FFCP PHASE1:Hg19::chr12:6809958..6809996,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=196500 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=25338 | |||
|TSSclassifier=strong | |||
|UniProt=Q8IYJ0,E9PCC5,F5H3A9 | |||
|association_with_transcript=0bp_to_ENST00000320591,ENST00000439553,ENST00000534837,ENST00000541423_5end | |||
|coexpression_cluster_id=C3 | |||
|description=CAGE_peak_1_at_C12orf53_5end | |||
|id=chr12:6809958..6809996,- | |||
|ontology_enrichment_celltype=CL:0000055!3.89e-14!180;CL:0000393!9.53e-11!60;CL:0000211!9.53e-11!60;CL:0000183!8.60e-10!59;CL:0002319!1.08e-09!25;CL:0000187!5.49e-09!54;CL:0000192!1.16e-08!42;CL:0000514!1.16e-08!42;CL:0000680!1.13e-07!57;CL:0000056!1.13e-07!57;CL:0000355!1.13e-07!57;CL:0000359!2.57e-07!32 | |||
|ontology_enrichment_celltype_v019=CL:0002319;8.87e-10;25 | |||
|ontology_enrichment_celltype_v019_2=CL:0002319,3.95e-10,25;CL:0000393,8.60e-10,61;CL:0000211,8.60e-10,61;CL:0000192,5.64e-09,43;CL:0000514,5.64e-09,43;CL:0000187,4.56e-08,55;CL:0000680,3.64e-07,58;CL:0000056,3.64e-07,58;CL:0000355,3.64e-07,58;CL:0000359,4.57e-07,32;CL:0000095,8.66e-07,17;CL:0000123,8.66e-07,17 | |||
|ontology_enrichment_development_v019=UBERON:0006601;9.08e-14;82!UBERON:0006238;5.62e-07;10 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!1.36e-44!94;UBERON:0001016!1.36e-44!94;UBERON:0005743!3.19e-44!86;UBERON:0001017!7.36e-43!82;UBERON:0001049!4.42e-37!57;UBERON:0005068!4.42e-37!57;UBERON:0006241!4.42e-37!57;UBERON:0007135!4.42e-37!57;UBERON:0000955!2.54e-36!69;UBERON:0006238!2.54e-36!69;UBERON:0002346!1.00e-35!90;UBERON:0003075!1.61e-35!86;UBERON:0007284!1.61e-35!86;UBERON:0002616!2.69e-31!59;UBERON:0002780!7.00e-29!41;UBERON:0001890!7.00e-29!41;UBERON:0006240!7.00e-29!41;UBERON:0003080!1.44e-27!42;UBERON:0000924!5.95e-26!173;UBERON:0006601!5.95e-26!173;UBERON:0004121!2.22e-25!169;UBERON:0003056!2.42e-25!61;UBERON:0002020!8.77e-25!34;UBERON:0003528!8.77e-25!34;UBERON:0001893!9.10e-25!34;UBERON:0002791!4.86e-24!33;UBERON:0000033!1.05e-23!123;UBERON:0001869!1.24e-23!32;UBERON:0007023!4.45e-23!115;UBERON:0000153!2.32e-22!129;UBERON:0007811!2.32e-22!129;UBERON:0000956!1.28e-18!25;UBERON:0000203!1.28e-18!25;UBERON:0000025!1.29e-18!194;UBERON:0000475!2.17e-18!365;UBERON:0002619!3.73e-17!22;UBERON:0000481!5.45e-17!347;UBERON:0001950!9.57e-16!20;UBERON:0000119!1.34e-15!312;UBERON:0000483!3.20e-15!309;UBERON:0004111!1.41e-13!241;UBERON:0000477!2.12e-12!286;UBERON:0000922!8.16e-11!612;UBERON:0003076!1.78e-10!15;UBERON:0003057!1.78e-10!15;UBERON:0000468!9.44e-10!659;UBERON:0002050!4.85e-09!605;UBERON:0005423!4.85e-09!605;UBERON:0000923!8.65e-09!604;UBERON:0005291!8.65e-09!604;UBERON:0006598!8.65e-09!604;UBERON:0002532!8.65e-09!604;UBERON:0004732!9.26e-09!13;UBERON:0004733!1.20e-08!12;UBERON:0002028!1.20e-08!12;UBERON:0007277!1.20e-08!12;UBERON:0000467!1.56e-08!625;UBERON:0000480!2.26e-08!626;UBERON:0002420!9.14e-08!9;UBERON:0007245!9.14e-08!9;UBERON:0010009!9.14e-08!9;UBERON:0010011!9.14e-08!9;UBERON:0000454!9.14e-08!9;UBERON:0002308!1.34e-07!9;UBERON:0000125!1.34e-07!9;UBERON:0000064!1.62e-07!219;UBERON:0002385!1.93e-07!63;UBERON:0001015!1.93e-07!63;UBERON:0000383!1.93e-07!63;UBERON:0001134!4.04e-07!61;UBERON:0002036!4.04e-07!61;UBERON:0003082!4.04e-07!61;UBERON:0002680!7.64e-07!9;UBERON:0001895!7.64e-07!9;UBERON:0010092!7.64e-07!9 | |||
|ontology_enrichment_uberon_v019=UBERON:0001869;9.94e-29;32!UBERON:0001893;1.13e-28;34!UBERON:0003528;1.25e-28;34!UBERON:0002020;1.25e-28;34!UBERON:0002791;1.45e-28;32!UBERON:0002780;7.74e-28;41!UBERON:0001890;7.74e-28;41!UBERON:0000073;8.76e-28;53!UBERON:0002616;8.76e-28;53!UBERON:0000956;7.69e-25;25!UBERON:0000203;7.69e-25;25!UBERON:0002619;6.02e-23;22!UBERON:0000955;1.10e-21;68!UBERON:0001017;3.00e-21;75!UBERON:0001950;5.13e-21;20!UBERON:0001016;1.80e-19;83!UBERON:0004732;1.84e-11;13!UBERON:0004733;2.65e-11;12!UBERON:0002028;2.65e-11;12!UBERON:0002420;4.72e-10;9!UBERON:0007245;4.72e-10;9!UBERON:0010009;4.72e-10;9!UBERON:0010011;4.72e-10;9!UBERON:0000454;4.72e-10;9!UBERON:0000125;8.06e-10;9!UBERON:0002308;8.06e-10;9!UBERON:0002680;7.71e-09;9!UBERON:0001895;7.71e-09;9!UBERON:0011216;1.26e-08;132!UBERON:0009663;4.67e-08;7!UBERON:0007023;6.91e-08;114!UBERON:0010314;7.43e-08;132!UBERON:0001871;1.36e-07;6!UBERON:0000200;1.69e-07;6!UBERON:0001894;6.02e-07;7 | |||
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| |||
|short_description=p1@C12orf53 | |||
}} |
Revision as of 11:44, 11 January 2014
Short description: | p1@C12orf53 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_C12orf53_5end |
Coexpression cluster: | C3_occipital_temporal_insula_medial_postcentral_frontal_amygdala |
Association with transcript: | 0bp_to_ENST00000320591, ENST00000439553, ENST00000534837, ENST00000541423_5end |
EntrezGene: | C12orf53 |
HGNC: | 25338 |
UniProt: | Q8IYJ0E9PCC5F5H3A9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neural cell | 3.95e-10 | 25 |
electrically responsive cell | 8.60e-10 | 61 |
electrically active cell | 8.60e-10 | 61 |
smooth muscle cell | 5.64e-09 | 43 |
smooth muscle myoblast | 5.64e-09 | 43 |
muscle cell | 4.56e-08 | 55 |
muscle precursor cell | 3.64e-07 | 58 |
myoblast | 3.64e-07 | 58 |
multi-potent skeletal muscle stem cell | 3.64e-07 | 58 |
vascular associated smooth muscle cell | 4.57e-07 | 32 |
neuron associated cell | 8.66e-07 | 17 |
neuron associated cell (sensu Vertebrata) | 8.66e-07 | 17 |