FFCP PHASE1:Mm9::chr9:111214071..111214090,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|EntrezGene=320429|HGNC=|UniProt=Q8BV79|association_with_transcript=-152bp_to_ENSMUST00000078626,NM_001164659,uc009rvt.2,uc012hbq.1_5end|description=CAGE_peak_4_at_Trank1_5end|id=chr9:111214071..111214090,+|ontology_enrichment_celltype=CL:0000117!8.53e-08!23;CL:0000337!8.53e-08!23|ontology_enrichment_celltype_v019_2=CL:0000117,5.89e-07,23;CL:0000337,5.89e-07,23|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002346!5.64e-17!71;UBERON:0003075!5.64e-17!71;UBERON:0007284!5.64e-17!71;UBERON:0000991!1.90e-13!18;UBERON:0005564!1.90e-13!18;UBERON:0002020!2.92e-13!34;UBERON:0001049!4.52e-13!52;UBERON:0005068!4.52e-13!52;UBERON:0006241!4.52e-13!52;UBERON:0007135!4.52e-13!52;UBERON:0004176!1.22e-12!17;UBERON:0009196!1.22e-12!17;UBERON:0009117!1.22e-12!17;UBERON:0004121!2.32e-12!102;UBERON:0000924!2.32e-12!102;UBERON:0006601!2.32e-12!102;UBERON:0003135!5.09e-12!15;UBERON:0001017!3.10e-11!73;UBERON:0005743!3.10e-11!73;UBERON:0000473!4.21e-11!14;UBERON:0003133!4.47e-11!24;UBERON:0003101!7.03e-11!16;UBERON:0000079!7.03e-11!16;UBERON:0000955!7.91e-11!50;UBERON:0006238!7.91e-11!50;UBERON:0000073!1.60e-10!75;UBERON:0001016!1.60e-10!75;UBERON:0005156!2.18e-10!26;UBERON:0000990!2.18e-10!26;UBERON:0002616!3.77e-10!49;UBERON:0002791!4.72e-10!29;UBERON:0003528!4.72e-10!29;UBERON:0001893!4.72e-10!29;UBERON:0000033!7.04e-10!63;UBERON:0003056!2.64e-09!49;UBERON:0003080!1.02e-08!40;UBERON:0002780!3.36e-08!39;UBERON:0001890!3.36e-08!39;UBERON:0006240!3.36e-08!39;UBERON:0002619!2.14e-07!17;UBERON:0002021!3.50e-07!10;UBERON:0000411!3.50e-07!10;UBERON:0001950!3.50e-07!10;UBERON:0002369!6.03e-07!7;UBERON:0006858!6.03e-07!7|ontology_enrichment_uberon_v019_2=UBERON:0000991,4.14e-20,18;UBERON:0005564,4.14e-20,18;UBERON:0003135,7.61e-20,15;UBERON:0004176,9.46e-19,17;UBERON:0009196,9.46e-19,17;UBERON:0009117,9.46e-19,17;UBERON:0003101,2.48e-18,16;UBERON:0000079,2.48e-18,16;UBERON:0000473,2.80e-18,14;UBERON:0003133,6.12e-18,24;UBERON:0005156,3.90e-16,26;UBERON:0000990,3.90e-16,26;UBERON:0002020,1.42e-15,34;UBERON:0000073,8.31e-15,54;UBERON:0001049,1.78e-14,52;UBERON:0005068,1.78e-14,52;UBERON:0006241,1.78e-14,52;UBERON:0007135,1.78e-14,52;UBERON:0001017,8.76e-13,73;UBERON:0001016,3.30e-12,75;UBERON:0000955,1.37e-11,47;UBERON:0006238,1.37e-11,47;UBERON:0010314,1.93e-11,92;UBERON:0002346,2.50e-11,64;UBERON:0003075,2.50e-11,64;UBERON:0007284,2.50e-11,64;UBERON:0002021,3.99e-11,10;UBERON:0000411,3.99e-11,10;UBERON:0001950,3.99e-11,10;UBERON:0002369,1.00e-10,7;UBERON:0006858,1.00e-10,7;UBERON:0003528,1.01e-10,29;UBERON:0002791,1.01e-10,29;UBERON:0001893,1.01e-10,29;UBERON:0002616,1.31e-10,46;UBERON:0003064,1.99e-09,14;UBERON:0003886,2.57e-09,38;UBERON:0010371,5.33e-09,73;UBERON:0002553,5.98e-09,39;UBERON:0002619,9.83e-09,17;UBERON:0003080,1.38e-08,40;UBERON:0004121,1.39e-08,95;UBERON:0000924,1.39e-08,95;UBERON:0006601,1.39e-08,95;UBERON:0002323,2.34e-08,37;UBERON:0004458,2.34e-08,37;UBERON:0000956,5.83e-08,21;UBERON:0001869,5.83e-08,21;UBERON:0000203,5.83e-08,21;UBERON:0002780,7.19e-08,39;UBERON:0001890,7.19e-08,39;UBERON:0006240,7.19e-08,39;UBERON:0003076,1.31e-07,12;UBERON:0003057,1.31e-07,12;UBERON:0001948,3.37e-07,5;UBERON:0002