FFCP PHASE1:Mm9::chr15:103333681..103333690,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=18574|HGNC=|MCL_coexpression_id=90|UniProt=Q01065|association_with_transcript=-38bp_to_ENSMUST00000023132,NM_008800,uc007xyh.1_5end|description=CAGE_peak_7_at_Pde1b_5end|id=chr15:103333681..103333690,+|ontology_enrichment_celltype=CL:0000117!3.75e-22!23;CL:0000337!3.75e-22!23;CL:0000540!2.46e-15!33;CL:0000047!2.46e-15!33;CL:0000031!2.46e-15!33;CL:0000404!2.46e-15!33;CL:0002319!6.14e-13!43;CL:0000221!1.67e-12!44;CL:0000133!1.67e-12!44;CL:0000393!4.28e-12!39;CL:0000211!4.28e-12!39;CL:0000055!2.83e-10!50|ontology_enrichment_celltype_v019_2=CL:0002610,1.08e-12,3;CL:0002614,3.52e-12,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!8.95e-36!73;UBERON:0005743!8.95e-36!73;UBERON:0002020!1.14e-35!34;UBERON:0000073!1.71e-34!75;UBERON:0001016!1.71e-34!75;UBERON:0001049!8.85e-33!52;UBERON:0005068!8.85e-33!52;UBERON:0006241!8.85e-33!52;UBERON:0007135!8.85e-33!52;UBERON:0000955!7.33e-31!50;UBERON:0006238!7.33e-31!50;UBERON:0002616!1.36e-29!49;UBERON:0002791!3.46e-29!29;UBERON:0003528!3.46e-29!29;UBERON:0001893!3.46e-29!29;UBERON:0000033!1.89e-28!63;UBERON:0004121!4.36e-27!102;UBERON:0000924!4.36e-27!102;UBERON:0006601!4.36e-27!102;UBERON:0002346!8.48e-27!71;UBERON:0003075!8.48e-27!71;UBERON:0007284!8.48e-27!71;UBERON:0003056!1.16e-25!49;UBERON:0003080!1.24e-25!40;UBERON:0002780!3.11e-24!39;UBERON:0001890!3.11e-24!39;UBERON:0006240!3.11e-24!39;UBERON:0007811!4.33e-19!86;UBERON:0000956!2.24e-18!21;UBERON:0001869!2.24e-18!21;UBERON:0000203!2.24e-18!21;UBERON:0000153!1.25e-17!94;UBERON:0002021!1.31e-15!10;UBERON:0000411!1.31e-15!10;UBERON:0001950!1.31e-15!10;UBERON:0002619!1.05e-13!17;UBERON:0002420!3.95e-12!8;UBERON:0007245!3.95e-12!8;UBERON:0010009!3.95e-12!8;UBERON:0010011!3.95e-12!8;UBERON:0000454!3.95e-12!8;UBERON:0002298!1.55e-10!6;UBERON:0000025!3.11e-10!114;UBERON:0004111!6.25e-09!122;UBERON:0002240!7.18e-09!6;UBERON:0005174!7.18e-09!6;UBERON:0001137!7.18e-09!6;UBERON:0000369!7.73e-08!5;UBERON:0002435!7.73e-08!5;UBERON:0000204!7.73e-08!5;UBERON:0010082!7.73e-08!5;UBERON:0001948!1.63e-07!5;UBERON:0002315!1.63e-07!5;UBERON:0003076!1.86e-07!12;UBERON:0003057!1.86e-07!12;UBERON:0002950!2.34e-07!4;UBERON:0001891!2.34e-07!4;UBERON:0009616!2.34e-07!4;UBERON:0000064!4.21e-07!99|ontology_enrichment_uberon_v019_2=UBERON:0000073,2.78e-27,54;UBERON:0002616,5.40e-23,46;UBERON:0001049,1.60e-22,52;UBERON:0005068,1.60e-22,52;UBERON:0006241,1.60e-22,52;UBERON:0007135,1.60e-22,52;UBERON:0000955,1.92e-22,47;UBERON:0006238,1.92e-22,47;UBERON:0001017,1.65e-21,73;UBERON:0001016,7.52e-21,75;UBERON:0003080,1.87e-20,40;UBERON:0002780,3.33e-18,39;UBERON:0001890,3.33e-18,39;UBERON:0006240,3.33e-18,39;UBERON:0003