FFCP PHASE1:Mm9::chr12:14158877..14158888,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=105005|HGNC=|MCL_coexpression_id=60|UniProt=Q9D650|association_with_transcript=-33bp_to_ENSMUST00000020926,NM_029007,uc007nbn.1_5end|description=CAGE_peak_2_at_Fam84a_5end|id=chr12:14158877..14158888,-|ontology_enrichment_celltype=CL:0000117!2.76e-13!23;CL:0000337!2.76e-13!23|ontology_enrichment_celltype_v019_2=CL:0000117,2.38e-22,23;CL:0000337,2.38e-22,23;CL:0002319,5.77e-14,43;CL:0000540,9.56e-14,33;CL:0000047,9.56e-14,33;CL:0000031,9.56e-14,33;CL:0000404,9.56e-14,33;CL:0000221,1.72e-13,44;CL:0000133,1.72e-13,44;CL:0000393,9.54e-11,39;CL:0000211,9.54e-11,39;CL:0002321,3.55e-08,70|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002020!5.55e-21!34;UBERON:0001049!2.18e-20!52;UBERON:0005068!2.18e-20!52;UBERON:0006241!2.18e-20!52;UBERON:0007135!2.18e-20!52;UBERON:0000955!3.05e-19!50;UBERON:0006238!3.05e-19!50;UBERON:0002616!1.60e-18!49;UBERON:0001017!2.41e-18!73;UBERON:0005743!2.41e-18!73;UBERON:0002791!7.05e-18!29;UBERON:0003528!7.05e-18!29;UBERON:0001893!7.05e-18!29;UBERON:0000073!4.53e-17!75;UBERON:0001016!4.53e-17!75;UBERON:0000033!3.77e-16!63;UBERON:0003080!2.68e-15!40;UBERON:0002780!1.24e-14!39;UBERON:0001890!1.24e-14!39;UBERON:0006240!1.24e-14!39;UBERON:0002346!6.08e-14!71;UBERON:0003075!6.08e-14!71;UBERON:0007284!6.08e-14!71;UBERON:0000956!1.63e-13!21;UBERON:0001869!1.63e-13!21;UBERON:0000203!1.63e-13!21;UBERON:0004121!1.90e-13!102;UBERON:0000924!1.90e-13!102;UBERON:0006601!1.90e-13!102;UBERON:0003056!7.62e-13!49;UBERON:0002619!1.69e-11!17;UBERON:0002021!3.19e-08!10;UBERON:0000411!3.19e-08!10;UBERON:0001950!3.19e-08!10|ontology_enrichment_uberon_v019_2=UBERON:0000073,3.01e-37,54;UBERON:0002020,2.11e-36,34;UBERON:0001017,3.52e-36,73;UBERON:0001016,7.36e-35,75;UBERON:0001049,1.01e-34,52;UBERON:0005068,1.01e-34,52;UBERON:0006241,1.01e-34,52;UBERON:0007135,1.01e-34,52;UBERON:0003528,5.05e-30,29;UBERON:0002791,5.05e-30,29;UBERON:0001893,5.05e-30,29;UBERON:0000955,4.86e-29,47;UBERON:0006238,4.86e-29,47;UBERON:0002616,1.19e-27,46;UBERON:0002346,4.60e-26,64;UBERON:0003075,4.60e-26,64;UBERON:0007284,4.60e-26,64;UBERON:0003080,2.77e-25,40;UBERON:0004121,1.00e-24,95;UBERON:0000924,1.00e-24,95;UBERON:0006601,1.00e-24,95;UBERON:0002780,5.70e-24,39;UBERON:0001890,5.70e-24,39;UBERON:0006240,5.70e-24,39;UBERON:0000956,1.38e-22,21;UBERON:0001869,1.38e-22,21;UBERON:0000203,1.38e-22,21;UBERON:0010371,1.86e-21,73;UBERON:0002619,1.88e-20,17;UBERON:0003056,5.12e-19,49;UBERON:0002021,2.07e-15,10;UBERON:0000411,2.07e-15,10;UBERON:0001950,2.07e-15,10;UBERON:0010314,9.57e-15,92;UBERON:0000025,1.34e-10,114;UBERON:0004111,7.49e-10,122;UBERON:0003076,1.38e-09,12;UBERON:0003057,1.38e-09,12;UBERON:0011216,6.24e-09,194;UBERON:0002420,1.97e-08,8;UBERON:0007245,1.97e-08,8;UBERON:0010009,1.97e-08,8;UBERON:0010011,1.97e-08,8;UBERON:0000454,1.97e-08,8;UBERON:0002240,3.38e-08,6;UBERON:0005174,3.38e-08,6;UBERON:0001137,3.38e-08,6;UBERON:0000369,1.09e-07,5;UBERON:0002435,1.09e-07,5;UBERON:0000204,1.09e-07,5;UBERON:0010082,1.09e-07,5;UBERON:0001948,2.23e-07,5;UBERON:0002315,2.23e-07,5;UBERON:0001954,8.29e-07,7;UBERON:0003022,8.29e-07,7;UBERON:0002421,8.29e-07,7;UBERON:0000349,8.29e-07,7;UBERON:0002600,8.29e-07,7|phase1_expression=0.320297694209588,1.74487703819681,0,1.81478526784098,0.500895729946