315,3.37e-07,5;UBERON:0003056,5.82e-07,49|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.06155844543851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.21389876515759,1.5869729378161,3.1691570175309,0,0,0,0,0,0,0,0,0,0,2.28520787523043,2.42955395046775,0.367472397644862,0.191690942036473,2.75765635983006,0,1.40456071893706,0.921639199537461,1.45074916503213,1.00636407962651,0.52091337055676,0.837548997004143,0.56276261003168,1.83357897332172,3.83017161115768,5.12538050876771,1.67759501242771,0,0,0,0,0,0,0,0,0.280888840263504,0,0,0,0,0,0,0,0,0,0,0.79928715803342,0,35.7745555146228,3.29622120855658,1.82679286987285,3.68984795609694,5.27529241934179,5.52666923537813,8.92232798440696,0.247194967734374,0,0,0,0,0,0,1.46390398505774,2.93225389538837,0,0,0,0,2.24685959107234,5.49000723382352,5.78010019719176,3.30266208365325,3.06858548796397,0.83115217823824,2.92034273521964,1.01839363850316,3.4833951770826,17.6905930903572,0.210441855886474,0,0,0,0.30140963567143,0.612328492361951,0.512454881139399,0.749613796477831,2.06962696591213,0.215567992932842,0,0,0,0,0,0,5.37392520409932,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.41608891984667,0.617427674275707,0,0,0,0.232236671860439,0,0,0,0,0,0,0,0.397912944082302,0,0,0,0,0.189667900953082,0.342745537829186,0,0,0,0.0701358198903186,0.126473074248515,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.325929952884052,0,0,0,0.476087281772027,0,0,0,0,0.163863314715738,0,0,0,0,0,0,1.28440471990234,1.17211686592203,0,0,0,0,0,0,0,0,0.404810701674894,0,0.790575555893047,9.3183181762324,0.851640511249612,2.67098405500883,1.30309567482861,0.164970122972535,1.32745138339963,0.242780636154981,0,0,0,0,0.258428293168221,0,0,0,0,0,0,0,0,0,0,0.178368817602071,0,0.304464949114599,0,1.69465656691056,0,0,0,0,0,0,0,0.927126510052548,0,0.412773735926445,0.370389054739423,0,0,0,0,0,0,0,0,0,0.108005340821801,0,0,0,0.0826534557253359,0,0,0,6.76431526421028,11.6622905914303,7.61109056102649,5.83353565032143,6.58715099736429,8.10989402355735,21.3590174335272,37.8894759895895,41.6291597370072,16.9108884578204,8.92893019399383,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.221985953374065,0,0,0,0,0,0,0,1.12950368523413,1.38097570952153,1.71868654031819,3.26521046453006,1.37016503954128,2.2661816921691,2.70009000092722,1.80128481289688,1.35942722695261,2.07104124700728,0,0,0,0.243106717068294,0.209613162627982,0.919217542250071,0.666740183404846,0.618105171716683,0,0.505394423527595,0.50695859978048,0.754505365544305,0.655490552289177,0.640251524048693,0.459483751644906,0.476293691283074,0.579421629724277,1.92909220463705,0,0.735994600671987,0,0.532427418478012,0.476872379894642,0.581385666529314,0.376437521661322,0.423073039458382,0.182927972872773,1.57841826862706,0.135804113845862,0,0.593175090620871,0.492522411877817,0.409231043169689,0.309873682371932,0.578719832943424,0.499621155875892,0.467863216890817,0.214871054048298,0.191288332068843,0.441182838239031,0|short_description=p4@Trank1}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:320429 | |||
|HGNC= | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:Q8BV79 | |||
|association_with_transcript=-152bp_to_ENSMUST00000078626,NM_001164659,uc009rvt.2,uc012hbq.1_5end | |||
