FFCP PHASE1:Hg19::chr17:171147..171161,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr17:171147..171161,+ | |||
|coexpression_cluster_id=C3608 | |coexpression_cluster_id=C3608 | ||
|description=CAGE_peak_at_chr17:171147..171161,+ | |description=CAGE_peak_at_chr17:171147..171161,+ | ||
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|ontology_enrichment_celltype=CL:1000449!8.40e-24!16;CL:1000507!1.11e-21!12;CL:1000494!1.11e-21!12;CL:1000497!7.20e-21!18;CL:0002518!7.20e-21!18;CL:0002681!3.23e-20!13;CL:0002584!3.23e-20!13;CL:0002322!3.69e-15!5;CL:0000239!4.55e-11!3;CL:1000615!4.55e-11!3;CL:0002306!4.55e-11!3;CL:1000612!2.72e-08!7;CL:1000746!2.72e-08!7 | |ontology_enrichment_celltype=CL:1000449!8.40e-24!16;CL:1000507!1.11e-21!12;CL:1000494!1.11e-21!12;CL:1000497!7.20e-21!18;CL:0002518!7.20e-21!18;CL:0002681!3.23e-20!13;CL:0002584!3.23e-20!13;CL:0002322!3.69e-15!5;CL:0000239!4.55e-11!3;CL:1000615!4.55e-11!3;CL:0002306!4.55e-11!3;CL:1000612!2.72e-08!7;CL:1000746!2.72e-08!7 | ||
|ontology_enrichment_celltype_v019=CL:1000507;2.09e-35;10!CL:1000494;2.09e-35;10!CL:1000449;1.24e-33;15!CL:0000650;8.65e-30;2!CL:1000500;8.65e-30;2!CL:1000618;8.65e-30;2!CL:1001318;8.65e-30;2!CL:0002173;8.65e-30;2!CL:1000497;1.15e-29;17!CL:0002518;1.15e-29;17!CL:0002681;1.54e-29;12!CL:0002584;1.54e-29;12!CL:1000746;5.57e-19;7!CL:1000612;5.57e-19;7!CL:0000669;1.99e-15;4!CL:0000342;2.56e-15;1!CL:0002565;2.56e-15;1 | |ontology_enrichment_celltype_v019=CL:1000507;2.09e-35;10!CL:1000494;2.09e-35;10!CL:1000449;1.24e-33;15!CL:0000650;8.65e-30;2!CL:1000500;8.65e-30;2!CL:1000618;8.65e-30;2!CL:1001318;8.65e-30;2!CL:0002173;8.65e-30;2!CL:1000497;1.15e-29;17!CL:0002518;1.15e-29;17!CL:0002681;1.54e-29;12!CL:0002584;1.54e-29;12!CL:1000746;5.57e-19;7!CL:1000612;5.57e-19;7!CL:0000669;1.99e-15;4!CL:0000342;2.56e-15;1!CL:0002565;2.56e-15;1 | ||
|ontology_enrichment_celltype_v019_2=CL:1000507,2.25e-35,10;CL:1000494,2.25e-35,10;CL:1000449,1.14e-33,15;CL:0000650,8.05e-30,2;CL:1000500,8.05e-30,2;CL:1000618,8.05e-30,2;CL:1001318,8.05e-30,2;CL:0002173,8.05e-30,2;CL:1000497,1.06e-29,17;CL:0002518,1.06e-29,17;CL:0002681,1.54e-29,12;CL:0002584,1.54e-29,12;CL:1000746,4.64e-19,7;CL:1000612,4.64e-19,7;CL:0000669,1.92e-15,4;CL:0000342,3.17e-15,1;CL:0002565,3.17e-15,1 | |||
|ontology_enrichment_development_v019=UBERON:0005754;2.56e-15;1!UBERON:0003918;2.21e-13;10!UBERON:0007687;2.21e-13;10!UBERON:0007297;2.57e-08;2!UBERON:0003104;8.13e-08;31 | |ontology_enrichment_development_v019=UBERON:0005754;2.56e-15;1!UBERON:0003918;2.21e-13;10!UBERON:0007687;2.21e-13;10!UBERON:0007297;2.57e-08;2!UBERON:0003104;8.13e-08;31 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:3910;1.50e-08;2 | |ontology_enrichment_disease_v019=DOID:3910;1.50e-08;2 | ||
