FFCP PHASE1:Hg19::chr3:147127142..147127168,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr3:147127142..147127168,+ to FFCP PHASE1:Hg19::chr3:147127142..147127168,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=7545 | |EntrezGene=7545 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=12872 | |HGNC=12872 | ||
|TSSclassifier=strong | |||
|UniProt=Q15915 | |UniProt=Q15915 | ||
|association_with_transcript=-2bp_to_ENST00000282928_5end | |||
|cluster_id=chr3:147127142..147127168,+ | |||
|coexpression_cluster_id=C11 | |||
|description=CAGE_peak_1_at_ZIC1_5end | |||
|id=chr3:147127142..147127168,+ | |||
|ontology_enrichment_celltype=CL:0002620!6.12e-12!23;CL:0002319!6.64e-11!25;CL:0000243!9.49e-10!15;CL:0000125!9.49e-10!15;CL:0000030!9.49e-10!15;CL:0000339!9.49e-10!15;CL:0000095!1.72e-09!17;CL:0000123!1.72e-09!17;CL:0000133!2.07e-08!59;CL:0000055!6.49e-08!180;CL:0000221!3.96e-07!71;CL:0000128!6.17e-07!7;CL:0000126!6.17e-07!7;CL:0000127!6.17e-07!7;CL:0002453!6.17e-07!7 | |||
|ontology_enrichment_celltype_v019=CL:0002319;4.23e-12;25!CL:0000243;8.89e-10;15!CL:0000125;8.89e-10;15!CL:0000095;1.00e-09;17!CL:0002620;1.04e-08;23!CL:0000128;1.89e-08;7!CL:0000126;1.89e-08;7!CL:0000127;1.89e-08;7!CL:0002559;1.81e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0002319,3.59e-12,25;CL:0000133,1.49e-10,59;CL:0000243,7.02e-10,15;CL:0000125,7.02e-10,15;CL:0000030,7.02e-10,15;CL:0000339,7.02e-10,15;CL:0000095,8.00e-10,17;CL:0000123,8.00e-10,17;CL:0000221,1.94e-09,72;CL:0002620,1.18e-08,23;CL:0000128,1.59e-08,7;CL:0000126,1.59e-08,7;CL:0000127,1.59e-08,7;CL:0002453,1.59e-08,7;CL:0002559,1.83e-07,5;CL:0000333,2.21e-07,41 | |||
|ontology_enrichment_development_v019=UBERON:0006601;1.46e-11;82!CL:0000339;8.89e-10;15 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!6.75e-57!82;UBERON:0000073!4.38e-56!94;UBERON:0001016!4.38e-56!94;UBERON:0005743!5.42e-56!86;UBERON:0000955!1.28e-50!69;UBERON:0006238!1.28e-50!69;UBERON:0002616!7.50e-45!59;UBERON:0001049!4.99e-43!57;UBERON:0005068!4.99e-43!57;UBERON:0006241!4.99e-43!57;UBERON:0007135!4.99e-43!57;UBERON:0004121!8.59e-39!169;UBERON:0000924!5.87e-38!173;UBERON:0006601!5.87e-38!173;UBERON:0003075!4.02e-37!86;UBERON:0007284!4.02e-37!86;UBERON:0002346!1.72e-35!90;UBERON:0000033!1.62e-34!123;UBERON:0000153!2.62e-33!129;UBERON:0007811!2.62e-33!129;UBERON:0002780!2.45e-29!41;UBERON:0001890!2.45e-29!41;UBERON:0006240!2.45e-29!41;UBERON:0003080!2.86e-28!42;UBERON:0003056!1.13e-26!61;UBERON:0002020!2.95e-24!34;UBERON:0003528!2.95e-24!34;UBERON:0001893!4.50e-24!34;UBERON:0002791!1.94e-23!33;UBERON:0001869!1.81e-22!32;UBERON:0000956!2.38e-17!25;UBERON:0000203!2.38e-17!25;UBERON:0000475!2.02e-16!365;UBERON:0003076!5.87e-16!15;UBERON:0003057!5.87e-16!15;UBERON:0002619!2.23e-15!22;UBERON:0002097!4.54e-14!40;UBERON:0004732!5.32e-14!13;UBERON:0001950!1.11e-13!20;UBERON:0004733!4.38e-13!12;UBERON:0002028!4.38e-13!12;UBERON:0007277!4.38e-13!12;UBERON:0002199!4.92e-13!45;UBERON:0002416!4.92e-13!45;UBERON:0007023!5.09e-13!115;UBERON:0000119!2.70e-11!312;UBERON:0002680!2.54e-10!9;UBERON:0001895!2.54e-10!9;UBERON:0010092!2.54e-10!9;UBERON:0000483!4.70e-10!309;UBERON:0002308!2.10e-08!9;UBERON:0000125!2.10e-08!9;UBERON:0002420!4.48e-08!9;UBERON:0007245!4.48e-08!9;UBERON:0010009!4.48e-08!9;UBERON:0010011!4.48e-08!9;UBERON:0000454!4.48e-08!9;UBERON:0002037!6.53e-08!6;UBERON:0006215!6.53e-08!6;UBERON:0002200!1.33e-07!11;UBERON:0006876!1.33e-07!11;UBERON:0002067!3.39e-07!9;UBERON:0004016!3.39e-07!9;UBERON:0010083!3.39e-07!9;UBERON:0000468!8.20e-07!659;UBERON:0009663!8.25e-07!7 | |||
