;1.35e-07;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000319,1.64e-07,1 | |||
|ontology_enrichment_development_v019=UBERON:0006215;9.35e-21;3!UBERON:0010122;1.64e-13;2!UBERON:0006601;3.14e-13;82!UBERON:0006222;1.35e-07;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:0060060;1.35e-07;1!DOID:0060061;1.35e-07;1!DOID:3030;1.35e-07;1!DOID:8691;1.35e-07;1 | |||
|ontology_enrichment_disease_v019_2=DOID:0060060,1.26e-07,1;DOID:0060061,1.26e-07,1;DOID:8691,1.26e-07,1;DOID:3030,1.64e-07,1 | |||
|ontology_enrichment_uberon=UBERON:0001049!1.24e-34!57;UBERON:0005068!1.24e-34!57;UBERON:0006241!1.24e-34!57;UBERON:0007135!1.24e-34!57;UBERON:0002616!4.95e-33!59;UBERON:0000955!2.34e-31!69;UBERON:0006238!2.34e-31!69;UBERON:0002780!9.21e-31!41;UBERON:0001890!9.21e-31!41;UBERON:0006240!9.21e-31!41;UBERON:0003080!8.44e-30!42;UBERON:0001017!1.12e-28!82;UBERON:0001869!2.06e-28!32;UBERON:0002020!2.41e-28!34;UBERON:0003528!2.41e-28!34;UBERON:0001893!2.59e-28!34;UBERON:0005743!4.89e-28!86;UBERON:0001950!3.01e-27!20;UBERON:0002619!4.20e-27!22;UBERON:0002791!9.08e-27!33;UBERON:0003075!1.20e-26!86;UBERON:0007284!1.20e-26!86;UBERON:0002346!4.42e-26!90;UBERON:0000073!4.71e-24!94;UBERON:0001016!4.71e-24!94;UBERON:0007023!2.93e-23!115;UBERON:0000956!3.54e-23!25;UBERON:0000203!3.54e-23!25;UBERON:0003056!1.01e-21!61;UBERON:0000153!6.24e-16!129;UBERON:0007811!6.24e-16!129;UBERON:0000033!1.54e-15!123;UBERON:0000924!3.08e-10!173;UBERON:0006601!3.08e-10!173;UBERON:0004121!3.35e-10!169;UBERON:0001871!3.58e-10!7;UBERON:0001872!1.45e-09!5;UBERON:0002021!2.18e-09!5;UBERON:0000025!1.17e-08!194;UBERON:0004733!1.46e-08!12;UBERON:0002028!1.46e-08!12;UBERON:0007277!1.46e-08!12;UBERON:0000369!5.52e-08!4;UBERON:0002435!5.52e-08!4;UBERON:0000204!5.52e-08!4;UBERON:0010082!5.52e-08!4;UBERON:0004732!9.25e-08!13;UBERON:0000200!1.09e-07!6;UBERON:0002680!6.17e-07!9;UBERON:0001895!6.17e-07!9;UBERON:0010092!6.17e-07!9;UBERON:0002420!6.37e-07!9;UBERON:0007245!6.37e-07!9;UBERON:0010009!6.37e-07!9;UBERON:0010011!6.37e-07!9;UBERON:0000454!6.37e-07!9;UBERON:0002308!9.98e-07!9;UBERON:0000125!9.98e-07!9 | |||
|ontology_enrichment_uberon_v019=UBERON:0001869;1.46e-48;32!UBERON:0001893;1.90e-47;34!UBERON:0003528;1.79e-43;34!UBERON:0002020;1.79e-43;34!UBERON:0002791;1.87e-43;32!UBERON:0001950;6.83e-43;20!UBERON:0002619;5.73e-39;22!UBERON:0000956;3.26e-34;25!UBERON:0000203;3.26e-34;25!UBERON:0000073;5.15e-32;53!UBERON:0002616;5.15e-32;53!UBERON:0002780;2.24e-31;41!UBERON:0001890;2.24e-31;41!UBERON:0000955;5.48e-27;68!UBERON:0000369;1.37e-25;4!UBERON:0002435;1.37e-25;4!UBERON:0000204;1.37e-25;4!UBERON:0001017;3.65e-25;75!UBERON:0002021;1.65e-21;5!UBERON:0001872;3.27e-21;5!UBERON:0005383;2.21e-19;3!UBERON:0005382;2.21e-19;3!UBERON:0004733;3.22e-19;12!UBERON:0002028;3.22e-19;12!UBERON:0002680;2.71e-18;9!UBERON:0001895;2.71e-18;9!UBERON:0001016;9.68e-18;83!UBERON:0004732;1.06e-17;13!UBERON:0000125;1.94e-17;9!UBERON:0002308;1.94e-17;9!UBERON:0009663;9.94e-15;7!UBERON:0007023;2.45e-14;114!UBERON:0001873;1.64e-13;2!UBERON:0002420;1.70e-11;9!UBERON:0007245;1.70e-11;9!UBERON:0010009;1.70e-11;9!UBERON:0010011;1.70e-11;9!UBERON:0000454;1.70e-11;9!UBERON:0000200;1.15e-10;6!UBERON:0002037;1.21e-10;6!UBERON:0002298;3.07e-10;6!UBERON:0000988;1.13e-09;3!UBERON:0011216;1.71e-08;132!UBERON:0002902;2.70e-08;1!UBERON:0009899;2.70e-08;1!UBERON:0002581;2.99e-08;1!UBERON:0007190;3.67e-08;1!UBERON:0001882;5.90e-08;1!UBERON:0002022;5.90e-08;1!UBERON:0005403;5.90e-08;1!UBERON:0001874;1.35e-07;1!UBERON:0003112;1.35e-07;1!UBERON:0011158;1.35e-07;1!UBERON:0003128;1.35e-07;1!UBERON:0001703;1.35e-07;1!UBERON:0002241;1.35e-07;1 | |||
