FFCP PHASE1:Mm9::chr6:119280741..119280818,-: Difference between revisions
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{{FFCP|EntrezGene=211187|HGNC=|MCL_coexpression_id=1|UniProt=Q8BGX3|association_with_transcript=0bp_to_ENSMUST00000068351,NM_172492,uc009dmb.2,uc009dmc.2_5end|description=CAGE_peak_1_at_Lrtm2_5end|id=chr6:119280741..119280818,-|ontology_enrichment_celltype=CL:0000117!4.09e-13!23;CL:0000337!4.09e-13!23;CL:0000221!1.18e-08!44;CL:0000133!1.18e-08!44;CL:0002319!3.28e-08!43;CL:0000540!1.21e-07!33;CL:0000047!1.21e-07!33;CL:0000031!1.21e-07!33;CL:0000404!1.21e-07!33|ontology_enrichment_celltype_v019_2=CL:0000117,1.96e-16,23;CL:0000337,1.96e-16,23;CL:0000221,1.42e-13,44;CL:0000133,1.42e-13,44;CL:0002319,7.41e-13,43;CL:0000540,8.66e-11,33;CL:0000047,8.66e-11,33;CL:0000031,8.66e-11,33;CL:0000404,8.66e-11,33;CL:0000393,3.55e-08,39;CL:0000211,3.55e-08,39|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000033!3.03e-27!63;UBERON:0001017!1.18e-24!73;UBERON:0005743!1.18e-24!73;UBERON:0001049!1.36e-24!52;UBERON:0005068!1.36e-24!52;UBERON:0006241!1.36e-24!52;UBERON:0007135!1.36e-24!52;UBERON:0000955!4.87e-24!50;UBERON:0006238!4.87e-24!50;UBERON:0000073!3.28e-23!75;UBERON:0001016!3.28e-23!75;UBERON:0002616!3.47e-23!49;UBERON:0003056!5.76e-21!49;UBERON:0002020!5.92e-21!34;UBERON:0004121!1.63e-20!102;UBERON:0000924!1.63e-20!102;UBERON:0006601!1.63e-20!102;UBERON:0002346!1.98e-20!71;UBERON:0003075!1.98e-20!71;UBERON:0007284!1.98e-20!71;UBERON:0003080!3.01e-18!40;UBERON:0002791!7.28e-18!29;UBERON:0003528!7.28e-18!29;UBERON:0001893!7.28e-18!29;UBERON:0002780!1.67e-17!39;UBERON:0001890!1.67e-17!39;UBERON:0006240!1.67e-17!39;UBERON:0007811!1.03e-13!86;UBERON:0000956!8.29e-13!21;UBERON:0001869!8.29e-13!21;UBERON:0000203!8.29e-13!21;UBERON:0002619!4.29e-12!17;UBERON:0000153!5.14e-11!94;UBERON:0002021!1.04e-08!10;UBERON:0000411!1.04e-08!10;UBERON:0001950!1.04e-08!10;UBERON:0000025!3.93e-08!114;UBERON:0004111!4.38e-08!122;UBERON:0003076!6.17e-07!12;UBERON:0003057!6.17e-07!12|ontology_enrichment_uberon_v019_2=UBERON:0001017,1.57e-36,73;UBERON:0000073,7.53e-36,54;UBERON:0001016,4.30e-35,75;UBERON:0004121,2.42e-34,95;UBERON:0000924,2.42e-34,95;UBERON:0006601,2.42e-34,95;UBERON:0001049,5.48e-33,52;UBERON:0005068,5.48e-33,52;UBERON:0006241,5.48e-33,52;UBERON:0007135,5.48e-33,52;UBERON:0002346,9.58e-33,64;UBERON:0003075,9.58e-33,64;UBERON:0007284,9.58e-33,64;UBERON:0010371,8.63e-30,73;UBERON:0002020,1.42e-28,34;UBERON:0000955,3.55e-28,47;UBERON:0006238,3.55e-28,47;UBERON:0002616,6.40e-27,46;UBERON:0003056,9.40e-25,49;UBERON:0003528,1.01e-23,29;UBERON:0002791,1.01e-23,29;UBERON:0001893,1.01e-23,29;UBERON:0003080,9.40e-23,40;UBERON:0002780,1.22e-21,39;UBERON:0001890,1.22e-21,39;UBERON:0006240,1.22e-21,39;UBERON:0010314,2.44e-20,92;UBERON:0002619,2.75e-18,17;UBERON:0000956,7.46e-16,21;UBERON:0001869,7.46e-16,21;UBERON:0000203,7.46e-16,21;UBERON:0002021,6.45e-13,10;UBERON:0000411,6.45e-13,10;UBERON:0001950,6.45e-13,10;UBERON:0000025,1.19e-11,114;UBERON:0004111,1.75e-11,122;UBERON:0003076,1.42e-10,12;UBERON:0003057,1.42e-10,12;UBERON:0002420,4.44e-09,8;UBERON:0007245,4.44e-09,8;UBERON:0010009,4.44e-09,8;UBERON:0010011,4.44e-09,8;UBERON:0000454,4.44e-09,8;UBERON:0011216,1.70e-07,194;UBERON:0002240,4.92e-07,6;UBERON:0005174