FFCP PHASE1:Mm9::chr11:115560741..115560752,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|EntrezGene=14784|HGNC=|MCL_coexpression_id=13|UniProt=Q3U5I5|association_with_transcript=53bp_to_uc007mij.1_5end|description=CAGE_peak_6_at_Grb2_5end|id=chr11:115560741..115560752,-|ontology_enrichment_celltype=CL:0000117!7.95e-14!23;CL:0000337!7.95e-14!23;CL:0000540!4.34e-10!33;CL:0000047!4.34e-10!33;CL:0000031!4.34e-10!33;CL:0000404!4.34e-10!33;CL:0002319!7.05e-10!43;CL:0000221!2.38e-09!44;CL:0000133!2.38e-09!44;CL:0000393!7.04e-09!39;CL:0000211!7.04e-09!39;CL:0000055!1.63e-08!50|ontology_enrichment_celltype_v019_2=CL:0000117,7.37e-27,23;CL:0000337,7.37e-27,23;CL:0000540,5.48e-20,33;CL:0000047,5.48e-20,33;CL:0000031,5.48e-20,33;CL:0000404,5.48e-20,33;CL:0002319,3.00e-18,43;CL:0000221,9.81e-18,44;CL:0000133,9.81e-18,44;CL:0000393,2.64e-16,39;CL:0000211,2.64e-16,39;CL:0002321,1.52e-09,70;CL:0002613,2.14e-09,3;CL:0000120,3.75e-09,3;CL:0002612,3.99e-09,3;CL:0002609,7.53e-07,6|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!2.10e-22!73;UBERON:0005743!2.10e-22!73;UBERON:0001049!9.26e-22!52;UBERON:0005068!9.26e-22!52;UBERON:0006241!9.26e-22!52;UBERON:0007135!9.26e-22!52;UBERON:0002346!9.84e-22!71;UBERON:0003075!9.84e-22!71;UBERON:0007284!9.84e-22!71;UBERON:0000073!1.30e-21!75;UBERON:0001016!1.30e-21!75;UBERON:0002020!3.04e-20!34;UBERON:0003056!9.29e-20!49;UBERON:0000955!2.09e-19!50;UBERON:0006238!2.09e-19!50;UBERON:0000033!2.67e-19!63;UBERON:0002616!1.18e-18!49;UBERON:0004121!1.71e-18!102;UBERON:0000924!1.71e-18!102;UBERON:0006601!1.71e-18!102;UBERON:0003080!8.27e-18!40;UBERON:0002780!3.46e-17!39;UBERON:0001890!3.46e-17!39;UBERON:0006240!3.46e-17!39;UBERON:0002791!2.46e-16!29;UBERON:0003528!2.46e-16!29;UBERON:0001893!2.46e-16!29;UBERON:0000956!3.27e-11!21;UBERON:0001869!3.27e-11!21;UBERON:0000203!3.27e-11!21;UBERON:0000025!1.00e-09!114;UBERON:0007811!1.47e-09!86;UBERON:0002619!1.68e-09!17;UBERON:0000153!7.64e-09!94;UBERON:0004111!7.33e-08!122|ontology_enrichment_uberon_v019_2=UBERON:0002020,1.06e-36,34;UBERON:0001017,4.55e-27,73;UBERON:0001016,3.51e-26,75;UBERON:0003528,1.59e-25,29;UBERON:0002791,1.59e-25,29;UBERON:0001893,1.59e-25,29;UBERON:0001049,2.98e-24,52;UBERON:0005068,2.98e-24,52;UBERON:0006241,2.98e-24,52;UBERON:0007135,2.98e-24,52;UBERON:0000073,3.73e-23,54;UBERON:0003080,2.11e-19,40;UBERON:0004121,2.34e-19,95;UBERON:0000924,2.34e-19,95;UBERON:0006601,2.34e-19,95;UBERON:0002346,1.07e-18,64;UBERON:0003075,1.07e-18,64;UBERON:0007284,1.07e-18,64;UBERON:0000956,4.55e-18,21;UBERON:0001869,4.55e-18,21;UBERON:0000203,4.55e-18,21;UBERON:0002780,6.42e-18,39;UBERON:0001890,6.42e-18,39;UBERON:0006240,6.42e-18,39;UBERON:0000955,6.67e-18,47;UBERON:0006238,6.67e-18,47;UBERON:0002619,1.78e-16,17;UBERON:0002616,2.62e-16,46;UBERON:0010371,9.99e-16,73;UBERON:0003056,4.80e-15,49;UBERON:0001948,7.24e-14,5;UBERON:0002315,7.24e-14,5;UBERON:0002240,1.71e-11,6;UBERON:0005174,1.71e-11,6;UBERON:0001137,1.71e-11,6;UBERON:0010314,2.26e-11,92;UBERON:0000369,1.53e-09,5;UBERON:0002435,1.53e-09,5;UBERON:0000204,1.53e-09,5;UBERON