|ontology_enrichment_disease_v019_2=DOID:3910,1.50e-08,2 | |||
|ontology_enrichment_uberon=UBERON:0000080!2.01e-29!18;UBERON:0002120!2.01e-29!18;UBERON:0004875!2.01e-29!18;UBERON:0005721!2.01e-29!18;UBERON:0005754!2.01e-29!18;UBERON:0007297!2.01e-29!18;UBERON:0006555!1.52e-26!17;UBERON:0005103!1.52e-26!17;UBERON:0000083!1.52e-26!17;UBERON:0009201!1.52e-26!17;UBERON:0004819!1.52e-26!17;UBERON:0006553!1.52e-26!17;UBERON:0003074!1.52e-26!17;UBERON:0003060!1.52e-26!17;UBERON:0000058!2.28e-26!26;UBERON:0004876!3.77e-26!20;UBERON:0002113!3.43e-25!27;UBERON:0003918!3.43e-25!27;UBERON:0005095!3.43e-25!27;UBERON:0007687!3.43e-25!27;UBERON:0003887!9.51e-25!21;UBERON:0004211!8.40e-24!16;UBERON:0001285!8.40e-24!16;UBERON:0007684!8.40e-24!16;UBERON:0003220!8.40e-24!16;UBERON:0004208!8.40e-24!16;UBERON:0009773!1.11e-21!12;UBERON:0001231!1.11e-21!12;UBERON:0004810!1.11e-21!12;UBERON:0000489!1.22e-20!32;UBERON:0001225!3.23e-20!13;UBERON:0008987!3.23e-20!13;UBERON:0001851!4.53e-16!16;UBERON:0006554!5.48e-16!44;UBERON:0001008!1.53e-15!45;UBERON:0000353!5.16e-15!17;UBERON:0003064!9.40e-15!37;UBERON:0005172!9.85e-14!55;UBERON:0005173!9.85e-14!55;UBERON:0002417!5.85e-12!61;UBERON:0000916!5.85e-12!61;UBERON:0006947!3.37e-11!3;UBERON:0004054!3.37e-11!3;UBERON:0006853!4.55e-11!3;UBERON:0007685!4.55e-11!3;UBERON:0004134!4.55e-11!3;UBERON:0003886!8.13e-10!63;UBERON:0005177!1.29e-09!107;UBERON:0009569!8.03e-09!113;UBERON:0003103!9.87e-09!69;UBERON:0005904!1.73e-08!4;UBERON:0002553!1.86e-08!70;UBERON:0000074!2.72e-08!7;UBERON:0001229!2.72e-08!7;UBERON:0001230!2.72e-08!7;UBERON:0005749!2.72e-08!7;UBERON:0004199!2.72e-08!7;UBERON:0004209!2.72e-08!7;UBERON:0004198!2.72e-08!7;UBERON:0001630!8.09e-08!2;UBERON:0005090!8.09e-08!2;UBERON:0000464!8.12e-08!104;UBERON:0000007!1.46e-07!2;UBERON:0000341!2.38e-07!2 | |ontology_enrichment_uberon=UBERON:0000080!2.01e-29!18;UBERON:0002120!2.01e-29!18;UBERON:0004875!2.01e-29!18;UBERON:0005721!2.01e-29!18;UBERON:0005754!2.01e-29!18;UBERON:0007297!2.01e-29!18;UBERON:0006555!1.52e-26!17;UBERON:0005103!1.52e-26!17;UBERON:0000083!1.52e-26!17;UBERON:0009201!1.52e-26!17;UBERON:0004819!1.52e-26!17;UBERON:0006553!1.52e-26!17;UBERON:0003074!1.52e-26!17;UBERON:0003060!1.52e-26!17;UBERON:0000058!2.28e-26!26;UBERON:0004876!3.77e-26!20;UBERON:0002113!3.43e-25!27