|ontology_enrichment_uberon_v019=UBERON:0000073;3.92e-29;53!UBERON:0002616;3.92e-29;53!UBERON:0001017;1.26e-28;75!UBERON:0003528;1.52e-26;34!UBERON:0002020;1.52e-26;34!UBERON:0001893;1.89e-26;34!UBERON:0002791;3.32e-26;32!UBERON:0001869;5.38e-26;32!UBERON:0000955;8.26e-26;68!UBERON:0002780;9.30e-26;41!UBERON:0001890;9.30e-26;41!UBERON:0001016;1.24e-24;83!UBERON:0000956;4.28e-22;25!UBERON:0000203;4.28e-22;25!UBERON:0002619;1.30e-19;22!UBERON:0004732;1.15e-17;13!UBERON:0001950;2.07e-17;20!UBERON:0004733;1.73e-16;12!UBERON:0002028;1.73e-16;12!UBERON:0002680;6.53e-13;9!UBERON:0001895;6.53e-13;9!UBERON:0000125;2.03e-10;9!UBERON:0002308;2.03e-10;9!UBERON:0002420;6.24e-10;9!UBERON:0007245;6.24e-10;9!UBERON:0010009;6.24e-10;9!UBERON:0010011;6.24e-10;9!UBERON:0000454;6.24e-10;9!UBERON:0011216;7.60e-10;132!UBERON:0002037;8.66e-10;6!UBERON:0002097;8.78e-10;41!UBERON:0006876;1.01e-09;11!UBERON:0002298;2.21e-08;6!UBERON:0009663;2.33e-08;7!UBERON:0004121;3.50e-08;165!UBERON:0010314;1.28e-07;132!UBERON:0005284;1.57e-07;5!UBERON:0002073;1.81e-07;5!UBERON:0011135;3.17e-07;5!UBERON:0002216;3.17e-07;5!UBERON:0011134;3.17e-07;5!UBERON:0002209;3.17e-07;5!UBERON:0002213;3.17e-07;5!UBERON:0007844;3.17e-07;5!UBERON:0011138;3.17e-07;5!UBERON:0001130;3.17e-07;5!UBERON:0001066;3.17e-07;5!UBERON:0001468;3.17e-07;5!UBERON:0001894;9.99e-07;7 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,1.61e-71,89;UBERON:0001017,7.24e-71,81;UBERON:0000955,3.81e-62,68;UBERON:0006238,3.81e-62,68;UBERON:0001049,1.79e-55,56;UBERON:0005068,1.79e-55,56;UBERON:0006241,1.79e-55,56;UBERON:0007135,1.79e-55,56;UBERON:0000073,1.49e-51,53;UBERON:0002616,1.49e-51,53;UBERON:0003075,5.50e-48,82;UBERON:0007284,5.50e-48,82;UBERON:0004121,3.85e-47,171;UBERON:0000924,3.85e-47,171;UBERON:0006601,3.85e-47,171;UBERON:0010371,1.24e-46,104;UBERON:0002346,3.44e-46,86;UBERON:0002780,2.91e-36,41;UBERON:0001890,2.91e-36,41;UBERON:0003080,2.91e-36,41;UBERON:0006240,2.91e-36,41;UBERON:0003056,2.77e-35,61;UBERON:0010314,3.38e-33,132;UBERON:0003528,3.79e-31,34;UBERON:0002020,3.79e-31,34;UBERON:0001893,6.56e-31,34;UBERON:0002791,4.83e-29,32;UBERON:0001869,7.97e-29,32;UBERON:0000956,3.52e-22,25;UBERON:0000203,3.52e-22,25;UBERON:0011216,5.86e-21,223;UBERON:0003076,3.35e-20,15;UBERON:0003057,3.35e-20,15;UBERON:0002619,1.27e-19,22;UBERON:0004732,1.15e-17,13;UBERON:0001950,2.04e-17,20;UBERON:0007023,1.00e-16,114;UBERON:0004733,1.77e-16,12;UBERON:0002028,1.77e-16,12;UBERON:0007277,1.77e-16,12;UBERON:0002680,6.69e-13,9;UBERON:0001895,6.69e-13,9;UBERON:0010092,6.69e-13,9;UBERON:0000119,2.44e-12,309;UBERON:0002097,7.61e-12,41;UBERON:0000483,7.53e-11,306;UBERON:0000125,2.02e-10,9;UBERON:0002308,2.02e-10,9;UBERON:0002420,5.37e-10,9;UBERON:0007245,5.37e-10,9;UBERON:0010009,5.37e-10,9;UBERON:0010011,5.37e-10,9;UBERON:0000454,5.37e-10,9;UBERON:0002037,8.74e-10,6;UBERON:0006215,8.74e-10,6;UBERON:0002199,8.95e-10,46;UBERON:0002416,8.95e-10,46;UBERON:0006876,1.02e-09,11;UBERON:0002298,2.25e-08,6;UBERON:0009663,2.31e-08,7;UBERON:0005284,1.54e-07,5;UBERON:0002073,1.83e-07,5;UBERON:0005086,1.83e-07,5;UBERON:0011135,3.05e-07,5;UBERON:0002216,3.05e-07,5;UBERON:0011134,3.05e-07,5;UBERON:0002209,3.05e-07,5;UBERON:0002213,3.05e-07,5;UBERON:0005856,3.05e-07,5;UBERON:0005866,3.05e-07,5;UBERON:0005863,3.05e-07,5;UBERON:0007844,3.05e-07,5;UBERON:0011138,3.05e-07,5;UBERON:0001130,3.05e-07,5;UBERON:0001066,3.05e-07,5;UBERON:0001468,3.05e-07,5 | |||