:0010082,1.53e-09,5;UBERON:0002257,3.99e-09,3;UBERON:0002021,5.14e-09,10;UBERON:0000411,5.14e-09,10;UBERON:0001950,5.14e-09,10;UBERON:0001954,5.43e-09,7;UBERON:0003022,5.43e-09,7;UBERON:0002421,5.43e-09,7;UBERON:0000349,5.43e-09,7;UBERON:0002600,5.43e-09,7;UBERON:0002420,1.60e-08,8;UBERON:0007245,1.60e-08,8;UBERON:0010009,1.60e-08,8;UBERON:0010011,1.60e-08,8;UBERON:0000454,1.60e-08,8;UBERON:0000025,3.72e-08,114;UBERON:0004111,2.81e-07,122|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0.140788722151667,0,0,0,0,0,0,0,0,0,0,0,0.425216450755349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.683045484958446,0,0.377690453926732,0.202753862439029,0.367093504323363,0,0.218025156380447,1.09843091367236,0.194429899074283,0,1.43752564364972,0,0,0,0,0,0,2.42779753031517,2.11596391708813,1.90149421051854,0,0,0,0,0,0.299600110518405,0.384218305321555,1.34796496001021,1.21505344498522,0.210324961351382,1.42825492201902,2.65042249141936,1.46988959057945,1.82106394934649,0.919218786610021,0,0.383062014255563,0.46081959976873,1.84640802822271,3.11057988248193,3.12548022334056,1.11673199600552,0.56276261003168,0.763991238884051,2.06240009831567,1.85083185038834,2.98239113320481,0,0.0755715601067855,0,0,0,0,0,0,0.280888840263504,0,0,0,0,0,0,0,0,0,0,0,0.258937883647172,0,0.173485326766136,0,0.461230994512117,0.452167921657868,0.23517741427141,0,0,0,0,0.323533699894818,0,0,0,0.878342391034642,0.628340120440365,0,0,0,0,1.04853447583376,0.457500602818626,2.1361239859187,0.695297280769106,2.04572365864264,0.20778804455956,0.811206315338788,0,0,0.252722758433675,0.210441855886474,0.260240885925407,0.689706313300419,0.720248519221397,0.452114453507145,0.408218994907967,0.384341160854549,0.562210347358373,0,0.215567992932842,0,0,0,0.278047249225598,0,0.205782136407943,0.199034266818493,0,0,0,0.414251545071004,0,0.180062061461015,0.23674473558521,0.196764231747404,0.308534225774757,0.232533944750408,0.536546802799238,0.233530684734339,0.329119699826961,0.32833492815819,0.405344047729279,0.438599962275997,0.219550115291051,0.134206418760372,1.89260953707715,1.74937841044784,0,0,0,0.232236671860439,0.128867461322093,0.201683524623343,0,0,0,0,0,0,0.19496408711912,0,0,0,0.189667900953082,0.342745537829186,1.1270773567308,0,0,0.210407459670956,0.0632365371242573,0,0,0,0,0,0.393117990226406,0.224862112384854,0,0.241177159752417,0.25462585178142,0,0,0,0,0,0.624075346229121,0,0,0,0,0.189491411770485,0,0,0,0.167506257441816,0,0,0.157635144106191,0,0,0,0,0,0,0.54390568381871,0,0,0.481651769963376,0.35163505977661,0,0.252470927204373,0,0,0.646270193198397,0,0.445597348164788,0,0,1.46127928955656,0,1.92792789853084,0,0.534196811001766,0,0.164970122972535,0,0.485561272309963,0,0.188605079755898,0,0,0,0,0,0,0,0,0,0.36012218806262,0.258717367565509,0.428674070063185,0.532020700926821,0.356737635204141,0.164549020602121,0.304464949114599,0.938686832254841,1.0591603543191,0,0.16488625294148,0,0.120625849856312,0,0,0,0,0,0,0,0,0,0,0.169978429993855,0,0,0,0,0,0.108005340821801,0,0,0.404593039154462,0.165306911450672,0,0.129614973291793,