FFCP PHASE1:Hg19::chr5:14441222..14441241,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=7204 | |EntrezGene=7204 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=12303 | |HGNC=12303 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=294bp_to_ENST00000515710,uc003jfi.1_5end | |association_with_transcript=294bp_to_ENST00000515710,uc003jfi.1_5end | ||
|cluster_id=chr5:14441222..14441241,+ | |||
|coexpression_cluster_id=C950 | |coexpression_cluster_id=C950 | ||
|description=CAGE_peak_4_at_TRIO_5end | |description=CAGE_peak_4_at_TRIO_5end | ||
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|ontology_enrichment_celltype=CL:0000055!1.82e-19!180;CL:0000680!4.49e-15!57;CL:0000056!4.49e-15!57;CL:0000355!4.49e-15!57;CL:0000183!7.67e-15!59;CL:0000057!1.50e-13!75;CL:0000187!2.51e-13!54;CL:0000393!5.76e-12!60;CL:0000211!5.76e-12!60;CL:0000192!1.95e-10!42;CL:0000514!1.95e-10!42;CL:0000359!5.56e-09!32;CL:0002620!1.21e-07!23 | |ontology_enrichment_celltype=CL:0000055!1.82e-19!180;CL:0000680!4.49e-15!57;CL:0000056!4.49e-15!57;CL:0000355!4.49e-15!57;CL:0000183!7.67e-15!59;CL:0000057!1.50e-13!75;CL:0000187!2.51e-13!54;CL:0000393!5.76e-12!60;CL:0000211!5.76e-12!60;CL:0000192!1.95e-10!42;CL:0000514!1.95e-10!42;CL:0000359!5.56e-09!32;CL:0002620!1.21e-07!23 | ||
|ontology_enrichment_celltype_v019=CL:0000359;1.95e-08;32!CL:0000188;1.90e-07;9!CL:0002334;2.14e-07;12!CL:0000680;6.76e-07;7!CL:0000187;7.36e-07;55 | |ontology_enrichment_celltype_v019=CL:0000359;1.95e-08;32!CL:0000188;1.90e-07;9!CL:0002334;2.14e-07;12!CL:0000680;6.76e-07;7!CL:0000187;7.36e-07;55 | ||
|ontology_enrichment_celltype_v019_2=CL:0000680,1.28e-13,58;CL:0000056,1.28e-13,58;CL:0000355,1.28e-13,58;CL:0000187,1.46e-11,55;CL:0000393,5.89e-11,61;CL:0000211,5.89e-11,61;CL:0000057,9.41e-10,76;CL:0000359,1.70e-08,32;CL:0000192,3.46e-08,43;CL:0000514,3.46e-08,43;CL:0002334,1.74e-07,12;CL:0000188,2.50e-07,9 | |||
|ontology_enrichment_development_v019=CL:0000355;4.11e-08;58 | |ontology_enrichment_development_v019=CL:0000355;4.11e-08;58 | ||
|ontology_enrichment_disease=DOID:2394!8.06e-07!14 | |ontology_enrichment_disease=DOID:2394!8.06e-07!14 | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000475!1.05e-23!365;UBERON:0000073!4.77e-20!94;UBERON:0001016!4.77e-20!94;UBERON:0005743!2.24e-19!86;UBERON:0004290!5.18e-19!70;UBERON:0001017!5.29e-19!82;UBERON:0002616!1.86e-18!59;UBERON:0000119!4.14e-18!312;UBERON:0000955!1.09e-17!69;UBERON:0006238!1.09e-17!69;UBERON:0003075!4.94e-17!86;UBERON:0007284!4.94e-17!86;UBERON:0000483!7.07e-17!309;UBERON:0000914!1.29e-16!83;UBERON:0002329!1.29e-16!83;UBERON:0003077!1.29e-16!83;UBERON:0003059!1.29e-16!83;UBERON:0007282!1.29e-16!83;UBERON:0009618!1.29e-16!83;UBERON:0007285!1.29e-16!83;UBERON:0001049!1.38e-16!57;UBERON:0005068!1.38e-16!57;UBERON:0006241!1.38e-16!57;UBERON:0007135!1.38e-16!57;UBERON:0002385!1.92e-16!63;UBERON:0001015!1.92e-16!63;UBERON:0000383!1.92e-16!63;UBERON:0001134!2.80e-16!61;UBERON:0002036!2.80e-16!61;UBERON:0003082!2.80e-16!61;UBERON:0002346!4.21e-16!90;UBERON:0002619!7.07e-16!22;UBERON:0002780!7.40e-16!41;UBERON:0001890!7.40e-16!41;UBERON:0006240!7.40e-16!41;UBERON:0001893!1.98e-15!34;UBERON:0000956!2.72e-15!25;UBERON:0000203!2.72e-15!25;UBERON:0003080!4.24e-15!42;UBERON:0001950!7.28e-15!20;UBERON:0002791!7.86e-15!33;UBERON:0001869!8.18e-15!32;UBERON:0002020!1.63e-14!34;UBERON:0003528!1.63e-14!34;UBERON:0000486!2.02e-14!82;UBERON:0007023!2.19e-14!115;UBERON:0000153!2.29e-14!129;UBERON:0007811!2.29e-14!129;UBERON:0000033!4.25e-14!123;UBERON:0000481!4.40e-14!347;UBERON:0003056!5.00e-14!61;UBERON:0004121!5.50e-13!169;UBERON:0000468!9.20e-13!659;UBERON:0000025!1.39e-12!194;UBERON:0000924!1.43e-12!173;UBERON:0006601!1.43e-12!173;UBERON:0000467!8.11e-11!625;UBERON:0000477!8.30e-11!286;UBERON:0000480!1.15e-10!626;UBERON:0000479!1.75e-10!787;UBERON:0004111!3.62e-09!241;UBERON:0004573!4.48e-09!33;UBERON:0004571!4.48e-09!33;UBERON:0002049!2.62e-08!79;UBERON:0007798!2.62e-08!79;UBERON:0002050!2.93e-08!605;UBERON:0005423!2.93e-08!605;UBERON:0004872!3.54e-08!84;UBERON:0000923!4.22e-08!604;UBERON:0005291!4.22e-08!604;UBERON:0006598!4.22e-08!604;UBERON:0002532!4.22e-08!604;UBERON:0000922!4.65e-08!612;UBERON:0001637!7.84e-08!42;UBERON:0003509!7.84e-08!42;UBERON:0004572!7.84e-08!42;UBERON:0005256!9.22e-08!143;UBERON:0001135!8.90e-07!15;UBERON:0001013!9.97e-07!14 | |ontology_enrichment_uberon=UBERON:0000475!1.05e-23!365;UBERON:0000073!4.77e-20!94;UBERON:0001016!4.77e-20!94;UBERON:0005743!2.24e-19!86;UBERON:0004290!5.18e-19!70;UBERON:0001017!5.29e-19!82;UBERON:0002616!1.86e-18!59;UBERON:0000119!4.14e-18!312;UBERON:0000955!1.09e-17!69;UBERON:0006238!1.09e-17!69;UBERON:0003075!4.94e-17!86;UBERON:0007284!4.94e-17!86;UBERON:0000483!7.07e-17!309;UBERON:0000914!1.29e-16!83;UBERON:0002329!1.29e-16!83;UBERON:0003077!1.29e-16!83;UBERON:0003059!1.29e-16!83;UBERON:0007282!1.29e-16!83;UBERON:0009618!1.29e-16!83;UBERON:0007285!1.29e-16!83;UBERON:0001049!1.38e-16!57;UBERON:0005068!1.38e-16!57;UBERON:0006241!1.38e-16!57;UBERON:0007135!1.38e-16!57;UBERON:0002385!1.92e-16!63;UBERON:0001015!1.92e-16!63;UBERON:0000383!1.92e-16!63;UBERON:0001134!2.80e-16!61;UBERON:0002036!2.80e-16!61;UBERON:0003082!2.80e-16!61;UBERON:0002346!4.21e-16!90;UBERON:0002619!7.07e-16!22;UBERON:0002780!7.40e-16!41;UBERON:0001890!7.40e-16!41;UBERON:0006240!7.40e-16!41;UBERON:0001893!1.98e-15!34;UBERON:0000956!2.72e-15!25;UBERON:0000203!2.72e-15!25;UBERON:0003080!4.24e-15!42;UBERON:0001950!7.28e-15!20;UBERON:0002791!7.86e-15!33;UBERON:0001869!8.18e-15!32;UBERON:0002020!1.63e-14!34;UBERON:0003528!1.63e-14!34;UBERON:0000486!2.02e-14!82;UBERON:0007023!2.19e-14!115;UBERON:0000153!2.29e-14!129;UBERON:0007811!2.29e-14!129;UBERON:0000033!4.25e-14!123;UBERON:0000481!4.40e-14!347;UBERON:0003056!5.00e-14!61;UBERON:0004121!5.50e-13!169;UBERON:0000468!9.20e-13!659;UBERON:0000025!1.39e-12!194;UBERON:0000924!1.43e-12!173;UBERON:0006601!1.43e-12!173;UBERON:0000467!8.11e-11!625;UBERON:0000477!8.30e-11!286;UBERON:0000480!1.15e-10!626;UBERON:0000479!1.75e-10!787;UBERON:0004111!3.62e-09!241;UBERON:0004573!4.48e-09!33;UBERON:0004571!4.48e-09!33;UBERON:0002049!2.62e-08!79;UBERON:0007798!2.62e-08!79;UBERON:0002050!2.93e-08!605;UBERON:0005423!2.93e-08!605;UBERON:0004872!3.54e-08!84;UBERON:0000923!4.22e-08!604;UBERON:0005291!4.22e-08!604;UBERON:0006598!4.22e-08!604;UBERON:0002532!4.22e-08!604;UBERON:0000922!4.65e-08!612;UBERON:0001637!7.84e-08!42;UBERON:0003509!7.84e-08!42;UBERON:0004572!7.84e-08!42;UBERON:0005256!9.22e-08!143;UBERON:0001135!8.90e-07!15;UBERON:0001013!9.97e-07!14 | ||
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| ||
|short_description=p4@TRIO | |short_description=p4@TRIO | ||
}} | }} |
Latest revision as of 19:26, 15 September 2015
Short description: | p4@TRIO |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_TRIO_5end |
Coexpression cluster: | C950_liposarcoma_extraskeletal_Fibroblast_Smooth_Preadipocyte_neuroblastoma_mesenchymal |
Association with transcript: | 294bp_to_ENST00000515710, uc003jfi.1_5end |
EntrezGene: | TRIO |
HGNC: | 12303 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
muscle precursor cell | 1.28e-13 | 58 |
myoblast | 1.28e-13 | 58 |
multi-potent skeletal muscle stem cell | 1.28e-13 | 58 |
muscle cell | 1.46e-11 | 55 |
electrically responsive cell | 5.89e-11 | 61 |
electrically active cell | 5.89e-11 | 61 |
fibroblast | 9.41e-10 | 76 |
vascular associated smooth muscle cell | 1.70e-08 | 32 |
smooth muscle cell | 3.46e-08 | 43 |
smooth muscle myoblast | 3.46e-08 | 43 |
preadipocyte | 1.74e-07 | 12 |
cell of skeletal muscle | 2.50e-07 | 9 |