FFCP PHASE1:Mm9::chr5:117690458..117690473,+: Difference between revisions
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{{FFCP|EntrezGene=330177|HGNC=|MCL_coexpression_id=1|UniProt=Q3V3K3|association_with_transcript=-202bp_to_ENSMUST00000111975_5end|description=CAGE_peak_4_at_Taok3_5end|id=chr5:117690458..117690473,+|ontology_enrichment_celltype=CL:0000117!1.14e-12!23;CL:0000337!1.14e-12!23;CL:0000221!3.40e-09!44;CL:0000133!3.40e-09!44;CL:0000393!4.89e-09!39;CL:0000211!4.89e-09!39;CL:0000540!4.97e-09!33;CL:0000047!4.97e-09!33;CL:0000031!4.97e-09!33;CL:0000404!4.97e-09!33;CL:0002319!5.81e-09!43;CL:0000055!1.51e-08!50|ontology_enrichment_celltype_v019_2=CL:0000117,3.85e-18,23;CL:0000337,3.85e-18,23;CL:0000540,3.22e-11,33;CL:0000047,3.22e-11,33;CL:0000031,3.22e-11,33;CL:0000404,3.22e-11,33;CL:0000221,1.14e-10,44;CL:0000133,1.14e-10,44;CL:0002319,2.53e-10,43;CL:0000393,4.89e-10,39;CL:0000211,4.89e-10,39|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!1.17e-27!73;UBERON:0005743!1.17e-27!73;UBERON:0001049!6.68e-27!52;UBERON:0005068!6.68e-27!52;UBERON:0006241!6.68e-27!52;UBERON:0007135!6.68e-27!52;UBERON:0000073!1.87e-26!75;UBERON:0001016!1.87e-26!75;UBERON:0000955!8.64e-26!50;UBERON:0006238!8.64e-26!50;UBERON:0000033!1.94e-25!63;UBERON:0002616!5.16e-25!49;UBERON:0002346!5.34e-25!71;UBERON:0003075!5.34e-25!71;UBERON:0007284!5.34e-25!71;UBERON:0004121!4.20e-23!102;UBERON:0000924!4.20e-23!102;UBERON:0006601!4.20e-23!102;UBERON:0003056!1.52e-22!49;UBERON:0003080!7.75e-22!40;UBERON:0002780!2.83e-21!39;UBERON:0001890!2.83e-21!39;UBERON:0006240!2.83e-21!39;UBERON:0002020!1.27e-20!34;UBERON:0002791!1.07e-17!29;UBERON:0003528!1.07e-17!29;UBERON:0001893!1.07e-17!29;UBERON:0007811!1.42e-15!86;UBERON:0000153!1.02e-14!94;UBERON:0000956!1.97e-13!21;UBERON:0001869!1.97e-13!21;UBERON:0000203!1.97e-13!21;UBERON:0002619!2.91e-11!17;UBERON:0004111!1.06e-08!122;UBERON:0000025!1.83e-08!114;UBERON:0002021!8.72e-08!10;UBERON:0000411!8.72e-08!10;UBERON:0001950!8.72e-08!10|ontology_enrichment_uberon_v019_2=UBERON:0000073,1.79e-41,54;UBERON:0001049,1.89e-39,52;UBERON:0005068,1.89e-39,52;UBERON:0006241,1.89e-39,52;UBERON:0007135,1.89e-39,52;UBERON:0001017,1.67e-36,73;UBERON:0002346,3.19e-35,64;UBERON:0003075,3.19e-35,64;UBERON:0007284,3.19e-35,64;UBERON:0001016,5.67e-35,75;UBERON:0000955,1.17e-34,47;UBERON:0006238,1.17e-34,47;UBERON:0002616,1.81e-33,46;UBERON:0003080,1.09e-31,40;UBERON:0002020,1.15e-31,34;UBERON:0002780,8.40e-31,39;UBERON:0001890,8.40e-31,39;UBERON:0006240,8.40e-31,39;UBERON:0003056,7.28e-30,49;UBERON:0010371,1.28e-29,73;UBERON:0004121,2.14e-29,95;UBERON:0000924,2.14e-29,95;UBERON:0006601,2.14e-29,95;UBERON:0003528,4.89e-27,29;UBERON:0002791,4.89e-27,29;UBERON:0001893,4.89e-27,29;UBERON:0000956,2.74e-20,21;UBERON:0001869,2.74e-20,21;UBERON:0000203,2.74e-20,21;UBERON:0010314,1.32e-19,92;UBERON:0002619,7.35e-17,17;UBERON:0002021,2.20e-11,10;UBERON:0000411,2.20e-11,10;UBERON:0001950,2.20e-11,10;UBERON:0000025,1.34e-10,114;UBERON:0004111,5.62e-10,122;UBERON:0003076,6.17e-08,12;UBERON:0003057,6.17e-08,12;UBERON:0002420,8.42e-08,8;UBERON:0007245,8.42e-08,8;UBERON:0010009,8.42e-08,8;UBERON:0010011,8.42e-08,8;UBERON:0000454,8.42e-08,8;UBERON:0001954,6.06e-07,7;UBERON:0003022,6.06e-07,7;UBERON:0002421,6.06e-07,7;UBERON:0000349,6.06e-07,7;UBERON:0002600,6.06e-07,7|phase1_expression=0.80074423552397,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.44573593256819,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.39203954153597,1.01376931219515,0.734187008646726,0,0.65407546914134