528,4.60e-18,29;UBERON:0002791,4.60e-18,29;UBERON:0001893,4.60e-18,29;UBERON:0002346,9.77e-18,64;UBERON:0003075,9.77e-18,64;UBERON:0007284,9.77e-18,64;UBERON:0003056,3.20e-16,49;UBERON:0002950,8.13e-16,4;UBERON:0001891,8.13e-16,4;UBERON:0009616,8.13e-16,4;UBERON:0010286,8.13e-16,4;UBERON:0004121,8.87e-16,95;UBERON:0000924,8.87e-16,95;UBERON:0006601,8.87e-16,95;UBERON:0010371,3.56e-15,73;UBERON:0002020,4.13e-15,34;UBERON:0004684,1.08e-12,3;UBERON:0002275,1.08e-12,3;UBERON:0002420,2.73e-12,8;UBERON:0007245,2.73e-12,8;UBERON:0010009,2.73e-12,8;UBERON:0010011,2.73e-12,8;UBERON:0000454,2.73e-12,8;UBERON:0002038,3.52e-12,3;UBERON:0009663,3.52e-12,3;UBERON:0009661,3.52e-12,3;UBERON:0000125,3.52e-12,3;UBERON:0002308,3.52e-12,3;UBERON:0010314,2.10e-11,92;UBERON:0002021,3.97e-10,10;UBERON:0000411,3.97e-10,10;UBERON:0001950,3.97e-10,10;UBERON:0001896,1.83e-09,2;UBERON:0002298,1.83e-09,2;UBERON:0005290,1.83e-09,2;UBERON:0010096,1.83e-09,2;UBERON:0000956,8.26e-09,21;UBERON:0001869,8.26e-09,21;UBERON:0000203,8.26e-09,21;UBERON:0000025,1.35e-08,114;UBERON:0002619,3.83e-08,17;UBERON:0004111,8.01e-08,122|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.595303031057488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.809265843438391,0,0.633831403506179,0,0,0,0,0,0.299600110518405,0.384218305321555,0.311068836925433,0.135005938331691,0.420649922702764,0.285650984403804,0.662605622854841,0,0.0958454710182364,0,2.20231761998777,1.65993539510744,1.22885226604995,0.263772575460388,0.274462930807229,0.52091337055676,1.67509799400829,1.12552522006336,1.22238598221448,0.589257170947335,0.427115042397309,0.745597783301202,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.64769703345305,16.0125210986519,1.13088916901578,3.12883776346098,2.55715457330331,3.32460871295296,5.19172041816825,0,0,0,0.210441855886474,0,0,0,0,0.136072998302656,0.12811372028485,0.0937017245597288,0,0,0,0.175951124163949,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146199987425332,0,0,1.26173969138476,0.411618449517138,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.56880943980467,1.87538698547525,0,0,0,0,0,0,0,0,0,0,0.395287777946524,0.642642632843614,0,0,0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| ||
|EntrezGene=18574 | |||
|HGNC= | |||
|MCL_coexpression_id=90 | |||
|UniProt=Q01065 | |||
|association_with_transcript=-38bp_to_ENSMUST00000023132,NM_008800,uc007xyh.1_5end | |||
|description=CAGE_peak_7_at_Pde1b_5end | |||
|id=chr15:103333681..103333690,+ | |||
|ontology_enrichment_celltype=CL:0000117!3.75e-22!23;CL:0000337!3.75e-22!23;CL:0000540!2.46e-15!33;CL:0000047!2.46e-15!33;CL:0000031!2.46e-15!33;CL:0000404!2.46e-15!33;CL:0002319!6.14e-13!43;CL:0000221!1.67e-12!44;CL:0000133!1.67e-12!44;CL:0000393!4.28e-12!39;CL:0000211!4.28e-12!39;CL:0000055!2.83e-10!50 | |||
