FFCP PHASE1:Hg19::chr10:76871353..76871394,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=142891 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=26320 | |||
|TSSclassifier=strong | |||
|UniProt=Q96LT4 | |||
|association_with_transcript=0bp_to_ENST00000542569,NM_001174156,NM_144660,uc001jwx.1_5end | |||
|description=CAGE_peak_2_at_SAMD8_5end | |||
|id=chr10:76871353..76871394,+ | |||
|ontology_enrichment_celltype=CL:0002057!1.08e-15!42;CL:0000766!2.30e-13!76;CL:0000860!4.77e-13!45;CL:0000557!2.36e-11!71;CL:0002009!4.54e-11!65;CL:0000738!2.40e-10!140;CL:0002194!2.55e-10!63;CL:0000576!2.55e-10!63;CL:0000040!2.55e-10!63;CL:0000559!2.55e-10!63;CL:0000839!5.39e-09!70 | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.30e-12;33!CL:0002057;1.30e-12;33!CL:0000576;7.47e-09;48!CL:0000473;1.28e-08;39!CL:0000234;1.28e-08;39!CL:0000766;4.93e-07;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,1.08e-15,42;CL:0002057,1.08e-15,42;CL:0000766,8.53e-15,72;CL:0000473,5.29e-13,48;CL:0000234,5.29e-13,48;CL:0000557,1.12e-12,67;CL:0002009,1.85e-12,61;CL:0002194,1.15e-11,59;CL:0000576,1.15e-11,59;CL:0000040,1.15e-11,59;CL:0000559,1.15e-11,59;CL:0000738,4.16e-11,136;CL:0000839,4.23e-10,66;CL:0002087,3.55e-07,115 | |||
|ontology_enrichment_development_v019=CL:0002057;1.13e-11;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!4.19e-27!115;UBERON:0001049!3.07e-24!57;UBERON:0005068!3.07e-24!57;UBERON:0006241!3.07e-24!57;UBERON:0007135!3.07e-24!57;UBERON:0003080!1.67e-21!42;UBERON:0002616!2.64e-21!59;UBERON:0002780!5.06e-21!41;UBERON:0001890!5.06e-21!41;UBERON:0006240!5.06e-21!41;UBERON:0001017!2.10e-18!82;UBERON:0000955!1.37e-17!69;UBERON:0006238!1.37e-17!69;UBERON:0001893!2.35e-17!34;UBERON:0002020!2.41e-17!34;UBERON:0003528!2.41e-17!34;UBERON:0002791!9.96e-17!33;UBERON:0005743!1.30e-16!86;UBERON:0001869!2.67e-16!32;UBERON:0000073!5.63e-16!94;UBERON:0001016!5.63e-16!94;UBERON:0003075!2.75e-15!86;UBERON:0007284!2.75e-15!86;UBERON:0002346!1.22e-14!90;UBERON:0002619!2.64e-12!22;UBERON:0000956!5.33e-12!25;UBERON:0000203!5.33e-12!25;UBERON:0000033!2.19e-11!123;UBERON:0001950!4.09e-11!20;UBERON:0000153!4.48e-11!129;UBERON:0007811!4.48e-11!129;UBERON:0002390!4.89e-11!102;UBERON:0003061!4.89e-11!102;UBERON:0004765!1.31e-10!101;UBERON:0001434!1.31e-10!101;UBERON:0003056!1.83e-10!61;UBERON:0002371!6.71e-10!80;UBERON:0002193!7.23e-10!112;UBERON:0001474!5.21e-09!86;UBERON:0004121!6.95e-08!169;UBERON:0000924!1.03e-07!173;UBERON:0006601!1.03e-07!173;UBERON:0002204!2.50e-07!167;UBERON:0002308!5.88e-07!9;UBERON:0000125!5.88e-07!9;UBERON:0002420!6.28e-07!9;UBERON:0007245!6.28e-07!9;UBERON:0010009!6.28e-07!9;UBERON:0010011!6.28e-07!9;UBERON:0000454!6.28e-07!9 | |||
|ontology_enrichment_uberon_v019=UBERON:0002780;3.80e-15;41!UBERON:0001890;3.80e-15;41!UBERON:0001893;5.98e-15;34!UBERON:0003528;7.93e-15;34!UBERON:0002020;7.93e-15;34!UBERON:0001869;1.48e-14;32!UBERON:0002791;1.73e-14;32!UBERON:0000073;1.55e-13;53!UBERON:0002616;1.55e-13;53!UBERON:0002619;2.09e-12;22!UBERON:0000956;6.09e-12;25!UBERON:0000203;6.09e-12;25!UBERON:0001950;3.34e-11;20!UBERON:0001017;2.52e-09;75!UBERON:0000955;9.81e-09;68!UBERON:0007023;4.50e-08;114!UBERON:0001016;6.45e-08;83!UBERON:0000125;5.49e-07;9!UBERON:0002308;5.49e-07;9!UBERON:0002420;5.96e-07;9!UBERON:0007245;5.96e-07;9!UBERON:0010009;5.96e-07;9!UBERON:0010011;5.96e-07;9!UBERON:0000454;5.96e-07;9 | |||
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| |||
|short_description=p2@SAMD8 | |||
}} |
Revision as of 03:35, 11 January 2014
Short description: | p2@SAMD8 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_SAMD8_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000542569, NM_001174156, NM_144660, uc001jwx.1_5end |
EntrezGene: | SAMD8 |
HGNC: | 26320 |
UniProt: | Q96LT4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 1.08e-15 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.08e-15 | 42 |
myeloid leukocyte | 8.53e-15 | 72 |
defensive cell | 5.29e-13 | 48 |
phagocyte | 5.29e-13 | 48 |
granulocyte monocyte progenitor cell | 1.12e-12 | 67 |
macrophage dendritic cell progenitor | 1.85e-12 | 61 |
monopoietic cell | 1.15e-11 | 59 |
monocyte | 1.15e-11 | 59 |
monoblast | 1.15e-11 | 59 |
promonocyte | 1.15e-11 | 59 |
leukocyte | 4.16e-11 | 136 |
myeloid lineage restricted progenitor cell | 4.23e-10 | 66 |
nongranular leukocyte | 3.55e-07 | 115 |