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FFCP PHASE1:Mm9::chr8:4258176..4258220,-: Difference between revisions

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{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=NA
|EntrezGene=NA
|HGNC=
|HGNC=
|MCL_coexpression_id=2465
|TSSclassifier=NA
|UniProt=NA
|UniProt=NA
|association_with_transcript=NA
|association_with_transcript=NA
|cluster_id=chr8:4258176..4258220,-
|description=CAGE_peak_at_chr8:4258176..4258220,-
|description=CAGE_peak_at_chr8:4258176..4258220,-
|id=chr8:4258176..4258220,-
|id=chr8:4258176..4258220,-
|ontology_enrichment_celltype=CL:0002319!2.22e-16!43;CL:0000221!3.57e-16!44;CL:0000133!3.57e-16!44;CL:0000540!1.21e-13!33;CL:0000047!1.21e-13!33;CL:0000031!1.21e-13!33;CL:0000404!1.21e-13!33;CL:0000055!2.58e-12!50;CL:0000117!3.18e-12!23;CL:0000337!3.18e-12!23;CL:0000393!2.90e-10!39;CL:0000211!2.90e-10!39
|ontology_enrichment_celltype_v019_2=CL:0002319,9.54e-20,43;CL:0000221,5.22e-19,44;CL:0000133,5.22e-19,44;CL:0000540,2.65e-18,33;CL:0000047,2.65e-18,33;CL:0000031,2.65e-18,33;CL:0000404,2.65e-18,33;CL:0000117,9.32e-18,23;CL:0000337,9.32e-18,23;CL:0000393,6.71e-14,39;CL:0000211,6.71e-14,39;CL:0002321,2.23e-08,70;CL:0002609,5.77e-07,6
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0001017!1.92e-29!73;UBERON:0005743!1.92e-29!73;UBERON:0000073!7.37e-29!75;UBERON:0001016!7.37e-29!75;UBERON:0004121!2.70e-23!102;UBERON:0000924!2.70e-23!102;UBERON:0006601!2.70e-23!102;UBERON:0003056!4.51e-22!49;UBERON:0002346!8.25e-22!71;UBERON:0003075!8.25e-22!71;UBERON:0007284!8.25e-22!71;UBERON:0002780!1.79e-21!39;UBERON:0001890!1.79e-21!39;UBERON:0006240!1.79e-21!39;UBERON:0001049!1.91e-21!52;UBERON:0005068!1.91e-21!52;UBERON:0006241!1.91e-21!52;UBERON:0007135!1.91e-21!52;UBERON:0003080!1.99e-21!40;UBERON:0000955!2.60e-21!50;UBERON:0006238!2.60e-21!50;UBERON:0002020!6.78e-21!34;UBERON:0002616!1.07e-20!49;UBERON:0000033!7.66e-20!63;UBERON:0002791!1.07e-18!29;UBERON:0003528!1.07e-18!29;UBERON:0001893!1.07e-18!29;UBERON:0000956!6.04e-15!21;UBERON:0001869!6.04e-15!21;UBERON:0000203!6.04e-15!21;UBERON:0002619!2.03e-12!17;UBERON:0000153!1.34e-10!94;UBERON:0007811!6.30e-10!86;UBERON:0002021!2.12e-08!10;UBERON:0000411!2.12e-08!10;UBERON:0001950!2.12e-08!10
|ontology_enrichment_uberon_v019_2=UBERON:0001017,3.03e-36,73;UBERON:0001016,1.07e-34,75;UBERON:0002020,5.75e-31,34;UBERON:0000073,6.16e-30,54;UBERON:0002780,1.71e-29,39;UBERON:0001890,1.71e-29,39;UBERON:0006240,1.71e-29,39;UBERON:0003080,2.18e-28,40;UBERON:0003528,1.30e-27,29;UBERON:0002791,1.30e-27,29;UBERON:0001893,1.30e-27,29;UBERON:0004121,1.58e-27,95;UBERON:0000924,1.58e-27,95;UBERON:0006601,1.58e-27,95;UBERON:0001049,4.95e-27,52;UBERON:0005068,4.95e-27,52;UBERON:0006241,4.95e-27,52;UBERON:0007135,4.95e-27,52;UBERON:0003056,2.83e-26,49;UBERON:0002346,2.89e-26,64;UBERON:0003075,2.89e-26,64;UBERON:0007284,2.89e-26,64;UBERON:0000955,3.14e-25,47;UBERON:0006238,3.14e-25,47;UBERON:0002616,2.43e-24,46;UBERON:0000956,6.72e-22,21;UBERON:0001869,6.72e-22,21;UBERON:0000203,6.72e-22,21;UBERON:0010371,7.63e-21,73;UBERON:0002619,4.71e-18,17;UBERON:0010314,9.65e-14,92;UBERON:0002021,5.98e-12,10;UBERON:0000411,5.98e-12,10;UBERON:0001950,5.98e-12,10;UBERON:0001954,1.52e-07,7;UBERON:0003022,1.52e-07,7;UBERON:0002421,1.52e-07,7;UBERON:0000349,1.52e-07,7;UBERON:0002600,1.52e-07,7;UBERON:0000025,5.31e-07,114;UBERON:0002420,6.73e-07,8;UBERON:0007245,6.73e-07,8;UBERON:0010009,6.73e-07,8;UBERON:0010011,6.73e-07,8;UBERON:0000454,6.73e-07,8
|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0.0797721589953364,0,0.174840804837995,0,0,0,0,0,0,1.9559956734746,0.198581902401771,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125896817975577,0,0.734187008646726,0.782391344348039,2.18025156380447,2.85592037554813,3.88859798148567,0.979904951377538,1.43752564364972,0,0,0,0,0.286533439938757,0,2.83243045203437,3.70293685490423,2.53532561402472,1.69422266034566,0,0,0,0,5.69240209984969,13.831858991576,4.25127410464758,11.4755047581937,5.04779907243317,1.14260393761521,1.76694832761291,4.04219637409348,4.69642807989358,9.19218786610021,3.30347642998166,2.55374676170375,1.22885226604995,2.76961204233407