|ontology_enrichment_celltype_v019_2=CL:0002610,1.08e-12,3;CL:0002614,3.52e-12,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!8.95e-36!73;UBERON:0005743!8.95e-36!73;UBERON:0002020!1.14e-35!34;UBERON:0000073!1.71e-34!75;UBERON:0001016!1.71e-34!75;UBERON:0001049!8.85e-33!52;UBERON:0005068!8.85e-33!52;UBERON:0006241!8.85e-33!52;UBERON:0007135!8.85e-33!52;UBERON:0000955!7.33e-31!50;UBERON:0006238!7.33e-31!50;UBERON:0002616!1.36e-29!49;UBERON:0002791!3.46e-29!29;UBERON:0003528!3.46e-29!29;UBERON:0001893!3.46e-29!29;UBERON:0000033!1.89e-28!63;UBERON:0004121!4.36e-27!102;UBERON:0000924!4.36e-27!102;UBERON:0006601!4.36e-27!102;UBERON:0002346!8.48e-27!71;UBERON:0003075!8.48e-27!71;UBERON:0007284!8.48e-27!71;UBERON:0003056!1.16e-25!49;UBERON:0003080!1.24e-25!40;UBERON:0002780!3.11e-24!39;UBERON:0001890!3.11e-24!39;UBERON:0006240!3.11e-24!39;UBERON:0007811!4.33e-19!86;UBERON:0000956!2.24e-18!21;UBERON:0001869!2.24e-18!21;UBERON:0000203!2.24e-18!21;UBERON:0000153!1.25e-17!94;UBERON:0002021!1.31e-15!10;UBERON:0000411!1.31e-15!10;UBERON:0001950!1.31e-15!10;UBERON:0002619!1.05e-13!17;UBERON:0002420!3.95e-12!8;UBERON:0007245!3.95e-12!8;UBERON:0010009!3.95e-12!8;UBERON:0010011!3.95e-12!8;UBERON:0000454!3.95e-12!8;UBERON:0002298!1.55e-10!6;UBERON:0000025!3.11e-10!114;UBERON:0004111!6.25e-09!122;UBERON:0002240!7.18e-09!6;UBERON:0005174!7.18e-09!6;UBERON:0001137!7.18e-09!6;UBERON:0000369!7.73e-08!5;UBERON:0002435!7.73e-08!5;UBERON:0000204!7.73e-08!5;UBERON:0010082!7.73e-08!5;UBERON:0001948!1.63e-07!5;UBERON:0002315!1.63e-07!5;UBERON:0003076!1.86e-07!12;UBERON:0003057!1.86e-07!12;UBERON:0002950!2.34e-07!4;UBERON:0001891!2.34e-07!4;UBERON:0009616!2.34e-07!4;UBERON:0000064!4.21e-07!99 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,2.78e-27,54;UBERON:0002616,5.40e-23,46;UBERON:0001049,1.60e-22,52;UBERON:0005068,1.60e-22,52;UBERON:0006241,1.60e-22,52;UBERON:0007135,1.60e-22,52;UBERON:0000955,1.92e-22,47;UBERON:0006238,1.92e-22,47;UBERON:0001017,1.65e-21,73;UBERON:0001016,7.52e-21,75;UBERON:0003080,1.87e-20,40;UBERON:0002780,3.33e-18,39;UBERON:0001890,3.33e-18,39;UBERON:0006240,3.33e-18,39;UBERON:0003528,4.60e-18,29;UBERON:0002791,4.60e-18,29;UBERON:0001893,4.60e-18,29;UBERON:0002346,9.77e-18,64;UBERON:0003075,9.77e-18,64;UBERON:0007284,9.77e-18,64;UBERON:0003056,3.20e-16,49;UBERON:0002950,8.13e-16,4;UBERON:0001891,8.13e-16,4;UBERON:0009616,8.13e-16,4;UBERON:0010286,8.13e-16,4;UBERON:0004121,8.87e-16,95;UBERON:0000924,8.87e-16,95;UBERON:0006601,8.87e-16,95;UBERON:0010371,3.56e-15,73;UBERON:0002020,4.13e-15,34;UBERON:0004684,1.08e-12,3;UBERON:0002275,1.08e-12,3;UBERON:0002420,2.73e-12,8;UBERON:0007245,2.73e-12,8;UBERON:0010009,2.73e-12,8;UBERON:0010011,2.73e-12,8;UBERON:0000454,2.73e-12,8;UBERON:0002038,3.52e-12,3;UBERON:0009663,3.52e-12,3;UBERON:0009661,3.52e-12,3;UBERON:0000125,3.52e-12,3;UBERON:0002308,3.52e-12,3;UBERON:0010314,2.10e-11,92;UBERON:0002021,3.97e-10,10;UBERON:0000411,3.97e-10,10;UBERON:0001950,3.97e-10,10;UBERON:0001896,1.83e-09,2;UBERON:0002298,1.83e-09,2;UBERON:0005290,1.83e-09,2;UBERON:0010096,1.83e-09,2;UBERON:0000956,8.26e-09,21;UBERON:0001869,8.26e-09,21;UBERON:0000203,8.26e-09,21;UBERON:0000025,1.35e-08,114;UBERON:0002619,3.83e-08,17;UBERON:0004111,8.01e-08,122 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.595303031057488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.809265843438391,0,0.633831403506179,0,0,0,0,0,0.299600110518405,0.384218305321555,0.311068836925433,0.135005938331691,0.420649922702764,0.285650984403804,0.662605622854841,0,0.0958454710182364,0,2.20231761998777,1.65993539510744,1.22885226604995,0.263772575460388,0.274462930807229,0.52091337055676,1.67509799400829,1.12552522006336,1.22238598221448,0.589257170947335,0.427115042397309,0.745597783301202,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.64769703345305,16.0125210986519,1.13088916901578,3.12883776346098,2.55715457330331,3.32460871295296,5.19172041816825,0,0,0,0.210441855886474,0,0,0,0,0.136072998302656,0.12811372028485,0.0937017245597288,0,0,0,0.175951124163949,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146199987425332,0,0,1.26173969138476,0.411618449517138,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.56880943980467,1.87538698547525,0,0,0,0,0,0,0,0,0,0,0.395287777946524,0.642642632843614,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.11255181206306,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120195449519969,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.564751842617067,1.84130094602871,1.71868654031819,0.68741272937475,1.37016503954128,0.755393897389701,0.675022500231806,0.900642406448441,3.17199686288943,1.55328093525546,0,0,0.170733605754134,0,0,0,0,0.206035057238894,0,0,0,0,0.0936415074698824,0.0640251524048693,0,0,0,0,0,0,0,0,0,0,0,0,0,0.263069711437843,0.135804113845862,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p7@Pde1b | |||
}} |
Revision as of 10:11, 13 September 2013
Short description: | p7@Pde1b |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_7_at_Pde1b_5end |
Coexpression cluster: | MCL_coexpression_mm9:90 |
Association with transcript: | -38bp_to_ENSMUST00000023132, NM_008800, uc007xyh.1_5end |
EntrezGene: | Pde1b |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
raphe nuclei neuron | 1.08e-12 | 3 |
neuron of the substantia nigra | 3.52e-12 | 3 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.