,4.92e-07,6;UBERON:0001137,4.92e-07,6;UBERON:0001954,6.45e-07,7;UBERON:0003022,6.45e-07,7;UBERON:0002421,6.45e-07,7;UBERON:0000349,6.45e-07,7;UBERON:0002600,6.45e-07,7|phase1_expression=10.5698239089164,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.33424243480484,0.0992909512008853,0,0,0.22940928106717,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,12.209408757305,3.29529274101708,4.47188767870852,2.51975558925653,15.8127820801469,0,0,0,0,0.286533439938757,0,4.45096213891115,6.87688273053643,5.07065122804943,0.677689064138264,0.889294796111139,0,0,0,0,1.53687322128622,0.311068836925433,0.540023753326763,0.630974884054146,10.5690864229407,13.4729809980484,3.1847607795888,2.58782771749238,7.35375029288017,69.3730050296149,66.2697284662124,55.9127781052726,4.3522474950964,5.85520919055422,2.08365348222704,36.8521558681823,30.3891809417107,33.6156145108982,14.142172102736,11.10499110233,6.52398060388552,0,0,0.289864488701678,0,0,0,0,0,2.24711072210803,0,0,0,5.7745802108439,0,0,0,0.432982082022428,0.253359865475099,0,0.91347103775248,0,0,0.173485326766136,0,0,0,0,0,5.19109432242185,0.144599356919912,0,0.485300549842228,0,0,0,14.6390398505774,14.0329293565015,0,0,0,0,38.046822408825,52.612569324142,14.1989417887537,44.4990259692228,37.0787413128979,41.7653969564716,36.0175604010422,0.101839363850316,0,0,2.31486041475121,0.130120442962704,0.459804208866946,0.360124259610698,1.20563854268572,1.76894897793452,1.92170580427275,3.84177070694888,7.76110112217047,0,0,0,0,0,0.348252166522167,0,0,0,0,0,0,0.234526059981096,0,0.23674473558521,0,0,0,0.268273401399619,0.116765342367169,0,0,0,0,0,0.268412837520744,26.0759536219518,3.08713837137853,0,0,0.213288250535234,0.464473343720877,0.38660238396628,0.201683524623343,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.210407459670956,0.189709611372772,0.147610147979602,0.47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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:211187 | |||
|HGNC= | |||
|MCL_coexpression_id=1 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:Q8BGX3 | |||
|association_with_transcript=0bp_to_ENSMUST00000068351,NM_172492,uc009dmb.2,uc009dmc.2_5end | |||
|cluster_id=chr6:119280741..119280818,- | |||
|description=CAGE_peak_1_at_Lrtm2_5end | |||
|id=chr6:119280741..119280818,- | |||
|ontology_enrichment_celltype=CL:0000117!4.09e-13!23;CL:0000337!4.09e-13!23;CL:0000221!1.18e-08!44;CL:0000133!1.18e-08!44;CL:0002319!3.28e-08!43;CL:0000540!1.21e-07!33;CL:0000047!1.21e-07!33;CL:0000031!1.21e-07!33;CL:0000404!1.21e-07!33 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,1.96e-16,23;CL:0000337,1.96e-16,23;CL:0000221,1.42e-13,44;CL:0000133,1.42e-13,44;CL:0002319,7.41e-13,43;CL:0000540,8.66e-11,33;CL:0000047,8.66e-11,33;CL:0000031,8.66e-11,33;CL:0000404,8.66e-11,33;CL:0000393,3.55e-08,39;CL:0000211,3.55e-08,39 