FFCP PHASE1:Hg19::chr10:128995029..128995053,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(8 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr10:128995029..128995053,- | |||
|coexpression_cluster_id=C10 | |||
|description=CAGE_peak_at_chr10:128995029..128995053,- | |description=CAGE_peak_at_chr10:128995029..128995053,- | ||
|id=chr10:128995029..128995053,- | |id=chr10:128995029..128995053,- | ||
|ontology_enrichment_celltype=CL:0000047!3.75e-07!8;CL:0002319!5.29e-07!25 | |ontology_enrichment_celltype=CL:0000047!3.75e-07!8;CL:0002319!5.29e-07!25 | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000047,1.61e-08,8 | |||
|ontology_enrichment_development_v019=UBERON:0010122;5.76e-16;2!UBERON:0006222;1.06e-08;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!5.81e-59!94;UBERON:0001016!5.81e-59!94;UBERON:0001017!1.59e-58!82;UBERON:0005743!5.15e-57!86;UBERON:0001049!5.41e-52!57;UBERON:0005068!5.41e-52!57;UBERON:0006241!5.41e-52!57;UBERON:0007135!5.41e-52!57;UBERON:0000955!4.76e-46!69;UBERON:0006238!4.76e-46!69;UBERON:0002780!1.02e-42!41;UBERON:0001890!1.02e-42!41;UBERON:0006240!1.02e-42!41;UBERON:0002616!1.29e-42!59;UBERON:0003080!1.99e-41!42;UBERON:0003075!1.07e-40!86;UBERON:0007284!1.07e-40!86;UBERON:0002346!4.03e-38!90;UBERON:0007023!1.16e-34!115;UBERON:0003056!1.00e-33!61;UBERON:0002020!6.21e-33!34;UBERON:0003528!6.21e-33!34;UBERON:0001893!1.19e-32!34;UBERON:0004121!1.94e-31!169;UBERON:0002791!2.56e-31!33;UBERON:0000924!3.25e-30!173;UBERON:0006601!3.25e-30!173;UBERON:0001869!3.64e-30!32;UBERON:0000153!4.31e-28!129;UBERON:0007811!4.31e-28!129;UBERON:0000033!4.49e-28!123;UBERON:0002619!7.35e-21!22;UBERON:0000956!8.18e-20!25;UBERON:0000203!8.18e-20!25;UBERON:0001950!4.79e-18!20;UBERON:0002308!1.38e-15!9;UBERON:0000125!1.38e-15!9;UBERON:0009663!1.27e-12!7;UBERON:0000475!1.60e-12!365;UBERON:0002420!2.07e-12!9;UBERON:0007245!2.07e-12!9;UBERON:0010009!2.07e-12!9;UBERON:0010011!2.07e-12!9;UBERON:0000454!2.07e-12!9;UBERON:0001894!9.93e-12!7;UBERON:0006222!9.93e-12!7;UBERON:0003076!1.68e-11!15;UBERON:0003057!1.68e-11!15;UBERON:0000025!4.81e-11!194;UBERON:0002298!4.55e-10!8;UBERON:0000483!2.70e-09!309;UBERON:0000119!4.96e-09!312;UBERON:0000369!2.61e-08!4;UBERON:0002435!2.61e-08!4;UBERON:0000204!2.61e-08!4;UBERON:0010082!2.61e-08!4;UBERON:0002050!5.21e-08!605;UBERON:0005423!5.21e-08!605;UBERON:0000922!5.33e-08!612;UBERON:0004733!6.41e-08!12;UBERON:0002028!6.41e-08!12;UBERON:0007277!6.41e-08!12;UBERON:0001871!1.21e-07!7;UBERON:0000923!1.36e-07!604;UBERON:0005291!1.36e-07!604;UBERON:0006598!1.36e-07!604;UBERON:0002532!1.36e-07!604;UBERON:0004111!1.50e-07!241;UBERON:0000064!1.98e-07!219;UBERON:0000467!3.10e-07!625;UBERON:0000477!3.53e-07!286;UBERON:0000480!3.54e-07!626;UBERON:0004732!3.55e-07!13;UBERON:0000468!4.63e-07!659;UBERON:0000200!4.90e-07!6;UBERON:0003296!5.78e-07!4;UBERON:0010133!5.78e-07!4 | |||
|ontology_enrichment_uberon_v019=UBERON:0002420;1.42e-38;9!UBERON:0000125;1.42e-38;9!UBERON:0007245;1.42e-38;9!UBERON:0002308;1.42e-38;9!UBERON:0010009;1.42e-38;9!UBERON:0010011;1.42e-38;9!UBERON:0000454;1.42e-38;9!UBERON:0009663;5.73e-37;7!UBERON:0002780;2.25e-34;41!UBERON:0001890;2.25e-34;41!UBERON:0002791;3.84e-33;32!UBERON:0001869;5.08e-32;32!UBERON:0000369;5.00e-30;4!UBERON:0002435;5.00e-30;4!UBERON:0000204;5.00e-30;4!UBERON:0003528;7.40e-30;34!UBERON:0002020;7.40e-30;34!UBERON:0000073;4.51e-28;53!UBERON:0002616;4.51e-28;53!UBERON:0001893;7.39e-26;34!UBERON:0005383;4.34e-23;3!UBERON:0005382;4.34e-23;3!UBERON:0000