,1.75748946187577,1.94429899074283,1.25987779462826,2.87505128729943,0,0,0,0.771778308107841,0.573066879877513,0,4.04632921719196,6.87688273053643,0.633831403506179,1.69422266034566,0,0,0,0,0.898800331555214,0.384218305321555,3.21437798156281,4.72520784160917,3.57552434297349,4.28476476605705,5.07997644188711,4.28717797252339,4.79227355091182,1.83843757322004,6.60695285996332,5.10749352340751,3.07213066512487,5.27545150920775,4.84884511092771,1.56274011167028,3.07101298901519,3.93933827022176,4.88954392885792,4.12480019663135,4.27115042397309,5.40558392893372,0.151452386666368,0.151143120213571,0.289864488701678,0,0,0,0,0,0,0.681721290312231,1.03914401841148,1.06001872353102,1.12674735821344,2.56652954828636,0,0,0,0,0,0.22836775943812,0.517875767294343,0.890652834388949,0.346970653532272,0.304465478312141,0.461230994512117,0.301445281105245,0.352766121407114,0.251333182659351,0,0.86759614151947,0,0.485300549842228,0.220841518460394,0,1.86391761218122,6.14839673724249,6.0739544975902,0,0,0,0,4.19413790333504,2.74500361691176,9.04711335212624,7.12679712788333,7.92717917724025,4.36354893575076,5.51620294430376,0.712875546952214,0.622034853050465,0.252722758433675,1.05220927943237,0.650602214813519,0.229902104433473,0.720248519221397,0.753524089178575,1.02054748726992,1.5373646434182,1.68663104207512,1.29351685369508,0,0.189106080167819,0.175951124163949,0.219195732427575,0.834141747676794,1.0447564995665,0.823128545631774,0.199034266818493,0,0,0,0.207125772535502,0,0.540186184383045,0.23674473558521,0.590292695242212,0,0,0.268273401399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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:330177 | |||
|HGNC= | |||
|MCL_coexpression_id=1 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:Q3V3K3 | |||
|association_with_transcript=-202bp_to_ENSMUST00000111975_5end | |||
|cluster_id=chr5:117690458..117690473,+ | |||
|description=CAGE_peak_4_at_Taok3_5end | |||
|id=chr5:117690458..117690473,+ | |||
|ontology_enrichment_celltype=CL:0000117!1.14e-12!23;CL:0000337!1.14e-12!23;CL:0000221!3.40e-09!44;CL:0000133!3.40e-09!44;CL:0000393!4.89e-09!39;CL:0000211!4.89e-09!39;CL:0000540!4.97e-09!33;CL:0000047!4.97e-09!33;CL:0000031!4.97e-09!33;CL:0000404!4.97e-09!33;CL:0002319!5.81e-09!43;CL:0000055!1.51e-08!50 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,3.85e-18,23;CL:0000337,3.85e-18,23;CL:0000540,3.22e-11,33;CL:0000047,3.22e-11,33;CL:0000031,3.22e-11,33;CL:0000404,3.22e-11,33;CL:0000221,1.14e-10,44;CL:0000133,1.14e-10,44;CL:0002319,2.53e-10,43;CL:0000393,4.89e-10,39;CL:0000211,4.89e-10,39 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!1.17e-27!73;UBERON:0005743!1.17e-27!73;UBERON:0001049!6.68e-27!52;UBERON:0005068!6.68e-27!52;UBERON:0006241!6.68e-27!52;UBERON:0007135!6.68e-27!52;UBERON:0000073!1.87e-26!75;UBERON:0001016!1.87e-26!75;UBERON:0000955!8.64e-26!50;UBERON:0006238!8.64e-26!50;UBERON:0000033!1.94e-25!63;UBERON:0002616!5.16e-25!49;UBERON:0002346!5.34e-25!71;UBERON:0003075!5.34e-25!71;UBERON:0007284!5.34e-25!71;UBERON:0004121!4.20e-23!102;UBERON:0000924!4.20e-23!102;UBERON:0006601!4.20e-23!102;UBERON:0003056!1.52e-22!49;UBERON:0003080!7.75e-22!40;UBERON:0002780!2.83e-21!39;UBERON:0001890!2.83e-21!39;UBERON:0006240!2.83e-21!39;UBERON:0002020!1.27e-20!34;UBERON:0002791!1.07e-17!29;UBERON:0003528!1.07e-17!29;UBERON:0001893!1.07e-17!29;UBERON:0007811!1.42e-15!86;UBERON:0000153!1.02e-14!94;UBERON:0000956!1.97e-13!21;UBERON:0001869!1.97e-13!21;UBERON:0000203!1.97e-13!21;UBERON:0002619!2.91e-11!17;UBERON:0004111!1.06e-08!122