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000033!3.03e-27!63;UBERON:0001017!1.18e-24!73;UBERON:0005743!1.18e-24!73;UBERON:0001049!1.36e-24!52;UBERON:0005068!1.36e-24!52;UBERON:0006241!1.36e-24!52;UBERON:0007135!1.36e-24!52;UBERON:0000955!4.87e-24!50;UBERON:0006238!4.87e-24!50;UBERON:0000073!3.28e-23!75;UBERON:0001016!3.28e-23!75;UBERON:0002616!3.47e-23!49;UBERON:0003056!5.76e-21!49;UBERON:0002020!5.92e-21!34;UBERON:0004121!1.63e-20!102;UBERON:0000924!1.63e-20!102;UBERON:0006601!1.63e-20!102;UBERON:0002346!1.98e-20!71;UBERON:0003075!1.98e-20!71;UBERON:0007284!1.98e-20!71;UBERON:0003080!3.01e-18!40;UBERON:0002791!7.28e-18!29;UBERON:0003528!7.28e-18!29;UBERON:0001893!7.28e-18!29;UBERON:0002780!1.67e-17!39;UBERON:0001890!1.67e-17!39;UBERON:0006240!1.67e-17!39;UBERON:0007811!1.03e-13!86;UBERON:0000956!8.29e-13!21;UBERON:0001869!8.29e-13!21;UBERON:0000203!8.29e-13!21;UBERON:0002619!4.29e-12!17;UBERON:0000153!5.14e-11!94;UBERON:0002021!1.04e-08!10;UBERON:0000411!1.04e-08!10;UBERON:0001950!1.04e-08!10;UBERON:0000025!3.93e-08!114;UBERON:0004111!4.38e-08!122;UBERON:0003076!6.17e-07!12;UBERON:0003057!6.17e-07!12 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,1.57e-36,73;UBERON:0000073,7.53e-36,54;UBERON:0001016,4.30e-35,75;UBERON:0004121,2.42e-34,95;UBERON:0000924,2.42e-34,95;UBERON:0006601,2.42e-34,95;UBERON:0001049,5.48e-33,52;UBERON:0005068,5.48e-33,52;UBERON:0006241,5.48e-33,52;UBERON:0007135,5.48e-33,52;UBERON:0002346,9.58e-33,64;UBERON:0003075,9.58e-33,64;UBERON:0007284,9.58e-33,64;UBERON:0010371,8.63e-30,73;UBERON:0002020,1.42e-28,34;UBERON:0000955,3.55e-28,47;UBERON:0006238,3.55e-28,47;UBERON:0002616,6.40e-27,46;UBERON:0003056,9.40e-25,49;UBERON:0003528,1.01e-23,29;UBERON:0002791,1.01e-23,29;UBERON:0001893,1.01e-23,29;UBERON:0003080,9.40e-23,40;UBERON:0002780,1.22e-21,39;UBERON:0001890,1.22e-21,39;UBERON:0006240,1.22e-21,39;UBERON:0010314,2.44e-20,92;UBERON:0002619,2.75e-18,17;UBERON:0000956,7.46e-16,21;UBERON:0001869,7.46e-16,21;UBERON:0000203,7.46e-16,21;UBERON:0002021,6.45e-13,10;UBERON:0000411,6.45e-13,10;UBERON:0001950,6.45e-13,10;UBERON:0000025,1.19e-11,114;UBERON:0004111,1.75e-11,122;UBERON:0003076,1.42e-10,12;UBERON:0003057,1.42e-10,12;UBERON:0002420,4.44e-09,8;UBERON:0007245,4.44e-09,8;UBERON:0010009,4.44e-09,8;UBERON:0010011,4.44e-09,8;UBERON:0000454,4.44e-09,8;UBERON:0011216,1.70e-07,194;UBERON:0002240,4.92e-07,6;UBERON:0005174,4.92e-07,6;UBERON:0001137,4.92e-07,6;UBERON:0001954,6.45e-07,7;UBERON:0003022,6.45e-07,7;UBERON:0002421,6.45e-07,7;UBERON:0000349,6.45e-07,7;UBERON:0002600,6.45e-07,7 | |||
|phase1_expression=10.5698239089164,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.33424243480484,0.0992909512008853,0,0,0.22940928106717,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,12.209408757305,3.29529274101708,4.47188767870852,2.51975558925653,15.8127820801469,0,0,0,0,0.286533439938757,0,4.45096213891115,6.87688273053643,5.07065122804943,0.677689064138264,0.889294796111139,0,0,0,0,1.53687322128622,0.311068836925433,0.540023753326763,0.630974884054146,10.5690864229407,13.4729809980484,3.1847607795888,2.58782771749238,7.35375029288017,69.3730050296149,66.2697284662124,55.9127781052726,4.3522474950964,5.85520919055422,2.08365348222704,36.8521558681823,30.3891809417107,33.6156145108982,14.142172102736,11.10499110233,6.52398060388552,0,0,0.289864488701678,0,0,0,0,0,2.24711072210803,0,0,0,5.7745802108439,0,0,0,0.432982082022428,0.253359865475099,0,0.91347103775248,0,0,0.173485326766136,0,0,0,0,0,5.19109432242185,0.144599356919912,0,0.485300549842228,0,0,0,14.6390398505774,14.0329293565015,0,0,0,0,38.046822408825,52.612569324142,14.1989417887537,44.4990259692228,37.0787413128979,41.7653969564716,36.0175