,5.58074625974699,6.25096044668112,1.3959149950069,1.12552522006336,3.20876320331301,4.71405736757868,2.84743361598206,2.98239113320481,0.37863096666592,0.302286240427142,0,0,0,0,0.649776417447669,0,0.280888840263504,1.1930122580464,1.29893002301434,1.06001872353102,0.422530259330042,0,0,0,0.432982082022428,0.760079596425296,2.02209778005913,0,0,0.148442139064825,0.520455980298408,0.913396434936424,0.461230994512117,0.452167921657868,1.17588707135705,0,0.494389935468748,0,0,0,0,0,0,0,0,0,0.359445373517761,0,0.254140454146129,0.748953197024114,7.77751024791665,2.63874139437015,6.77914848749878,7.67146371990992,2.0778804455956,3.40706652442291,1.42575109390443,0.124406970610093,0.252722758433675,0,2.08192708740326,0.689706313300419,1.98068342785884,0.90422890701429,1.49680298132921,2.17793324484245,0.655912071918102,0.776110112217047,3.44908788692548,1.51284864134255,0.527853372491847,1.31517439456545,0.556094498451196,1.0447564995665,0.205782136407943,1.59227413454795,0,0,0,0.414251545071004,0,0.36012412292203,0.473489471170421,0.393528463494808,0.771335564436891,0.465067889500816,0,0.350296027101508,0.16455984991348,0.164167464079095,0,0,0,0.134206418760372,5.04695876553905,5.45394445610208,0,0,1.49301775374664,1.39342003116263,0.902072229254653,0.605050573870028,0.667134131534611,0.380451252225118,0,0.823494773620054,0,0.397912944082302,0.19496408711912,0,0.648414149624083,0,3.79335801906163,0.799739588268102,1.1270773567308,1.01825663922657,0.581857461502877,0.771494018793504,0.442655759869801,0.295220295959204,0,0.123397163921801,0,0.166845105716094,0.196558995113203,0,0,0,0,0,0.162135226775035,0,0,0,0,0,0,0,0,0.568474235311454,1.30371981153621,1.18821560042632,1.87752198630802,0.502518772325447,0.476087281772027,0.195133647857799,0.788175720530955,0.221464689648775,0.478364305972461,0.327726629431476,0.345369963731791,0,0,0,0,0,0.642202359951168,0.468846746368813,0.163934945376675,0,1.26203287766503,0.390438744296638,1.72338718186239,1.43381278771531,0.891194696329576,1.13230612315533,3.23848561339915,1.75353514746787,1.58115111178609,3.85585579706168,0.709700426041343,1.24645922567079,0.81443479676788,2.47455184458803,0,0.242780636154981,0.302323556964751,0.565815239267694,0,0.307435147943927,0.258428293168221,0,0,0.632073515871632,0,0,1.02131881726136,0.720244376125241,2.8458910432206,3.00071849044229,1.24138163549592,0.891844088010353,1.15184314421485,1.522324745573,0.469343416127421,0,0.220528398054962,0.32977250588296,0.161464426695906,0.0603129249281559,0,0,0.291480836629851,0.370850604021019,0,0.206386867963223,0,0,0,0,0,0.139951452323658,0,0.954670618015114,1.42351197111511,0,0.648032044930808,0.627264888043406,0.655087691238533,1.34864346384821,0.41326727862668,0.523511883968059,0.259229946583586,0,2.25477175473676,1.49516546043979,0,0.583353565032143,0.387479470433193,0.844780627453891,0.821500670520278,0.13020438484395,0.209718688851422,0.241584120826006,0,0.632022241256357,0,0.410843828659309,0.25984164595559,0.358053391334963,0.198681354781265,0,0.147689527174577,0.100966449948148,0,0.100826185136841,0.194915761479505,0.0962118416403295,0,0,0.221985953374065,0.358855426437903,0.335769232728157,1.35232715822533,1.50145980360946,1.64836461840539,0.428736758158132,0,23.7195773899168,14.2700823317225,13.1765968091061,13.2326950404639,6.85082519770642,17.3740596399631,8.10027000278167,14.4102785031751,14.0474146785103,13.9795284172991,1.764384908931,1.59609949360412,1.70733605754134,1.45864030240976,0.628839487883947,1.2869045591501,0.666740183404846,1.85431551515005,1.28367683836726,0.505394423527595,0.25347929989024,0.565879024158229,0.655490552289177,0.384150914429216,0.459483751644906,0,0.927074607558844,0.77163688185482,0.412085900803307,0.294397840268795,1.02860775715625,0.887379030796687,1.1921809497366,1.45346416632329,0.470546902076653,0.25384382367503,0,0.263069711437843,0.814824683075171,1.12228454331548,0.355905054372522,0.591026894253381,1.63692417267876,0.77468420592983,1.15743966588685,2.99772693525535,0.233931608445408,0.429742108096597,0.191288332068843,0.220591419119515,0.231867835620421