|cluster_id=chr9:111214071..111214090,+ | |||
|description=CAGE_peak_4_at_Trank1_5end | |||
|id=chr9:111214071..111214090,+ | |||
|ontology_enrichment_celltype=CL:0000117!8.53e-08!23;CL:0000337!8.53e-08!23 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,5.89e-07,23;CL:0000337,5.89e-07,23 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002346!5.64e-17!71;UBERON:0003075!5.64e-17!71;UBERON:0007284!5.64e-17!71;UBERON:0000991!1.90e-13!18;UBERON:0005564!1.90e-13!18;UBERON:0002020!2.92e-13!34;UBERON:0001049!4.52e-13!52;UBERON:0005068!4.52e-13!52;UBERON:0006241!4.52e-13!52;UBERON:0007135!4.52e-13!52;UBERON:0004176!1.22e-12!17;UBERON:0009196!1.22e-12!17;UBERON:0009117!1.22e-12!17;UBERON:0004121!2.32e-12!102;UBERON:0000924!2.32e-12!102;UBERON:0006601!2.32e-12!102;UBERON:0003135!5.09e-12!15;UBERON:0001017!3.10e-11!73;UBERON:0005743!3.10e-11!73;UBERON:0000473!4.21e-11!14;UBERON:0003133!4.47e-11!24;UBERON:0003101!7.03e-11!16;UBERON:0000079!7.03e-11!16;UBERON:0000955!7.91e-11!50;UBERON:0006238!7.91e-11!50;UBERON:0000073!1.60e-10!75;UBERON:0001016!1.60e-10!75;UBERON:0005156!2.18e-10!26;UBERON:0000990!2.18e-10!26;UBERON:0002616!3.77e-10!49;UBERON:0002791!4.72e-10!29;UBERON:0003528!4.72e-10!29;UBERON:0001893!4.72e-10!29;UBERON:0000033!7.04e-10!63;UBERON:0003056!2.64e-09!49;UBERON:0003080!1.02e-08!40;UBERON:0002780!3.36e-08!39;UBERON:0001890!3.36e-08!39;UBERON:0006240!3.36e-08!39;UBERON:0002619!2.14e-07!17;UBERON:0002021!3.50e-07!10;UBERON:0000411!3.50e-07!10;UBERON:0001950!3.50e-07!10;UBERON:0002369!6.03e-07!7;UBERON:0006858!6.03e-07!7 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000991,4.14e-20,18;UBERON:0005564,4.14e-20,18;UBERON:0003135,7.61e-20,15;UBERON:0004176,9.46e-19,17;UBERON:0009196,9.46e-19,17;UBERON:0009117,9.46e-19,17;UBERON:0003101,2.48e-18,16;UBERON:0000079,2.48e-18,16;UBERON:0000473,2.80e-18,14;UBERON:0003133,6.12e-18,24;UBERON:0005156,3.90e-16,26;UBERON:0000990,3.90e-16,26;UBERON:0002020,1.42e-15,34;UBERON:0000073,8.31e-15,54;UBERON:0001049,1.78e-14,52;UBERON:0005068,1.78e-14,52;UBERON:0006241,1.78e-14,52;UBERON:0007135,1.78e-14,52;UBERON:0001017,8.76e-13,73;UBERON:0001016,3.30e-12,75;UBERON:0000955,1.37e-11,47;UBERON:0006238,1.37e-11,47;UBERON:0010314,1.93e-11,92;UBERON:0002346,2.50e-11,64;UBERON:0003075,2.50e-11,64;UBERON:0007284,2.50e-11,64;UBERON:0002021,3.99e-11,10;UBERON:0000411,3.99e-11,10;UBERON:0001950,3.99e-11,10;UBERON:0002369,1.00e-10,7;UBERON:0006858,1.00e-10,7;UBERON:0003528,1.01e-10,29;UBERON:0002791,1.01e-10,29;UBERON:0001893,1.01e-10,29;UBERON:0002616,1.31e-10,46;UBERON:0003064,1.99e-09,14;UBERON:0003886,2.57e-09,38;UBERON:0010371,5.33e-09,73;UBERON:0002553,5.98e-09,39;UBERON:0002619,9.83e-09,17;UBERON:0003080,1.38e-08,40;UBERON:0004121,1.39e-08,95;UBERON:0000924,1.39e-08,95;UBERON:0006601,1.39e-08,95;UBERON:0002323,2.34e-08,37;UBERON:0004458,2.34e-08,37;UBERON:0000956,5.83e-08,21;UBERON:0001869,5.83e-08,21;UBERON:0000203,5.83e-08,21;UBERON:0002780,7.19e-08,39;UBERON:0001890,7.19e-08,39;UBERON:0006240,7.19e-08,39;UBERON:0003076,1.31e-07,12;UBERON:0003057,1.31e-07,12;UBERON:0001948,3.37e-07,5;UBERON:0002315,3.37e-07,5;UBERON:0003056,5.82e-07,49 