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|phase1_expression=0,0.428201047781966,0,0,0,0,0,0,0,0.491467873003018,0,0.218441372130172,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.242584061187816,0,0,0,0,0.256160706529101,0,0,0,0,0,0,0,0,0,0,0,0.199463657621632,0,0,0,0,0,0,0,0,0,0,0,0,0.209658645508376,0,0,0,0.285012743741249,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111410456885174,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.654895377488563,0,0,0,0,0.398873881556595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.24666754841716,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0920498986422993,0,0,0,0,0,0,0,0,0,0.116193942869518,0.10366105501537,0.504641701751257,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171567810298526,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.492434012174795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0.355391948742546,0,0.301439377059586,0,0,0,0,0,0,0,0,0,0,0.179060963239896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157702415033935,0,0,0,0,0,0,0,0,0.343143423810856,0,0.215714200818617,0,0,0,0,0,0.153461973288062,0,0.128139149255701,0,0,0,0,0,0,0,0,0.120859449591622,0.40101294060657,0,0,0,0,0,0,0,0,0.105551628892876,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.62962469366128,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.507447609232169,0,0,0,0,0,0,0,0.320472213382419,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.728163130497081,0,0,0,0,0,0.994147647766298,0.844016498463076,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.84666373047609,2.31920245404628,0,0,0,0,0.1137934482855,0.254253650292766,0,0.344743373241465,0,0,1.77148277162768,1.5677537021303,3.05163472634166,4.75490817704266,5.31985714116385,0.87754158861589,0,0,0,0,0,0.0897576444097721,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163232808159148,0,0,0,0,0,0.889563386041866,1.60633120630454,1.25306339406546,0.134802265961354,0,1.87411556580271,0,0.19566461893209,0,0,0,0.30607276163049,0.063186579628488,0.150323419414493,0,0,0,0,0,0,0.138674673013139,0,0,0,0,0.171986032471617,0,0,0,0,0,0.677942222341597,0,0,3.60871536948509,0.586654148204409,0,0,0.39961921916426,0.288180834308212,0.114536596165916,0.171594997861965,0,0,0,0,0,0,0,0,0,0,0,0.262887354279314,0,0,0,0.399358000997982,0,0,0.0671834724867263,0,0,0.0787831823072236,0.0824158583811665,0.13480708770837,0,0,0,0.544813624446302,0,0,0.415440338029185,0,0,3.52347428616543,0,0,0.209818352539992,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.0342636508924,0.26446520348538,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.80660409274515,0.3755727921195,0,0.443716206147409,1.17983165588629,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.521745061811734,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.829550616910385,0,0,0.163565394255844,0,1.2288645437686,0,1.59989916683944,0,0,0,0,0.139879507719444,0,0,0,0,0,0,0,0.123935764259002,0,0,0,0,0,0,3.14723202972652,5.6678630530234,1.75597244962866,3.28186182785208,0.252071696221718,8.78297106295567,1.13032951942296,0,0,0,0,0,0,0,0,0,0.40341013740704,0,0.261906694481422,0,0,5.67315710794515,1.56215619722769,2.06686796501184,3.93178023202222,0.546974809018219,0,0,0,0,0,0,0.606965604236632,0.91064876540519,0,0.230467975111559,0,5.70945757005386,6.90614122409915,0,0,0,1.72827148907602,0,0,0,0,0.142953088353313,0.632054446930906,0,0,0,0,0,0,0,0,0,0.423387050190929,0,0,0,0.111855431797792,0,0,0,0,0,0,0.233939463462106,0.397901550322736,0.118920090777569,0,0,0.301925687133347,0,0,0.470317296361523,0,0,0,0,0,0,0,0.0644578879735772,0,0,0,0,0,0,0,0.157771562193185,6.05124262699141,0.436350690340377,0,0,0,0,0,0,0,0.101988829741982,0,0.18378979906969,0,0.0757786982182394,0.267964130156178,0,0.517164979309476,0.426467963801962,0,0,0.124149428591716,0,0.0636471582781649,0.606351566874658,0,0,0.26940821205835,0,0,0,0,0,0,0,0.122241444182866,0.406896178315738,0,0,0 | |||
|short_description=p3@KCNC3 | |||
}} |
Revision as of 21:54, 11 September 2013
Short description: | p3@KCNC3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_KCNC3_5end |
Coexpression cluster: | C3_occipital_temporal_insula_medial_postcentral_frontal_amygdala |
Association with transcript: | 302bp_to_BC156302_5end |
EntrezGene: | KCNC3 |
HGNC: | 6235 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mucus secreting cell | 1.64e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
non-Hodgkin lymphoma | 1.26e-07 | 1 |
cutaneous T cell lymphoma | 1.26e-07 | 1 |
mycosis fungoides | 1.26e-07 | 1 |
mucinous adenocarcinoma | 1.64e-07 | 1 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.