|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0.0797721589953364,0,0.174840804837995,0,0,0,0,0,0,1.9559956734746,0.198581902401771,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125896817975577,0,0.734187008646726,0.782391344348039,2.18025156380447,2.85592037554813,3.88859798148567,0.979904951377538,1.43752564364972,0,0,0,0,0.286533439938757,0,2.83243045203437,3.70293685490423,2.53532561402472,1.69422266034566,0,0,0,0,5.69240209984969,13.831858991576,4.25127410464758,11.4755047581937,5.04779907243317,1.14260393761521,1.76694832761291,4.04219637409348,4.69642807989358,9.19218786610021,3.30347642998166,2.55374676170375,1.22885226604995,2.76961204233407,5.58074625974699,6.25096044668112,1.3959149950069,1.12552522006336,3.20876320331301,4.71405736757868,2.84743361598206,2.98239113320481,0.37863096666592,0.302286240427142,0,0,0,0,0.649776417447669,0,0.280888840263504,1.1930122580464,1.29893002301434,1.06001872353102,0.422530259330042,0,0,0,0.432982082022428,0.760079596425296,2.02209778005913,0,0,0.148442139064825,0.520455980298408,0.913396434936424,0.461230994512117,0.452167921657868,1.17588707135705,0,0.494389935468748,0,0,0,0,0,0,0,0,0,0.359445373517761,0,0.254140454146129,0.748953197024114,7.77751024791665,2.63874139437015,6.77914848749878,7.67146371990992,2.0778804455956,3.40706652442291,1.42575109390443,0.124406970610093,0.252722758433675,0,2.08192708740326,0.689706313300419,1.98068342785884,0.90422890701429,1.49680298132921,2.17793324484245,0.655912071918102,0.776110112217047,3.44908788692548,1.51284864134255,0.527853372491847,1.31517439456545,0.556094498451196,1.0447564995665,0.205782136407943,1.59227413454795,0,0,0,0.414251545071004,0,0.36012412292203,0.473489471170421,0.393528463494808,0.771335564436891,0.465067889500816,0,0.350296027101508,0.16455984991348,0.164167464079095,0,0,0,0.134206418760372,5.04695876553905,5.45394445610208,0,0,1.49301775374664,1.39342003116263,0.902072229254653,0.605050573870028,0.667134131534611,0.380451252225118,0,0.823494773620054,0,0.397912944082302,0.19496408711912,0,0.648414149624083,0,3.79335801906163,0.799739588268102,1.1270773567308,1.01825663922657,0.581857461502877,0.771494018793504,0.442655759869801,0.295220295959204,0,0.123397163921801,0,0.166845105716094,0.196558995113203,0,0,0,0,0,0.162135226775035,0,0,0,0,0,0,0,0,0.568474235311454,1.30371981153621,1.18821560042632,1.87752198630802,0.502518772325447,0.476087281772027,0.195133647857799,0.788175720530955,0.221464689648775,0.478364305972461,0.327726629431476,0.345369963731791,0,0,0,0,0,0.642202359951168,0.468846746368813,0.163934945376675,0,1.26203287766503,0.390438744296638,1.72338718186239,1.43381278771531,0.891194696329576,1.13230612315533,3.23848561339915,1.75353514746787,1.58115111178609,3.85585579706168,0.709700426041343,1.24645922567079,0.81443479676788,2.47455184458803,0,0.242780636154981,0.302323556964751,0.565815239267694,0,0.307435147943927,0.258428293168221,0,0,0.632073515871632,0,0,1.02131881726136,0.720244376125241,2.8458910432206,3.00071849044229,1.24138163549592,0.891844088010353,1.15184314421485,1.522324745573,0.469343416127421,0,0.220528398054962,0.32977250588296,0.161464426695906,0.0603129249281559,0,0,0.291480836629851,0.370850604021019,0,0.206386867963223,0,0,0,0,0,0.139951452323658,0,0.954670618015114,1.42351197111511,0,0.648032044930808,0.627264888043406,0.655087691238533,1.34864346384821,0.41326727862668,0.523511883968059,0.259229946583586,0,2.25477175473676,1.49516546043979,0,0.583353565032143,0.387479470433193,0.844780627453891,0.821500670520278,0.13020438484395,0.209718688851422,0.241584120826006,0,0.632022241256357,0,0.410843828659309,0.25984164595559,0.358053391334963,0.198681354781265,0,0.147689527174577,0.100966449948148,0,0.100826185136841,0.194915761479505,0.0962118416403295,0,0,0.221985953374065,0.358855426437903,0.335769232728157,1.35232715822533,1.50145980360946,1.64836461840539,0.428736758158132,0,23.7195773899168,14.2700823317225,13.1765968091061,13.2326950404639,6.85082519770642,17.3740596399631,8.10027000278167,14.4102785031751,14.0474146785103,13.9795284172991,1.764384908931,1.59609949360412,1.70733605754134,1.45864030240976,0.628839487883947,1.2869045591501,0.666740183404846,1.85431551515005,1.28367683836726,0.505394423527595,0.25347929989024,0.565879024158229,0.655490552289177,0.384150914429216,0.459483751644906,0,0.927074607558844,0.77163688185482,0.412085900803307,0.294397840268795,1.02860775715625,0.887379030796687,1.1921809497366,1.45346416632329,0.470546902076653,0.25384382367503,0,0.263069711437843,0.814824683075171,1.12228454331548,0.355905054372522,0.591026894253381,1.63692417267876,0.77468420592983,1.15743966588685,2.99772693525535,0.233931608445408,0.429742108096597,0.191288332068843,0.220591419119515,0.231867835620421