347,0.33575854382378,0.467225281191051,0,0,0,0,0,0,0,0,0,0,0.157731082679119,0,0,3.06155844543851,0,0,0.799962113967033,0.22940928106717,3.44539178469012,0.430761996159075,0.430942465371778,0.760093677825496,0.756090389279792,0.886922042621219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.74420125104357,2.19686182734472,0.58328969722285,0.699932108126813,0,0,0,0,0,0,0.515672092277442,1.82084814773638,3.1739458756322,2.53532561402472,0,1.77858959222228,0,0,0,1.19840044207362,2.68952813725088,0.829516898467821,2.16009501330705,2.10324961351382,2.28520787523043,3.3130281142742,2.20483438586917,1.43768206527355,4.5960939330501,2.20231761998777,2.42605942361857,1.99688493233117,2.2420668914133,2.56165402086747,2.6045668527838,0.558365998002762,2.8138130501584,1.83357897332172,3.24091444021034,1.99320353118744,2.60959224155421,0,0,0,0,0,0,0,0,0.421333260395256,0,0,0,0.281686839553361,0,0,0,0.432982082022428,0.506719730950197,1.01104889002957,0.79928715803342,0,0.148442139064825,0,0.608930956624282,0,0.150722640552623,0.352766121407114,0,0,0.144599356919912,0,0,0,0,0,0.878342391034642,1.04723353406728,0.255457055208591,0,0,0,3.89455662452539,5.49000723382352,3.14135880282161,4.17178368461463,4.09144731728529,1.87009240103604,2.92034273521964,0.305518091550949,0.497627882440372,1.76905930903572,0.210441855886474,0,0.229902104433473,0.180062129805349,0.30140963567143,0.204109497453984,0.2562274405697,0.187403449119458,0,0.215567992932842,0.189106080167819,0.527853372491847,0.43839146485515,0,0,0,0.199034266818493,0,0,0,0,0,0,0.473489471170421,0,0,0,0.268273401399619,0,0,0,0.162137619091711,0.146199987425332,0.439100230582101,0.134206418760372,6.09840850835969,1.02904612379284,0.660837565967596,1.322252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| ||
|EntrezGene=105005 | |||
|HGNC= | |||
|MCL_coexpression_id=60 | |||
|UniProt=Q9D650 | |||
|association_with_transcript=-33bp_to_ENSMUST00000020926,NM_029007,uc007nbn.1_5end | |||
|description=CAGE_peak_2_at_Fam84a_5end | |||
|id=chr12:14158877..14158888,- | |||
|ontology_enrichment_celltype=CL:0000117!2.76e-13!23;CL:0000337!2.76e-13!23 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,2.38e-22,23;CL:0000337,2.38e-22,23;CL:0002319,5.77e-14,43;CL:0000540,9.56e-14,33;CL:0000047,9.56e-14,33;CL:0000031,9.56e-14,33;CL:0000404,9.56e-14,33;CL:0000221,1.72e-13,44;CL:0000133,1.72e-13,44;CL:0000393,9.54e-11,39;CL:0000211,9.54e-11,39;CL:0002321,3.55e-08,70 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002020!5.55e-21!34;UBERON:0001049!2.18e-20!52;UBERON:0005068!2.18e-20!52;UBERON:0006241!2.18e-20!52;UBERON:0007135!2.18e-20!52;UBERON:0000955!3.05e-19!50;UBERON:0006238!3.05e-19!50;UBERON:0002616!1.60e-18!49;UBERON:0001017!2.41e-18!73;UBERON:0005743!2.41e-18!73;UBERON:0002791!7.05e-18!29;UBERON:0003528!7.05e-18!29;UBERON:0001893!7.05e-18!29;UBERON:0000073!4.53e-17!75;UBERON:0001016!4.53e-17!75;UBERON:0000033!3.77e-16!63;UBERON:0003080!2.68e-15!40;UBERON:0002780!1.24e-14!39;UBERON:0001890!1.24e-14!39;UBERON:0006240!1.24e-14!39;UBERON:0002346!6.08e-14!71;UBERON:0003075!6.08e-14!71;UBERON:0007284!6.08e-14!71;UBERON:0000956!1.63e-13!21;UBERON:0001869!1.63e-13!21;UBERON:0000203!1.63e-13!21;UBERON:0004121!1.90e-13!102;UBERON:0000924!1.90e-13!102;UBERON:0006601!1.90e-13!102;UBERON:0003056!7.62e-13!49;UBERON:0002619!