955;1.17e-20;68!UBERON:0001017;1.91e-18;75!UBERON:0001016;1.03e-16;83!UBERON:0001873;5.76e-16;2!UBERON:0001875;5.70e-15;2!UBERON:0006514;5.70e-15;2!UBERON:0002619;1.65e-14;22!UBERON:0000349;2.17e-13;5!UBERON:0000956;9.65e-13;25!UBERON:0000203;9.65e-13;25!UBERON:0001950;6.71e-12;20!UBERON:0002298;3.00e-11;6!UBERON:0000988;2.74e-10;3!UBERON:0001894;7.27e-10;7!UBERON:0001874;7.00e-09;1!UBERON:0001882;1.06e-08;1!UBERON:0005403;1.06e-08;1!UBERON:0002022;2.46e-08;1!UBERON:0002784;4.15e-08;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,1.08e-45,81;UBERON:0000073,1.42e-44,53;UBERON:0002616,1.42e-44,53;UBERON:0001049,4.83e-42,56;UBERON:0005068,4.83e-42,56;UBERON:0006241,4.83e-42,56;UBERON:0007135,4.83e-42,56;UBERON:0000955,1.60e-41,68;UBERON:0006238,1.60e-41,68;UBERON:0002780,6.87e-41,41;UBERON:0001890,6.87e-41,41;UBERON:0003080,6.87e-41,41;UBERON:0006240,6.87e-41,41;UBERON:0001016,8.01e-41,89;UBERON:0002420,8.61e-39,9;UBERON:0007245,8.61e-39,9;UBERON:0010009,8.61e-39,9;UBERON:0010011,8.61e-39,9;UBERON:0000454,8.61e-39,9;UBERON:0000125,9.63e-39,9;UBERON:0002308,9.63e-39,9;UBERON:0003528,9.93e-38,34;UBERON:0002020,9.93e-38,34;UBERON:0009663,4.77e-37,7;UBERON:0002791,1.44e-34,32;UBERON:0001869,1.44e-34,32;UBERON:0001893,1.86e-32,34;UBERON:0000369,6.26e-30,4;UBERON:0002435,6.26e-30,4;UBERON:0000204,6.26e-30,4;UBERON:0010082,6.26e-30,4;UBERON:0003075,9.32e-28,82;UBERON:0007284,9.32e-28,82;UBERON:0003056,1.01e-26,61;UBERON:0002346,2.57e-26,86;UBERON:0005383,4.19e-23,3;UBERON:0005382,4.19e-23,3;UBERON:0010371,3.47e-21,104;UBERON:0004121,1.32e-19,171;UBERON:0000924,1.32e-19,171;UBERON:0006601,1.32e-19,171;UBERON:0011216,1.08e-18,223;UBERON:0001873,5.56e-16,2;UBERON:0010122,5.56e-16,2;UBERON:0010314,5.83e-16,132;UBERON:0001875,3.72e-15,2;UBERON:0006514,3.72e-15,2;UBERON:0002619,1.49e-14,22;UBERON:0000349,1.79e-13,5;UBERON:0007023,5.10e-13,114;UBERON:0000956,8.81e-13,25;UBERON:0000203,8.81e-13,25;UBERON:0000025,1.63e-12,192;UBERON:0001950,6.33e-12,20;UBERON:0002298,2.15e-11,6;UBERON:0000988,1.62e-10,3;UBERON:0001894,7.50e-10,7;UBERON:0006222,7.50e-10,7;UBERON:0004111,3.16e-09,240;UBERON:0001874,7.01e-09,1;UBERON:0001882,1.37e-08,1;UBERON:0005403,1.37e-08,1;UBERON:0002022,3.53e-08,1;UBERON:0002784,4.88e-08,4 | |||
|phase1_expression=0,0.642301571672949,0,0,0.446961094427288,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.273748850145768,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.236482229888585,0,0,0,0,0,0,0,0,0,0,0.199463657621632,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205601498999509,0,0,0,0,0,0,0,0,0,0,0,0.276350017785848,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0,0,0,0,0,0.283604451492204,0.221729397462564,0,0.130979075497713,0,0,0,0,0,0,0,0.371457501329565,0.198762407366705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117434498643765,0.161872944368132,0.280901613404497,0,0,0,0,0,0,0,0,0.125118519871964,0,0,0,0,0,0,0,0,0.300091096084402,0,0,0,0.168776332241266,0.0974370051611986,0,0,0,0,0,0,0,0,0,0,0,0,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.26755034821831,0,0,0,0,0,0,0,0,0,0,0,0,0.231860809950154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254094624222463,1.30139853857622,2.31986643833309,0.837581326671744,1.27587750330633,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128139149255701,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193341436584244,0,0,0.275673144969061,0,0,0,0.0890320356467374,0,0,0,0.10115778085555,0,0.31481234683064,