|short_description=p@chr8:4258176..4258220,-
|short_description=p@chr8:4258176..4258220,-
}}
}}

Latest revision as of 19:32, 3 August 2015

Short description:p@chr8:4258176..4258220, -
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_at_chr8:4258176..4258220, -
Coexpression cluster:MCL_coexpression_mm9:2465
Association with transcript: NA
EntrezGene:NA
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p@chr8:4258176..4258220-

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.16
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.08
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.17
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A31.96
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.20
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.13
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.73
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.78
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C22.18
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B82.86
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C33.89
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.98
Mouse Astrocytes, donor3.CNhs12107.11633-122C41.44
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.29
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C32.83
Mouse Granule cells, donor2.CNhs12357.11731-123E33.70
Mouse Granule cells, donor3.CNhs12108.11636-122C72.54
Mouse Meningeal cells, donor1.CNhs12132.11716-123C61.69
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C85.69
Mouse Microglia, donor2.CNhs12634.11736-123E813.83
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D54.25
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F511.48
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D95.05
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F11.14
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D51.77
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D24.04
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F24.70
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D69.19
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D33.30
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F32.55
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D71.23
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D42.77
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F45.58
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D86.25
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E41.40
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E51.13
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I63.21
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D64.71
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F62.85
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E12.98
Mouse Schwann, donor1.CNhs12507.11728-123D90.38
Mouse Schwann, donor2.CNhs12573.11746-123F90.30
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.65
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.28
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I71.19
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E31.30
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I81.06
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.42
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.43
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.76
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G32.02
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.00
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D70.15
adrenal gland, embryo E14.CNhs11038.406-44C50.52
adrenal gland, embryo E16.CNhs11004.1254-43D60.91