|phase1_expression=0,0,0,0,0,0,0,0.631719873426831,0.522371256399677,0,0,0,0,11.0152054134441,8.94772914465373,0,0,0,0,57.7437762380135,46.1041562212012,54.2276668157092,4.86601178122796,5.74872585306114,4.89616294419731,0,0,0,0,0,1.23852898652861,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.21079900526674,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.722878304769133,0,0.579386075843295,0,0.486634870302636,41.2171802835336,26.3857982980451,28.6341401359591,0.982343066232845,0,0,0,0,0,0,0,0,0.198762407366705,0,0,0.56530794192401,1.25849830862972,0,0,0,0,0,0,0.760272105718513,0,0,0,0,0,0,0,0,0.183201743930407,0,0,0,0.496971951695318,0.379891534993739,0,0,0.354668382198357,2.24271040056923,0,0.24666754841716,0.622422070799533,0,0,93.6902477122125,74.9028701823999,0,0.624320153660641,0.570471821544449,0.149448680551801,3.28816596202542,7.12240955219779,9.83155646915739,0,0,0.413303124703062,0,0,0,0,0,0,0,0,0,0.150238058906597,0.113432183160021,5.38168907066586,2.13557388818567,3.81477422087211,5.10154863343484,3.19462840639161,6.44101350114073,4.83903826462134,0.168776332241266,0.0974370051611986,3.5340728394176,2.76149695926898,0,6.03516307278244,4.33234022378853,0.339121184620975,0,0,0,0.243947412259191,0.132529768321485,1.2781333715647,8.08556229119889,0.504641701751257,0,31.2899064659632,46.9565884880806,19.3388889893473,10.6804623447355,8.66255378003503,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.590789906681404,0,0,19.0440269431363,0,0,0,0,0,0,11.5465073620219,25.9684107144172,3.99189560401794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,102.71207326035,78.0368523211571,129.808765903082,0,0,0.845302752556,0,0,0,0,0,0,0,0,0.65147236858747,0,0,0,0,0,0,0,0,0.479249710983165,1.14861935834114,22.8219048065149,2.02693829334611,2.87666851570537,5.19276793395697,0,0,0,0,42.9419914935963,5.20559415430487,9.27946575333234,5.36052049069916,8.93114252314428,0,0,0,19.6306386750624,27.5093786582822,9.76554085319048,0,0,0,0,0,0,5.17365356462525,0,0.921845842708516,0.955719759148911,150.571090088847,127.306210233828,0,0,0,0.303127571446259,0,0.604780586659361,0,0.153461973288062,0,0,0,0,0,0,0,1.23190734020714,0,1.04589340613963,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.650756789328606,0.103041011647722,6.3182930724657,3.54790849658528,1.72279661398852,0.650060246036521,0,1.7400729292582,2.7728751080636,3.07007349452259,3.99726060205139,0,0,5.88063729171096,1.60257664164127,0,0,0,0,0,0,0,0,0,0,0,0,43.5425292150811,16.4517300853737,4.76575484809562,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.438450885253763,0,0,0,0.30982349809975,0,0,0,0,0,0,0.987884678879706,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.6557641036396,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.879049075631364,0,0,0,0,0.296964680832639,0,5.96488588659779,3.93874365949436,0