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.274537029736055,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.238231775457789,0,0,0,0,0.106824071127473,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.82870241333667,0,0,0.211125408127993,0,0,0,0.102268682502155,0,0,0,0.179021174675609,0,0,0,0,0.969332746095218,0.649376687132959,5.98841394003583,0,0,0,0,0,0,0,0,1.04174996959975,7.97167247232455,2.41192877250816,0,0.221158519862449,0.295547618953547,0.219385397153973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.265372693510018,0,0,0,0,0.404406797884062,0,2.81117334870407,0,0,0,0,0,2.75465485467441,0.189559738885464,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.274083849293502,0,0.823040347426423,0,0.0801588202515337,0,0,0,0,0,0,0.124252535565433,0,0,0,0,0,1.80126086612937,1.50595916781192,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.795229689809303,1.63444087333891,0.160753148465019,0,0,0,0,1.09349201984444,0,0.0788057072991982,0.314727528809989,0,0.179287339332845,0,0,0,0,0,0,0,0,0,0.170388021785422,0,0,0,1.68067843270016,0.66116300871345,0,0,0,0.157204305099666,0,0,0,0,0,0,0,0,0,0,0,0.976210119215705,0.625954653532499,2.29363678276028,0.332787154610557,0.931446044120752,1.10678907948985,0,0,0,0,0,0.28984205722165,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.380805212168795,0.406870733204662,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179088841081487,0,0,0,0,0.337884881306145,0,0,0,0.691292180758654,0,0,0,0.655219697692825,0,0,0,0,0,0,0,0,0,0.127894371303652,0.107824811396682,0,0.109209638192014,0,0,0,0,0,0,0,0,0,2.11956442818316,0,0.638535436228605,1.43581454968528,3.02486035466062,0.829887029570615,0.968853873791107,0,0,0.11796972334774,0,0,0,0,0,0.150420656698515,0,0,0,0,0,0.607838261565552,0,0.620060389503552,0.824405532520789,5.4697480901822,0.548257766857182,0.496211178389294,0,0,1.07140367175657,0.672567444437648,0.606965604236632,0.227662191351298,0.0887023701626388,0,0,1.83518279037446,0.591954962065642,0,0,0.39246546425257,4.39923651764805,0,0,0,0,0.285906176706625,0.94808167039636,0,0,0,0,0,0,0,0.354996002191696,0.170426809518315,0,0,0,0,0,0,0,0,0,0,0,0,0,0.356760272332706,0,1.64910775118144,0,0,0.218559560503957,0,0,0,0.981542335574726,0.297046400327086,0.4226557275834,0,0,0.0644578879735772,0,0,0,0,0.730336388246517,0,0.286679166302903,0,0.679914901909147,2.18175345170189,0,0,0,0,0.126166424835079,0,0,0,0,0,0,0.151557396436479,0.267964130156178,2.48750831837634,0.930896962757057,0,0,0.129177819672012,0.0620747142958579,0,0.0636471582781649,0,0,0,0,0.0717222053926763,0,0,0.106727345877715,0,0,0,0,0.406896178315738,0,0,0 | |phase1_expression=0,0.642301571672949,0,0,0.446961094427288,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.273748850145768,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.236482229888585,0,0,0,0,0,0,0,0,0,0,0.199463657621632,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205601498999509,0,0,0,0,0,0,0,0,0,0,0,0.276350017785848,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0,0,0,0,0,0.283604451492204,0.221729397462564,0,0.130979075497713,0,0,0,0,0,0,0,0.371457501329565,0.198762407366705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117434498643765,0.161872944368132,0.280901613404497,0,0,0,0,0,0,0,0,0.125118519871964,0,0,0,0,0,0,0,0,0.300091096084402,0,0,0,0.168776332241266,0.0974370051611986,0,0,0,0,0,0,0,0,0,0,0,0,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.26755034821831,0,0,0,0,0,0,0,0,0,0,0,0,0.231