adrenal gland, embryo E17.CNhs11043.1263-45I10.46
adrenal gland, embryo E18.CNhs11026.1262-18F50.45
adrenal gland, neonate N00.CNhs11191.1311-23C11.18
adrenal gland, neonate N25.CNhs11223.1377-27I30.00
amnion, adult pregnant day17.5.CNhs10488.583-22A80.49
aorta, adult.CNhs10498.46-23H10.00
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.00
bone (os femoris), neonate N16.CNhs11225.1525-43A60.00
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B20.00
cerebellum, neonate N30.CNhs11135.1395-42I20.00
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.36
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.25
corpora quadrigemina, adult.CNhs10501.16-22A40.75
corpus striatum, adult.CNhs10487.19-21D87.78
corpus striatum, neonate N00.CNhs11226.630-43F12.64
cortex, adult.CNhs10473.12-14D56.78
cortex, neonate N30.CNhs11107.1392-42F27.67
diencephalon, adult.CNhs10482.20-12F22.08
diencephalon, neonate N30.CNhs11201.1388-42B23.41
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B11.43
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.12
epididymis, adult.CNhs10490.58-23B20.25
eyeball, adult.CNhs10484.31-12G40.00
eyeball, embryo E12.CNhs11016.345-16C62.08
eyeball, embryo E14.CNhs10521.399-16E20.69
eyeball, embryo E15.CNhs10593.426-16C91.98
eyeball, embryo E17.CNhs11023.1261-18D40.90
eyeball, neonate N00.CNhs11207.633-15C61.50
eyeball, neonate N01.CNhs11140.1532-43E72.18
eyeball, neonate N02.CNhs11205.1551-44G80.66
eyeball, neonate N16.CNhs11188.777-19A20.78
forelimb, embryo E11.CNhs10596.335-25E23.45
forelimb, embryo E12.CNhs10600.359-14H21.51
forelimb, embryo E13.CNhs10589.384-1E20.53
forelimb, embryo E14.CNhs10577.413-26A81.32
forelimb, embryo E15.CNhs11007.437-20E70.56
forelimb, embryo E17.CNhs10598.1517-43C41.04
forelimb, embryo E18.CNhs11008.1520-43B50.21
gonad, embryo E13.CNhs11044.1564-45I61.59
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.41
heart, embryo E12.CNhs11015.353-12F50.00
heart, embryo E13.CNhs11013.376-3I90.36
heart, embryo E14.CNhs10597.403-26D40.47
heart, embryo E15.CNhs11017.431-16C80.39
heart, embryo E16.CNhs11021.457-17C60.77
heart, embryo E17.CNhs11025.479-18E50.47
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.35
heart, neonate N03.CNhs11221.1349-25I20.16
heart, neonate N10.CNhs11118.749-24G10.16
heart, neonate N16.CNhs11209.782-15G10.00
heart, neonate N20.CNhs11127.821-26I60.00
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D20.13
hippocampus, adult.CNhs10478.13-16E85.05
hippocampus, neonate N00.CNhs11228.627-43G15.45
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I51.49
intestine, embryo E13.CNhs11010.381-16D51.39
intestine, embryo E15.CNhs10602.976-16D80.90
intestine, embryo E16.CNhs10585.463-22H40.61
intestine, embryo E17.CNhs10582.482-18D30.67
intestine, embryo E18.CNhs10526.1289-20F70.38
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.82
intestine, neonate N06.CNhs11102.688-20B80.00
intestine, neonate N07.CNhs11095.720-20F20.40
intestine, neonate N10.CNhs11098.755-23A50.19
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.65
intestine, neonate N30.CNhs11131.1384-42G10.00
kidney, embryo E14.CNhs10606.411-4I93.79
kidney, embryo E15.CNhs10997.434-16F80.80
kidney, embryo E16.CNhs10584.464-22A51.13
kidney, embryo E17.CNhs11028.483-18I21.02
kidney, embryo E18.CNhs11001.1288-20C70.58
kidney, neonate N00.CNhs11214.646-21G70.77
kidney, neonate N10.CNhs11206.758-6D50.44
kidney, neonate N20.CNhs11113.832-19I10.30
kidney, neonate N25.CNhs11122.1353-25F30.00
kidney, neonate N30.CNhs11203.1385-42H10.12
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.17
liver, embryo E13.CNhs10524.378-3H60.20
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.16
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.00
lung, embryo E12.CNhs10522.354-16G20.57
lung, embryo E14.CNhs10604.404-26F81.30
lung, embryo E15.CNhs11020.432-17C51.19
lung, embryo E16.CNhs10998.458-17B61.88
lung, embryo E17.CNhs10605.480-44A60.50
lung, embryo E18.CNhs10583.1287-20I60.48
lung, neonate N00.CNhs11224.640-42C60.20
lung, neonate N06.CNhs11212.683-20E50.79
lung, neonate N07.CNhs11111.715-19A30.22
lung, neonate N10.CNhs11219.750-23E60.48
lung, neonate N20.CNhs11109.822-18A40.33