,0,0,2.98871982376605,0,0,1.32949287252801,0,0,0,0,0,0,0,0,6.78532922266653,7.51421595110995,5.98841394003583,0,0,0,0,0,1.18193840883968,0,7.87332456134787,0,4.42870692906919,8.92413645828019,448.590304772225,333.396468692642,382.43861892589,30.4945702044022,0,0,0,0,0.69169171316418,0.628303510868405,0.108647371922008,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123563938946503,0,8.89694955344937,0,11.713222286267,0,0.19566461893209,0,0,0,21.4250933141343,41.1976499177742,0,0,0,0,0,0,0,0,0,0,0,0,4.64362287673365,0,0,0,0,0.970817393606503,11.9769792613682,0,1.58971689362392,5.38141765624969,0.586654148204409,0,0,0,0,0,0,0,0,0,12.5031869587725,9.62346186073465,0.815985741090574,1.73370353940911,7.80546375322726,9.03575500687154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,17.4950531758047,10.6238656767029,0,0,0,0,0,2.79447960626913,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.81552087141687,0,0,0,10.4719194652856,7.80172350281871,0,0,0,0,0,0,0,0,0,0,0,0,0,2.51286554000375,6.2024772597689,2.3184990331373,6.50992839673799,26.3768230017433,41.4874652747828,10.6184849029766,26.8396351776288,0.249960815924213,0.151649117541648,2.56918800190471,0,0,3.62302571527063,0,0.233713309847224,0,0.189403005275089,0,0.889811221596536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.80033317595784,1.37358282073117,1.34699795506368,6.30924491143255,0,0,0,0,0,0.97894681802587,0,0,0,0,0,0,0,0,0,5.3920790099175,0,0,0,1.31043939538565,0,0,0,0,0,1.70254786070051,5.70728445780706,0,6.22077260032973,0,22.8588600160965,1.57265941855896,0,0,1.48802444071178,0,0,0,0,0,0.352675943690684,0,4.81719188223446,2.8339315265117,7.02388979851466,5.9483745629819,12.8556565073076,3.52701987567511,10.3344413204385,19.9877188362816,0,0,0,0,0,0,3.58049199809294,0,0,0,0,0,0,4.72763092328763,4.68646859168308,5.78723030203315,2.72687983833799,8.75159694429151,0,0,0,0,12.8568440610789,23.8761442775365,4.24875922965642,0.227662191351298,0,0,0,11.5548546060614,4.60409414939944,0,0,0,11.7836692437001,0,0,0,0,5.71812353413251,0,1.97610423125813,73.3681909116885,0,0.207216164163037,0,0,0,3.78662402337809,5.62408471410441,0,0,0,0,0,0,0,0,0.3079884205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| ||
|short_description=p1@ZIC1 | |||
}} | }} |
Latest revision as of 18:46, 15 September 2015
Short description: | p1@ZIC1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ZIC1_5end |
Coexpression cluster: | C11_cerebellum_medulla_pons_parietal_occipital_middle_medial |
Association with transcript: | -2bp_to_ENST00000282928_5end |
EntrezGene: | ZIC1 |
HGNC: | 12872 |
UniProt: | Q15915 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neural cell | 3.59e-12 | 25 |
neurectodermal cell | 1.49e-10 | 59 |
glial cell (sensu Vertebrata) | 7.02e-10 | 15 |
glial cell | 7.02e-10 | 15 |
glioblast | 7.02e-10 | 15 |
glioblast (sensu Vertebrata) | 7.02e-10 | 15 |
neuron associated cell | 8.00e-10 | 17 |
neuron associated cell (sensu Vertebrata) | 8.00e-10 | 17 |
ectodermal cell | 1.94e-09 | 72 |
skin fibroblast | 1.18e-08 | 23 |
oligodendrocyte | 1.59e-08 | 7 |
macroglial cell | 1.59e-08 | 7 |
astrocyte | 1.59e-08 | 7 |
oligodendrocyte precursor cell | 1.59e-08 | 7 |
hair follicle cell | 1.83e-07 | 5 |
migratory neural crest cell | 2.21e-07 | 41 |