0,0,0,0,0.194451188344048,0.129159823477731,0,0.117357238645754,0,0.209718688851422,0,0.288030006257865,0,0,0,0,0,0,0,0,0,0,0,0,0.0962118416403295,0.233753804363138,0,0,0,0.503653849092235,0,0.187682475451182,0,0,0,1.12950368523413,0.460325236507177,2.29158205375759,1.71853182343688,1.37016503954128,3.0215755895588,0.675022500231806,1.80128481289688,0,0.51776031175182,0.103787347584177,0,0.341467211508268,0,0.419226325255965,0.735374033800057,0.222246727801615,1.03017528619447,0.320919209591815,0,0.50695859978048,0.565879024158229,0.37456602987953,0.512201219238954,0.287177344778066,0,0.115884325944855,0.578727661391115,0,0.883193520806384,0.342869252385415,0.177475806159338,0.953744759789284,0.145346416632329,0.470546902076653,0.676916863133412,0.365855945745545,0.263069711437843,0.271608227691724,0,0,0.394017929502254,0.409231043169689,0.309873682371932,0.192906610981141,1.24905288968973,0.233931608445408,0.429742108096597,0.382576664137687,0.661774257358546,0.231867835620421|short_description=p6@Grb2}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:14784 | |||
|HGNC= | |||
|MCL_coexpression_id=13 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:Q3U5I5 | |||
|association_with_transcript=53bp_to_uc007mij.1_5end | |||
|cluster_id=chr11:115560741..115560752,- | |||
|description=CAGE_peak_6_at_Grb2_5end | |||
|id=chr11:115560741..115560752,- | |||
|ontology_enrichment_celltype=CL:0000117!7.95e-14!23;CL:0000337!7.95e-14!23;CL:0000540!4.34e-10!33;CL:0000047!4.34e-10!33;CL:0000031!4.34e-10!33;CL:0000404!4.34e-10!33;CL:0002319!7.05e-10!43;CL:0000221!2.38e-09!44;CL:0000133!2.38e-09!44;CL:0000393!7.04e-09!39;CL:0000211!7.04e-09!39;CL:0000055!1.63e-08!50 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,7.37e-27,23;CL:0000337,7.37e-27,23;CL:0000540,5.48e-20,33;CL:0000047,5.48e-20,33;CL:0000031,5.48e-20,33;CL:0000404,5.48e-20,33;CL:0002319,3.00e-18,43;CL:0000221,9.81e-18,44;CL:0000133,9.81e-18,44;CL:0000393,2.64e-16,39;CL:0000211,2.64e-16,39;CL:0002321,1.52e-09,70;CL:0002613,2.14e-09,3;CL:0000120,3.75e-09,3;CL:0002612,3.99e-09,3;CL:0002609,7.53e-07,6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!2.10e-22!73;UBERON:0005743!2.10e-22!73;UBERON:0001049!9.26e-22!52;UBERON:0005068!9.26e-22!52;UBERON:0006241!9.26e-22!52;UBERON:0007135!9.26e-22!52;UBERON:0002346!9.84e-22!71;UBERON:0003075!9.84e-22!71;UBERON:0007284!9.84e-22!71;UBERON:0000073!1.30e-21!75;UBERON:0001016!1.30e-21!75;UBERON:0002020!3.04e-20!34;UBERON:0003056!9.29e-20!49;UBERON:0000955!2.09e-19!50;UBERON:0006238!2.09e-19!50;UBERON:0000033!2.67e-19!63;UBERON:0002616!1.18e-18!49;UBERON:0004121!1.71e-18!102;UBERON:0000924!1.71e-18!102;UBERON:0006601!1.71e-18!102;UBERON:0003080!8.27e-18!40;UBERON:0002780!3.46e-17!39;UBERON:0001890!3.46e-17!39;UBERON:0006240!3.46e-17!39;UBERON:0002791!2.46e-16!29;UBERON:0003528!2.46e-16!29;UBERON:0001893!2.46e-16!29;UBERON:0000956!3.27e-11!21;UBERON:0001869!3.27e-11!21;UBERON:0000203!3.27e-11!21;UBERON:0000025!1.00e-09!114;UBERON:0007811!1.47e-09!86;UBERON:0002619!1.68e-09!17;UBERON:0000153!7.64e-09!94;UBERON:0004111!7.33e-08!122 