lung, neonate N25.CNhs11119.1359-25C70.35
lung, neonate N30.CNhs11133.1394-42H20.00
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C20.64
medulla oblongata, neonate N30.CNhs11200.1396-42A30.47
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.16
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E11.26
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.39
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E31.72
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D71.43
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.89
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D91.13
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D43.24
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D51.75
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D61.58
olfactory brain, adult.CNhs10489.18-22I93.86
ovary, adult.CNhs10507.91-2I70.71
ovary, embryo E18.CNhs11040.505-44H71.25
ovary, neonate N00.CNhs11217.1299-22I40.81
oviduct, adult pregnant day01.CNhs10500.988-6G62.47
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.24
pancreas, embryo E15.CNhs11042.1556-45F20.30
pancreas, embryo E16.CNhs11003.460-26E50.57
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.31
pancreas, neonate N00.CNhs11105.645-26G90.26
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D80.00
pancreas, neonate N16.CNhs11136.787-43B60.63
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G81.02
pituitary gland, embryo E12.CNhs11018.346-16E60.72
pituitary gland, embryo E13.CNhs11009.370-44C72.85
pituitary gland, embryo E14.CNhs11037.398-44A53.00
pituitary gland, embryo E15.CNhs10592.427-16B91.24
pituitary gland, embryo E16.CNhs11036.449-43F60.89
pituitary gland, embryo E17.CNhs11039.1265-44F51.15
pituitary gland, neonate N00.CNhs11190.1308-22E91.52
placenta, adult pregnant day10.CNhs10472.539-13I70.47
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.22
skin, adult.CNhs10492.30-1C30.33
skin, neonate N00.CNhs11124.650-25G40.16
skin, neonate N03.CNhs11215.662-22H30.06
skin, neonate N06.CNhs11097.693-20I50.00
skin, neonate N10.CNhs11108.762-6C40.00
small intestine, neonate N16.CNhs11114.790-21I10.29
spinal cord, adult.CNhs10505.24-13C90.37
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.21
spleen, embryo E18.CNhs11011.1271-21F20.00
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.14
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.95
stomach, embryo E12.CNhs10588.356-43E31.42
stomach, embryo E15.CNhs10603.1252-16G80.00
stomach, embryo E16.CNhs11022.459-17D40.65
stomach, embryo E17.CNhs11006.1035-18D50.63
stomach, embryo E18.CNhs10999.1286-20C60.66
stomach, neonate N03.CNhs11193.1340-24B81.35
stomach, neonate N07.CNhs11210.718-18A90.41
stomach, neonate N25.CNhs11104.1355-25E40.52
stomach, neonate N30.CNhs11134.1386-42I10.26
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G52.25
testis, embryo E13.CNhs11031.389-23F51.50
testis, embryo E15.CNhs11034.443-27C50.00
testis, embryo E16.CNhs11033.470-26G50.58
testis, embryo E17.CNhs11029.486-18I50.39
testis, embryo E18.CNhs11027.503-18G50.84
testis, neonate N00.CNhs11189.1300-22B70.82
testis, neonate N07.CNhs11222.726-26I40.13
testis, neonate N10.CNhs11204.763-44D90.21
testis, neonate N20.CNhs11110.839-18H30.24
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.63
thymus, embryo E14.CNhs11041.402-44I40.00
thymus, embryo E15.CNhs11005.430-45I20.41
thymus, embryo E16.CNhs11002.456-26C50.26
thymus, embryo E17.CNhs10581.478-18C10.36
thymus, embryo E18.CNhs10595.1273-19G40.20
thymus, neonate N02.CNhs11181.1541-43F80.00
thymus, neonate N03.CNhs11137.2104-43C70.15
thymus, neonate N06.CNhs11197.681-26C40.10
thymus, neonate N07.CNhs11211.713-19D30.00
thymus, neonate N10.CNhs11194.748-24E40.10
thymus, neonate N20.CNhs11186.820-7A20.19
thymus, neonate N25.CNhs11125.1362-25G70.10
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B40.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.22
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.36
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.34
urinary bladder, adult.CNhs10481.879-12E41.35
uterus, adult pregnant day19.CNhs10497.590-15F51.50
uterus, adult.CNhs10509.92-27E51.65