;UBERON:0003918!3.43e-25!27;UBERON:0005095!3.43e-25!27;UBERON:0007687!3.43e-25!27;UBERON:0003887!9.51e-25!21;UBERON:0004211!8.40e-24!16;UBERON:0001285!8.40e-24!16;UBERON:0007684!8.40e-24!16;UBERON:0003220!8.40e-24!16;UBERON:0004208!8.40e-24!16;UBERON:0009773!1.11e-21!12;UBERON:0001231!1.11e-21!12;UBERON:0004810!1.11e-21!12;UBERON:0000489!1.22e-20!32;UBERON:0001225!3.23e-20!13;UBERON:0008987!3.23e-20!13;UBERON:0001851!4.53e-16!16;UBERON:0006554!5.48e-16!44;UBERON:0001008!1.53e-15!45;UBERON:0000353!5.16e-15!17;UBERON:0003064!9.40e-15!37;UBERON:0005172!9.85e-14!55;UBERON:0005173!9.85e-14!55;UBERON:0002417!5.85e-12!61;UBERON:0000916!5.85e-12!61;UBERON:0006947!3.37e-11!3;UBERON:0004054!3.37e-11!3;UBERON:0006853!4.55e-11!3;UBERON:0007685!4.55e-11!3;UBERON:0004134!4.55e-11!3;UBERON:0003886!8.13e-10!63;UBERON:0005177!1.29e-09!107;UBERON:0009569!8.03e-09!113;UBERON:0003103!9.87e-09!69;UBERON:0005904!1.73e-08!4;UBERON:0002553!1.86e-08!70;UBERON:0000074!2.72e-08!7;UBERON:0001229!2.72e-08!7;UBERON:0001230!2.72e-08!7;UBERON:0005749!2.72e-08!7;UBERON:0004199!2.72e-08!7;UBERON:0004209!2.72e-08!7;UBERON:0004198!2.72e-08!7;UBERON:0001630!8.09e-08!2;UBERON:0005090!8.09e-08!2;UBERON:0000464!8.12e-08!104;UBERON:0000007!1.46e-07!2;UBERON:0000341!2.38e-07!2 | ||
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| ||
|short_description=p@chr17:171147..171161,+ | |short_description=p@chr17:171147..171161,+ | ||
}} | }} |
Latest revision as of 14:16, 25 July 2015
Short description: | p@chr17:171147..171161, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr17:171147..171161, + |
Coexpression cluster: | C3608_Renal_ductus_bronchioalveolar_retina_kidney_seminal_Alveolar |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
kidney tubule cell | 2.25e-35 | 10 |
nephron tubule epithelial cell | 2.25e-35 | 10 |
epithelial cell of nephron | 1.14e-33 | 15 |
mesangial cell | 8.05e-30 | 2 |
kidney interstitial cell | 8.05e-30 | 2 |
juxtaglomerular complex cell | 8.05e-30 | 2 |
renal interstitial pericyte | 8.05e-30 | 2 |
extraglomerular mesangial cell | 8.05e-30 | 2 |
kidney cell | 1.06e-29 | 17 |
kidney epithelial cell | 1.06e-29 | 17 |
kidney cortical cell | 1.54e-29 | 12 |
renal cortical epithelial cell | 1.54e-29 | 12 |
glomerular cell | 4.64e-19 | 7 |
kidney corpuscule cell | 4.64e-19 | 7 |
pericyte cell | 1.92e-15 | 4 |
pigment cell (sensu Vertebrata) | 3.17e-15 | 1 |
iris pigment epithelial cell | 3.17e-15 | 1 |
Ontology term | p-value | n |
---|---|---|
lung adenocarcinoma | 1.50e-08 | 2 |