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002020,1.06e-36,34;UBERON:0001017,4.55e-27,73;UBERON:0001016,3.51e-26,75;UBERON:0003528,1.59e-25,29;UBERON:0002791,1.59e-25,29;UBERON:0001893,1.59e-25,29;UBERON:0001049,2.98e-24,52;UBERON:0005068,2.98e-24,52;UBERON:0006241,2.98e-24,52;UBERON:0007135,2.98e-24,52;UBERON:0000073,3.73e-23,54;UBERON:0003080,2.11e-19,40;UBERON:0004121,2.34e-19,95;UBERON:0000924,2.34e-19,95;UBERON:0006601,2.34e-19,95;UBERON:0002346,1.07e-18,64;UBERON:0003075,1.07e-18,64;UBERON:0007284,1.07e-18,64;UBERON:0000956,4.55e-18,21;UBERON:0001869,4.55e-18,21;UBERON:0000203,4.55e-18,21;UBERON:0002780,6.42e-18,39;UBERON:0001890,6.42e-18,39;UBERON:0006240,6.42e-18,39;UBERON:0000955,6.67e-18,47;UBERON:0006238,6.67e-18,47;UBERON:0002619,1.78e-16,17;UBERON:0002616,2.62e-16,46;UBERON:0010371,9.99e-16,73;UBERON:0003056,4.80e-15,49;UBERON:0001948,7.24e-14,5;UBERON:0002315,7.24e-14,5;UBERON:0002240,1.71e-11,6;UBERON:0005174,1.71e-11,6;UBERON:0001137,1.71e-11,6;UBERON:0010314,2.26e-11,92;UBERON:0000369,1.53e-09,5;UBERON:0002435,1.53e-09,5;UBERON:0000204,1.53e-09,5;UBERON:0010082,1.53e-09,5;UBERON:0002257,3.99e-09,3;UBERON:0002021,5.14e-09,10;UBERON:0000411,5.14e-09,10;UBERON:0001950,5.14e-09,10;UBERON:0001954,5.43e-09,7;UBERON:0003022,5.43e-09,7;UBERON:0002421,5.43e-09,7;UBERON:0000349,5.43e-09,7;UBERON:0002600,5.43e-09,7;UBERON:0002420,1.60e-08,8;UBERON:0007245,1.60e-08,8;UBERON:0010009,1.60e-08,8;UBERON:0010011,1.60e-08,8;UBERON:0000454,1.60e-08,8;UBERON:0000025,3.72e-08,114;UBERON:0004111,2.81e-07,122 | |||
|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0.140788722151667,0,0,0,0,0,0,0,0,0,0,0,0.425216450755349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.683045484958446,0,0.377690453926732,0.202753862439029,0.367093504323363,0,0.218025156380447,1.09843091367236,0.194429899074283,0,1.43752564364972,0,0,0,0,0,0,2.42779753031517,2.11596391708813,1.90149421051854,0,0,0,0,0,0.299600110518405,0.384218305321555,1.34796496001021,1.21505344498522,0.210324961351382,1.42825492201902,2.65042249141936,1.46988959057945,1.82106394934649,0.919218786610021,0,0.383062014255563,0.46081959976873,1.84640802822271,3.11057988248193,3.12548022334056,1.11673199600552,0.56276261003168,0.763991238884051,2.06240009831567,1.85083185038834,2.98239113320481,0,0.0755715601067855,0,0,0,0,0,0,0.280888840263504,0,0,0,0,0,0,0,0,0,0,0,0.258937883647172,0,0.173485326766136,0,0.461230994512117,0.452167921657868,0.23517741427141,0,0,0,0,0.323533699894818,0,0,0,0.878342391034642,0.628340120440365,0,0,0,0,1.04853447583376,0.457500602818626,2.1361239859187,0.695297280769106,2.04572365864264,0.20778804455956,0.811206315338788,0,0,0.252722758433675,0.210441855886474,0.260240885925407,0.689706313300419,0.720248519221397,0.452114453507145,0.408218994907967,0.384341160854549,0.562210347358373,0,0.215567992932842,0,0,0,0.278047249225598,0,0.205782136407943,0.199034266818493,0,0,0,0.414251545071004,0,0.180062061461015,0.23674473558521,0.196764231747404,0.308534225774757,0.232533944750408,0.536546802799238