1.69e-11!17;UBERON:0002021!3.19e-08!10;UBERON:0000411!3.19e-08!10;UBERON:0001950!3.19e-08!10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,3.01e-37,54;UBERON:0002020,2.11e-36,34;UBERON:0001017,3.52e-36,73;UBERON:0001016,7.36e-35,75;UBERON:0001049,1.01e-34,52;UBERON:0005068,1.01e-34,52;UBERON:0006241,1.01e-34,52;UBERON:0007135,1.01e-34,52;UBERON:0003528,5.05e-30,29;UBERON:0002791,5.05e-30,29;UBERON:0001893,5.05e-30,29;UBERON:0000955,4.86e-29,47;UBERON:0006238,4.86e-29,47;UBERON:0002616,1.19e-27,46;UBERON:0002346,4.60e-26,64;UBERON:0003075,4.60e-26,64;UBERON:0007284,4.60e-26,64;UBERON:0003080,2.77e-25,40;UBERON:0004121,1.00e-24,95;UBERON:0000924,1.00e-24,95;UBERON:0006601,1.00e-24,95;UBERON:0002780,5.70e-24,39;UBERON:0001890,5.70e-24,39;UBERON:0006240,5.70e-24,39;UBERON:0000956,1.38e-22,21;UBERON:0001869,1.38e-22,21;UBERON:0000203,1.38e-22,21;UBERON:0010371,1.86e-21,73;UBERON:0002619,1.88e-20,17;UBERON:0003056,5.12e-19,49;UBERON:0002021,2.07e-15,10;UBERON:0000411,2.07e-15,10;UBERON:0001950,2.07e-15,10;UBERON:0010314,9.57e-15,92;UBERON:0000025,1.34e-10,114;UBERON:0004111,7.49e-10,122;UBERON:0003076,1.38e-09,12;UBERON:0003057,1.38e-09,12;UBERON:0011216,6.24e-09,194;UBERON:0002420,1.97e-08,8;UBERON:0007245,1.97e-08,8;UBERON:0010009,1.97e-08,8;UBERON:0010011,1.97e-08,8;UBERON:0000454,1.97e-08,8;UBERON:0002240,3.38e-08,6;UBERON:0005174,3.38e-08,6;UBERON:0001137,3.38e-08,6;UBERON:0000369,1.09e-07,5;UBERON:0002435,1.09e-07,5;UBERON:0000204,1.09e-07,5;UBERON:0010082,1.09e-07,5;UBERON:0001948,2.23e-07,5;UBERON:0002315,2.23e-07,5;UBERON:0001954,8.29e-07,7;UBERON:0003022,8.29e-07,7;UBERON:0002421,8.29e-07,7;UBERON:0000349,8.29e-07,7;UBERON:0002600,8.29e-07,7 | |||
|phase1_expression=0.320297694209588,1.74487703819681,0,1.81478526784098,0.500895729946347,0.33575854382378,0.467225281191051,0,0,0,0,0,0,0,0,0,0,0.157731082679119,0,0,3.06155844543851,0,0,0.799962113967033,0.22940928106717,3.44539178469012,0.430761996159075,0.430942465371778,0.760093677825496,0.756090389279792,0.886922042621219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.74420125104357,2.19686182734472,0.58328969722285,0.699932108126813,0,0,0,0,0,0,0.515672092277442,1.82084814773638,3.1739458756322,2.53532561402472,0,1.77858959222228,0,0,0,1.19840044207362,2.68952813725088,0.829516898467821,2.16009501330705,2.10324961351382,2.28520787523043,3.3130281142742,2.20483438586917,1.43768206527355,4.5960939330501,2.20231761998777,2.42605942361857,1.99688493233117,2.2420668914133,2.56165402086747,2.6045668527838,0.558365998002762,2.8138130501584,1.83357897332172,3.24091444021034,1.99320353118744,2.60959224155421,0,0,0,0,0,0,0,0,0.421333260395256,0,0,0,0.281686839553361,0,0,0,0.432982082022428,0.506719730950197,1.01104889002957,0.79928715803342,0,0.148442139064825,0,0.608930956624282,0,0.150722640552623,0.352766121407114,0,0,0.144599356919912,0,0,0,0,0,0.878342391034642,1.04723353406728,0.255457055208591,0,0,0,3.89455662452539,5.49000723382352,3.14135880282161,4.17178368461463,4.09144731728529,1.87009240103604,2.92034273521964,0.305518091550949,0.497627882440372,1.76905930903572,0.210441855886474,0,0.229902104433473,0.180062129805349,0.30140963567143,0.204109497453984,0.2562274405697,0.187403449119458,0,0.215567992932842,0.189106080167819,0.527853372491847,0.43839146485515,0,0,0,0.199034266818493,0,0,0,0,0,0,0.473489471170421,0,0,0,0.268273401399619,0,0,0,0.162137619091711,0.146199987425332,0.439100230582101,0.134206418760372,6.09840850835969,1.02904612379284,0.660837565967596,1.32225283331772,0,0,0,0.201683524623343,0.22237804384487,0.760902504450237,0.474529061544512,0.494096864172033,0.754005626400808,0.397912944082302,0.779856348476481,0,0,0.995706366271836,0,0.114248512609729,0,0,0.387904974335251,0.0701358198903186,0.126473074248515,0.442830443938806,0.156998727841375,0.740382983530803,0,0,0,0,0,0.241177159752417,0,0,0.324270453550071,0,0,0,0,0,0.358794827043824,0,0.184753190166605,0.189491411770485,0.162964976442026,0,0,0.335012514883631,0,0.195133647857799,0.472905432318573,0.44292937929755,0.159454768657487,0.327726629431476,0.172684981865896,0.144649058581512,0,0,0,0,2.56880943980467,2.10981035865966,0,0,0,0,0,0,0,0,0,0,0,4.81981974632711,0.283880170416537,0.534196811001766,0.162886959353576,0.329940245945071,0,0,0,0.377210159511796,0,0,0.258428293168221,0,0,0,0,0,0,0.18006109403131,0.517434735131018,0,0.354680467284547,0.356737635204141,0,0,0,0,0.220528398054962,0.8244312647074,0.322928853391811,0.301564624640779,0.716234064018819,0.328281799490123,2.04036585640896,1.48340241608408,0,0.206386867963223,0,0.188368457004691,0,0,0,0,0,0,0.158167996790568,0,0.216010681643603,0.627264888043406,1.09181281873089,0.404593039154462,0.330613822901344,0,0,0,12.9649375897364,0,0,0,0.645799117388655,0,0.234714477291508,0.39061315453185,1.25831213310853,3.62376181239009,5.76060012515731,0,0,0,0,0,0,0.120195449519969,0,0,0,0,0,0,0,0.453460767230423,0,0.0897138566094757,0,0.772758376128762,0,0.549454872801795,0,1.00314420807073,4.51801474093653,5.06357760157895,1.71868654031819,3.60891682921744,5.48066015816514,5.2877572817279,2.70009000092722,8.10578165803597,6.34399372577886,8.80192529978094,0.518936737920883,1.19707462020309,0.682934423016537,0.243106717068294,1.04806581313991,0.367687016900028,0.222246727801615,0.824140228955577,0.962757628775446,0.252697211763798,0.760437899670719,0.565879024158229,0.280924522409647,0.320125762024346,0.34461281373368,0.476293691283074,0.463537303779422,0.192909220463705,0,0.735994600671987,0.685738504770831,0.177475806159338,0.715308569841963,0.581385666529314,0.752875043322645,0.676916863133412,0,0,0.814824683075171,0,0.237270036248348,0.591026894253381,0,0.619747364743864,0.578719832943424,0.999242311751784,0.467863216890817,0.429742108096597,0.765153328275374,0,0 | |||
|short_description=p2@Fam84a | |||
}} |
Revision as of 22:33, 12 September 2013
Short description: | p2@Fam84a |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Fam84a_5end |
Coexpression cluster: | MCL_coexpression_mm9:60 |
Association with transcript: | -33bp_to_ENSMUST00000020926, NM_029007, uc007nbn.1_5end |
EntrezGene: | Fam84a |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 2.38e-22 | 23 |
neuroblast (sensu Vertebrata) | 2.38e-22 | 23 |
neural cell | 5.77e-14 | 43 |
neuron | 9.56e-14 | 33 |
neuronal stem cell | 9.56e-14 | 33 |
neuroblast | 9.56e-14 | 33 |
electrically signaling cell | 9.56e-14 | 33 |
ectodermal cell | 1.72e-13 | 44 |
neurectodermal cell | 1.72e-13 | 44 |
electrically responsive cell | 9.54e-11 | 39 |
electrically active cell | 9.54e-11 | 39 |
embryonic cell | 3.55e-08 | 70 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.