604010422,0.101839363850316,0,0,2.31486041475121,0.130120442962704,0.459804208866946,0.360124259610698,1.20563854268572,1.76894897793452,1.92170580427275,3.84177070694888,7.76110112217047,0,0,0,0,0,0.348252166522167,0,0,0,0,0,0,0.234526059981096,0,0.23674473558521,0,0,0,0.268273401399619,0.116765342367169,0,0,0,0,0,0.268412837520744,26.0759536219518,3.08713837137853,0,0,0.213288250535234,0.464473343720877,0.38660238396628,0.201683524623343,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.210407459670956,0.189709611372772,0.147610147979602,0.470996183524124,0,0,0.166845105716094,0.393117990226406,0,0,0,0,0,0,0,1.43768206527355,0,0,0,0,1.92977408545347,3.51031061316549,0,0,0.169745085775188,0,0,0,0.195133647857799,0.472905432318573,0.664394068946325,1.59454768657487,1.80249646187312,0.690739927463582,1.88043776155965,0,0,0,0,26.972499117949,22.3874321391108,0,0.252470927204373,0,0,0,0,0,0,0,0.292255857911312,0,54.6246237917072,0.283880170416537,0.534196811001766,0.162886959353576,0,0,0.971122544619926,0.906970670894253,0.188605079755898,0.295301892880773,0.922305443831782,0.775284879504663,0,0,0,0,0,0,0,0,0.428674070063185,2.6601035046341,1.60531935841864,0.658196082408484,0.608929898229199,0,0,0,0.16488625294148,0.322928853391811,0,0,0,0,31.1514507377656,0,0,0,0,0,0,0,0,0,1.90934123603023,0.158167996790568,0.406638934253697,0.216010681643603,0,0,0,0,0.523511883968059,0,0,0,0.149516546043979,0.496375471371293,0.388902376688095,0.258319646955462,0,0.117357238645754,0,0,0.483168241652012,0,0,0,0,0,0,0,0,0,0,0,0.100826185136841,0.0974578807397524,0,0,0.226730383615211,0,0,0,0,0.750729901804728,1.46521299413812,0.643105137237198,0,30.4965995013216,28.0798394269378,27.498984645091,43.994414679984,36.9944560676147,45.323633843382,40.5013500139084,45.9327627288705,39.87653199061,42.4563455636492,0,0,0.170733605754134,1.45864030240976,0.628839487883947,0.919217542250071,0.44449345560323,0.618105171716683,1.28367683836726,1.01078884705519,1.52087579934144,1.50901073108861,0.561849044819294,1.08842759088278,0.631790158511746,0,0.811190281613988,0.964546102318525,0.412085900803307,1.17759136107518,1.02860775715625,0.70990322463735,0.715308569841963,1.74415699958794,0.564656282491984,0.592302255241736,0.914639864363863,0.526139422875686,0.814824683075171,0,0.474540072496697,1.18205378850676,0.409231043169689,1.23949472948773,1.15743966588685,1.99848462350357,1.16965804222704,0.644613162144895,0.57386499620653,0.441182838239031,0.231867835620421 | |||
|short_description=p1@Lrtm2 | |||
}} |
Revision as of 00:21, 5 August 2015
Short description: | p1@Lrtm2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Lrtm2_5end |
Coexpression cluster: | MCL_coexpression_mm9:1 |
Association with transcript: | 0bp_to_ENSMUST00000068351, NM_172492, uc009dmb.2, uc009dmc.2_5end |
EntrezGene: | 211187 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 1.96e-16 | 23 |
neuroblast (sensu Vertebrata) | 1.96e-16 | 23 |
ectodermal cell | 1.42e-13 | 44 |
neurectodermal cell | 1.42e-13 | 44 |
neural cell | 7.41e-13 | 43 |
neuron | 8.66e-11 | 33 |
neuronal stem cell | 8.66e-11 | 33 |
neuroblast | 8.66e-11 | 33 |
electrically signaling cell | 8.66e-11 | 33 |
electrically responsive cell | 3.55e-08 | 39 |
electrically active cell | 3.55e-08 | 39 |