;UBERON:0000025!1.83e-08!114;UBERON:0002021!8.72e-08!10;UBERON:0000411!8.72e-08!10;UBERON:0001950!8.72e-08!10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,1.79e-41,54;UBERON:0001049,1.89e-39,52;UBERON:0005068,1.89e-39,52;UBERON:0006241,1.89e-39,52;UBERON:0007135,1.89e-39,52;UBERON:0001017,1.67e-36,73;UBERON:0002346,3.19e-35,64;UBERON:0003075,3.19e-35,64;UBERON:0007284,3.19e-35,64;UBERON:0001016,5.67e-35,75;UBERON:0000955,1.17e-34,47;UBERON:0006238,1.17e-34,47;UBERON:0002616,1.81e-33,46;UBERON:0003080,1.09e-31,40;UBERON:0002020,1.15e-31,34;UBERON:0002780,8.40e-31,39;UBERON:0001890,8.40e-31,39;UBERON:0006240,8.40e-31,39;UBERON:0003056,7.28e-30,49;UBERON:0010371,1.28e-29,73;UBERON:0004121,2.14e-29,95;UBERON:0000924,2.14e-29,95;UBERON:0006601,2.14e-29,95;UBERON:0003528,4.89e-27,29;UBERON:0002791,4.89e-27,29;UBERON:0001893,4.89e-27,29;UBERON:0000956,2.74e-20,21;UBERON:0001869,2.74e-20,21;UBERON:0000203,2.74e-20,21;UBERON:0010314,1.32e-19,92;UBERON:0002619,7.35e-17,17;UBERON:0002021,2.20e-11,10;UBERON:0000411,2.20e-11,10;UBERON:0001950,2.20e-11,10;UBERON:0000025,1.34e-10,114;UBERON:0004111,5.62e-10,122;UBERON:0003076,6.17e-08,12;UBERON:0003057,6.17e-08,12;UBERON:0002420,8.42e-08,8;UBERON:0007245,8.42e-08,8;UBERON:0010009,8.42e-08,8;UBERON:0010011,8.42e-08,8;UBERON:0000454,8.42e-08,8;UBERON:0001954,6.06e-07,7;UBERON:0003022,6.06e-07,7;UBERON:0002421,6.06e-07,7;UBERON:0000349,6.06e-07,7;UBERON:0002600,6.06e-07,7 | |||
|phase1_expression=0.80074423552397,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.44573593256819,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.39203954153597,1.01376931219515,0.734187008646726,0,0.65407546914134,1.75748946187577,1.94429899074283,1.25987779462826,2.87505128729943,0,0,0,0.771778308107841,0.573066879877513,0,4.04632921719196,6.87688273053643,0.633831403506179,1.69422266034566,0,0,0,0,0.898800331555214,0.384218305321555,3.21437798156281,4.72520784160917,3.57552434297349,4.28476476605705,5.07997644188711,4.28717797252339,4.79227355091182,1.83843757322004,6.60695285996332,5.10749352340751,3.07213066512487,5.27545150920775,4.84884511092771,1.56274011167028,3.07101298901519,3.93933827022176,4.88954392885792,4.12480019663135,4.27115042397309,5.40558392893372,0.151452386666368,0.151143120213571,0.289864488701678,0,0,0,0,0,0,0.681721290312231,1.03914401841148,1.06001872353102,1.12674735821344,2.56652954828636,0,0,0,0,0,0.22836775943812,0.517875767294343,0.890652834388949,0.346970653532272,0.304465478312141,0.461230994512117,0.301445281105245,0.352766121407114,0.251333182659351,0,0.86759614151947,0,0.485300549842228,0.220841518460394,0,1.86391761218122,6.14839673724249,6.0739544975902,0,0,0,0,4.19413790333504,2.74500361691176,9.04711335212624,7.12679712788333,7.92717917724025,4.36354893575076,5.51620294430376,0.712875546952214,0.622034853050465,0.252722758433675,1.05220927943237,0.650602214813519,0.229902104433473,0.720248519221397,0.753524089178575,1.02054748726992,1.5373646434182,1.68663104207512,1.29351685369508,0,0.189106080167819,0.175951124163949,0.219195732427575,0.834141747676794,1.0447564995665,0.823128545631774,0.199034266818493,0,0,0,0.207125772535502,0,0.540186184383045,0.23674473558521,0.590292695242212,0,0,0.268273401399619,0.116765342367169,0.329119699826961,0.32833492815819,0.56748166682099,0.438599962275997,0.658650345873152,0.268412837520744,5.46753866266731,10.496270462687,0,0.793351699990633,0.426576501070468,0.232236671860439,0.38660238396628,0.80673409849337,0.22237804384487,0,0,0.164698954724011,0.251335208800269,0.795