vagina, adult.CNhs10502.89-27D50.43
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A123.72
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A214.27
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A313.18
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D713.23
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A46.85
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A517.37
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A68.10
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A714.41
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A814.05
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A913.98
whole body, embryo E11.CNhs11014.324-5I81.76
whole body, embryo E12.CNhs10587.857-27C91.60
whole body, embryo E13.CNhs10512.372-23H21.71
whole body, embryo E14.5.CNhs10578.420-27D21.46
whole body, embryo E14.CNhs10519.395-14B10.63
whole body, embryo E16.CNhs10514.453-14F21.29
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.67
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G51.85
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G51.28
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.51
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.25
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.57
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.66
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.38
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.46
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.93
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.77
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.29
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G51.03
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.89
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G51.19
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G51.45
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.47
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.25
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.26
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.81
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G51.12
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.36
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.59
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G51.64
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.77
whole body, embryo E17.5.CNhs10513.490-9F91.16
whole body, embryo E17.CNhs10517.475-3I53.00
whole body, embryo E18.CNhs10516.493-3B30.23
whole body, neonate N00.CNhs10525.657-19C20.43
whole body, neonate N01.CNhs10576.659-23C60.19
whole body, neonate N06.CNhs10515.692-21D10.22
whole body, neonate N10.CNhs10518.761-6B40.23





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Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
central nervous system3.03e-3673
nervous system1.07e-3475
gray matter5.75e-3134
regional part of nervous system6.16e-3054
regional part of forebrain1.71e-2939
forebrain1.71e-2939
future forebrain1.71e-2939
anterior neural tube2.18e-2840
brain grey matter1.30e-2729
regional part of telencephalon1.30e-2729
telencephalon1.30e-2729
ectoderm-derived structure1.58e-2795
ectoderm1.58e-2795
presumptive ectoderm1.58e-2795
neural tube4.95e-2752
neural rod4.95e-2752
future spinal cord4.95e-2752
neural keel4.95e-2752
pre-chordal neural plate2.83e-2649
neurectoderm2.89e-2664
neural plate2.89e-2664
presumptive neural plate2.89e-2664
brain3.14e-2547
future brain3.14e-2547
regional part of brain2.43e-2446
cerebral cortex6.72e-2221
cerebral hemisphere6.72e-2221
pallium6.72e-2221
ecto-epithelium7.63e-2173
regional part of cerebral cortex4.71e-1817
structure with developmental contribution from neural crest9.65e-1492
occipital lobe5.98e-1210
visual cortex5.98e-1210
neocortex5.98e-1210
Ammon's horn1.52e-077
lobe parts of cerebral cortex1.52e-077
hippocampal formation1.52e-077
limbic system1.52e-077
limbic lobe1.52e-077
tube5.31e-07114
basal ganglion6.73e-078
nuclear complex of neuraxis6.73e-078
aggregate regional part of brain6.73e-078
collection of basal ganglia6.73e-078
cerebral subcortex6.73e-078
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