,0.233530684734339,0.329119699826961,0.32833492815819,0.405344047729279,0.438599962275997,0.219550115291051,0.134206418760372,1.89260953707715,1.74937841044784,0,0,0,0.232236671860439,0.128867461322093,0.201683524623343,0,0,0,0,0,0,0.19496408711912,0,0,0,0.189667900953082,0.342745537829186,1.1270773567308,0,0,0.210407459670956,0.0632365371242573,0,0,0,0,0,0.393117990226406,0.224862112384854,0,0.241177159752417,0.25462585178142,0,0,0,0,0,0.624075346229121,0,0,0,0,0.189491411770485,0,0,0,0.167506257441816,0,0,0.157635144106191,0,0,0,0,0,0,0.54390568381871,0,0,0.481651769963376,0.35163505977661,0,0.252470927204373,0,0,0.646270193198397,0,0.445597348164788,0,0,1.46127928955656,0,1.92792789853084,0,0.534196811001766,0,0.164970122972535,0,0.485561272309963,0,0.188605079755898,0,0,0,0,0,0,0,0,0,0.36012218806262,0.258717367565509,0.428674070063185,0.532020700926821,0.356737635204141,0.164549020602121,0.304464949114599,0.938686832254841,1.0591603543191,0,0.16488625294148,0,0.120625849856312,0,0,0,0,0,0,0,0,0,0,0.169978429993855,0,0,0,0,0,0.108005340821801,0,0,0.404593039154462,0.165306911450672,0,0.129614973291793,0,0,0,0,0.194451188344048,0.129159823477731,0,0.117357238645754,0,0.209718688851422,0,0.288030006257865,0,0,0,0,0,0,0,0,0,0,0,0,0.0962118416403295,0.233753804363138,0,0,0,0.503653849092235,0,0.187682475451182,0,0,0,1.12950368523413,0.460325236507177,2.29158205375759,1.71853182343688,1.37016503954128,3.0215755895588,0.675022500231806,1.80128481289688,0,0.51776031175182,0.103787347584177,0,0.341467211508268,0,0.419226325255965,0.735374033800057,0.222246727801615,1.03017528619447,0.320919209591815,0,0.50695859978048,0.565879024158229,0.37456602987953,0.512201219238954,0.287177344778066,0,0.115884325944855,0.578727661391115,0,0.883193520806384,0.342869252385415,0.177475806159338,0.953744759789284,0.145346416632329,0.470546902076653,0.676916863133412,0.365855945745545,0.263069711437843,0.271608227691724,0,0,0.394017929502254,0.409231043169689,0.309873682371932,0.192906610981141,1.24905288968973,0.233931608445408,0.429742108096597,0.382576664137687,0.661774257358546,0.231867835620421 | |||
|short_description=p6@Grb2 | |||
}} |
Revision as of 11:07, 5 August 2015
Short description: | p6@Grb2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_6_at_Grb2_5end |
Coexpression cluster: | MCL_coexpression_mm9:13 |
Association with transcript: | 53bp_to_uc007mij.1_5end |
EntrezGene: | 14784 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 7.37e-27 | 23 |
neuroblast (sensu Vertebrata) | 7.37e-27 | 23 |
neuron | 5.48e-20 | 33 |
neuronal stem cell | 5.48e-20 | 33 |
neuroblast | 5.48e-20 | 33 |
electrically signaling cell | 5.48e-20 | 33 |
neural cell | 3.00e-18 | 43 |
ectodermal cell | 9.81e-18 | 44 |
neurectodermal cell | 9.81e-18 | 44 |
electrically responsive cell | 2.64e-16 | 39 |
electrically active cell | 2.64e-16 | 39 |
embryonic cell | 1.52e-09 | 70 |
striatum neuron | 2.14e-09 | 3 |
granule cell | 3.75e-09 | 3 |
neuron of the ventral spinal cord | 3.99e-09 | 3 |
neuron of cerebral cortex | 7.53e-07 | 6 |