860809950154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254094624222463,1.30139853857622,2.31986643833309,0.837581326671744,1.27587750330633,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128139149255701,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193341436584244,0,0,0.275673144969061,0,0,0,0.0890320356467374,0,0,0,0.10115778085555,0,0.31481234683064,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.274537029736055,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.238231775457789,0,0,0,0,0.106824071127473,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.82870241333667,0,0,0.211125408127993,0,0,0,0.102268682502155,0,0,0,0.179021174675609,0,0,0,0,0.969332746095218,0.649376687132959,5.98841394003583,0,0,0,0,0,0,0,0,1.04174996959975,7.97167247232455,2.41192877250816,0,0.221158519862449,0.295547618953547,0.219385397153973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.265372693510018,0,0,0,0,0.404406797884062,0,2.81117334870407,0,0,0,0,0,2.75465485467441,0.189559738885464,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.274083849293502,0,0.823040347426423,0,0.0801588202515337,0,0,0,0,0,0,0.124252535565433,0,0,0,0,0,1.80126086612937,1.50595916781192,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.795229689809303,1.63444087333891,0.160753148465019,0,0,0,0,1.09349201984444,0,0.0788057072991982,0.314727528809989,0,0.179287339332845,0,0,0,0,0,0,0,0,0,0.170388021785422,0,0,0,1.68067843270016,0.66116300871345,0,0,0,0.157204305099666,0,0,0,0,0,0,0,0,0,0,0,0.976210119215705,0.625954653532499,2.29363678276028,0.332787154610557,0.931446044120752,1.10678907948985,0,0,0,0,0,0.28984205722165,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.380805212168795,0.406870733204662,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179088841081487,0,0,0,0,0.337884881306145,0,0,0,0.691292180758654,0,0,0,0.655219697692825,0,0,0,0,0,0,0,0,0,0.127894371303652,0.107824811396682,0,0.109209638192014,0,0,0,0,0,0,0,0,0,2.11956442818316,0,0.638535436228605,1.43581454968528,3.02486035466062,0.829887029570615,0.968853873791107,0,0,0.11796972334774,0,0,0,0,0,0.150420656698515,0,0,0,0,0,0.607838261565552,0,0.620060389503552,0.824405532520789,5.4697480901822,0.548257766857182,0.496211178389294,0,0,1.07140367175657,0.672567444437648,0.606965604236632,0.227662191351298,0.0887023701626388,0,0,1.83518279037446,0.591954962065642,0,0,0.39246546425257,4.39923651764805,0,0,0,0,0.285906176706625,0.94808167039636,0,0,0,0,0,0,0,0.354996002191696,0.170426809518315,0,0,0,0,0,0,0,0,0,0,0,0,0,0.356760272332706,0,1.64910775118144,0,0,0.218559560503957,0,0,0,0.981542335574726,0.297046400327086,0.4226557275834,0,0,0.0644578879735772,0,0,0,0,0.730336388246517,0,0.286679166302903,0,0.679914901909147,2.18175345170189,0,0,0,0,0.126166424835079,0,0,0,0,0,0,0.151557396436479,0.267964130156178,2.48750831837634,0.930896962757057,0,0,0.129177819672012,0.0620747142958579,0,0.0636471582781649,0,0,0,0,0.0717222053926763,0,0,0.106727345877715,0,0,0,0,0.406896178315738,0,0,0 | ||
|short_description=p@chr10:128995029..128995053,- | |short_description=p@chr10:128995029..128995053,- | ||
}} | }} |
Latest revision as of 11:34, 23 July 2015
Short description: | p@chr10:128995029..128995053, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:128995029..128995053, - |
Coexpression cluster: | C10_occipital_temporal_parietal_brain_duodenum_Neurons_Neural |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuronal stem cell | 1.61e-08 | 8 |