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.06155844543851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.21389876515759,1.5869729378161,3.1691570175309,0,0,0,0,0,0,0,0,0,0,2.28520787523043,2.42955395046775,0.367472397644862,0.191690942036473,2.75765635983006,0,1.40456071893706,0.921639199537461,1.45074916503213,1.00636407962651,0.52091337055676,0.837548997004143,0.56276261003168,1.83357897332172,3.83017161115768,5.12538050876771,1.67759501242771,0,0,0,0,0,0,0,0,0.280888840263504,0,0,0,0,0,0,0,0,0,0,0.79928715803342,0,35.7745555146228,3.29622120855658,1.82679286987285,3.68984795609694,5.27529241934179,5.52666923537813,8.92232798440696,0.247194967734374,0,0,0,0,0,0,1.46390398505774,2.93225389538837,0,0,0,0,2.24685959107234,5.49000723382352,5.78010019719176,3.30266208365325,3.06858548796397,0.83115217823824,2.92034273521964,1.01839363850316,3.4833951770826,17.6905930903572,0.210441855886474,0,0,0,0.30140963567143,0.612328492361951,0.512454881139399,0.749613796477831,2.06962696591213,0.215567992932842,0,0,0,0,0,0,5.37392520409932,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.41608891984667,0.617427674275707,0,0,0,0.232236671860439,0,0,0,0,0,0,0,0.397912944082302,0,0,0,0,0.189667900953082,0.342745537829186,0,0,0,0.0701358198903186,0.126473074248515,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.325929952884052,0,0,0,0.476087281772027,0,0,0,0,0.163863314715738,0,0,0,0,0,0,1.28440471990234,1.17211686592203,0,0,0,0,0,0,0,0,0.404810701674894,0,0.790575555893047,9.3183181762324,0.851640511249612,2.67098405500883,1.30309567482861,0.164970122972535,1.32745138339963,0.242780636154981,0,0,0,0,0.258428293168221,0,0,0,0,0,0,0,0,0,0,0.178368817602071,0,0.304464949114599,0,1.69465656691056,0,0,0,0,0,0,0,0.927126510052548,0,0.412773735926445,0.370389054739423,0,0,0,0,0,0,0,0,0,0.108005340821801,0,0,0,0.0826534557253359,0,0,0,6.76431526421028,11.6622905914303,7.61109056102649,5.83353565032143,6.58715099736429,8.10989402355735,21.3590174335272,37.8894759895895,41.6291597370072,16.9108884578204,8.92893019399383,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.221985953374065,0,0,0,0,0,0,0,1.12950368523413,1.38097570952153,1.71868654031819,3.26521046453006,1.37016503954128,2.2661816921691,2.70009000092722,1.80128481289688,1.35942722695261,2.07104124700728,0,0,0,0.243106717068294,0.209613162627982,0.919217542250071,0.666740183404846,0.618105171716683,0,0.505394423527595,0.50695859978048,0.754505365544305,0.655490552289177,0.640251524048693,0.459483751644906,0.476293691283074,0.579421629724277,1.92909220463705,0,0.735994600671987,0,0.532427418478012,0.476872379894642,0.581385666529314,0.376437521661322,0.423073039458382,0.182927972872773,1.57841826862706,0.135804113845862,0,0.593175090620871,0.492522411877817,0.409231043169689,0.309873682371932,0.578719832943424,0.499621155875892,0.467863216890817,0.214871054048298,0.191288332068843,0.441182838239031,0 | |||
|short_description=p4@Trank1 | |||
}} |
Revision as of 15:55, 4 August 2015
Short description: | p4@Trank1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_Trank1_5end |
Coexpression cluster: | NA |
Association with transcript: | -152bp_to_ENSMUST00000078626, NM_001164659, uc009rvt.2, uc012hbq.1_5end |
EntrezGene: | 320429 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 5.89e-07 | 23 |
neuroblast (sensu Vertebrata) | 5.89e-07 | 23 |