825888164603,1.36474860983384,0,0,0.398282546508734,0,0.342745537829186,0,0.407302655690628,0.193952487167626,0.350679099451593,0.379419222745544,0.295220295959204,0.31399745568275,0,0,0,0.196558995113203,0.224862112384854,0,0.241177159752417,0,0,0,0,0,0.372140947668503,0,0.252578877947112,0,0,0.369506380333209,0.37898282354097,0,0.169745085775188,0.469380496577004,0.502518772325447,0.476087281772027,0,0.472905432318573,0.44292937929755,0.318909537314974,0.327726629431476,0.172684981865896,0.433947175744535,0,0,0,0.275936746304732,4.81651769963376,3.7507739709505,0.983609672260053,0.252470927204373,0.94652465824877,0,0.646270193198397,0,0,0.566153061577665,0,0.584511715822624,1.18586333383957,8.67567554338879,0.425820255624806,0.35613120733451,1.30309567482861,1.15479086080775,0,0.242780636154981,0,0.377210159511796,0,0,0.258428293168221,0.363533729477506,0.712994756769443,0.632073515871632,0,0,4.42571487479924,0.900305470156551,0.388076051348264,1.50035924522115,2.48276327099183,2.85390108163313,2.30368628842969,1.8267896946876,0.469343416127421,0.21183207086382,0.661585194164886,0.49465875882444,0.645857706783622,0.301564624640779,0.596861720015682,0,0.582961673259701,5.37733375830478,0,0.619160603889667,0.370389054739423,0,0.136694227721025,0.228778173206523,0,0,0,0,0.474503990371703,1.21991680276109,0.324016022465404,0.418176592028937,0.436725127492355,1.07891477107857,1.40510874733071,0.785267825952089,0.90730481304255,0,0.56369293868419,0.448549638131936,0.165458490457098,0.777804753376191,0.645799117388655,0.337912250981556,1.64300134104056,0.781226309063701,0.419437377702843,0.241584120826006,0,0,0.202725215290164,1.02710957164827,0.77952493786677,0.179026695667481,0.39736270956253,0.360586348559907,0.295379054349154,0.504832249740738,0.533447646584999,0.403304740547362,0.194915761479505,0,0.116876902181569,0.226730383615211,0,0,0,0.386379188064381,0,1.28206136987086,0.428736758158132,1.50471631210609,9.03602948187307,11.0478056761722,6.30185064783336,4.98374228796694,4.11049511862385,9.06472676867641,5.40018000185445,6.75481804836331,6.34399372577886,5.1776031175182,0.103787347584177,1.59609949360412,2.39027048055788,0.972426868273176,1.46729213839588,1.2869045591501,1.33348036680969,0.824140228955577,0.64183841918363,1.76888048234658,1.2673964994512,1.50901073108861,0.842773567228942,1.34452820050225,1.14870937911227,0,1.27472758539341,0.77163688185482,0.412085900803307,1.03039244094078,0.685738504770831,0.354951612318675,0.953744759789284,1.0174249164263,1.12931256498397,1.60767754994185,1.09756783723664,1.31534855718921,0.407412341537585,0,1.42362021749009,0.689531376628944,0.409231043169689,0.464810523557898,1.54325288784913,1.74867404556562,1.16965804222704,0.859484216193193,0.956441660344217,0.882365676478062,0 | |||
|short_description=p4@Taok3 | |||
}} |
Revision as of 03:39, 6 August 2015
Short description: | p4@Taok3 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_Taok3_5end |
Coexpression cluster: | MCL_coexpression_mm9:1 |
Association with transcript: | -202bp_to_ENSMUST00000111975_5end |
EntrezGene: | 330177 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 3.85e-18 | 23 |
neuroblast (sensu Vertebrata) | 3.85e-18 | 23 |
neuron | 3.22e-11 | 33 |
neuronal stem cell | 3.22e-11 | 33 |
neuroblast | 3.22e-11 | 33 |
electrically signaling cell | 3.22e-11 | 33 |
ectodermal cell | 1.14e-10 | 44 |
neurectodermal cell | 1.14e-10 | 44 |
neural cell | 2.53e-10 | 43 |
electrically responsive cell | 4.89e-10 | 39 |
electrically active cell | 4.89e-10 | 39 |