FFCP PHASE1:Hg19::chr1:228604572..228604589,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=51127 | |EntrezGene=51127 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=13430 | |HGNC=13430 | ||
|TSSclassifier=strong | |||
|UniProt=Q9Y577 | |UniProt=Q9Y577 | ||
|association_with_transcript=0bp_to_NM_001024940,NM_001134855,NM_016102,uc001hsu.2,uc001hsv.2,uc001hsw.2,uc009xfb.2_5end | |association_with_transcript=0bp_to_NM_001024940,NM_001134855,NM_016102,uc001hsu.2,uc001hsv.2,uc001hsw.2,uc009xfb.2_5end | ||
|cluster_id=chr1:228604572..228604589,- | |||
|coexpression_cluster_id=C3947 | |||
|description=CAGE_peak_4_at_TRIM17_5end | |description=CAGE_peak_4_at_TRIM17_5end | ||
|id=chr1:228604572..228604589,- | |id=chr1:228604572..228604589,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;1.76e-08;82!UBERON:0006215;1.42e-07;3 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!1.69e-36!57;UBERON:0005068!1.69e-36!57;UBERON:0006241!1.69e-36!57;UBERON:0007135!1.69e-36!57;UBERON:0005743!1.07e-33!86;UBERON:0001017!2.48e-33!82;UBERON:0000073!2.94e-33!94;UBERON:0001016!2.94e-33!94;UBERON:0002616!2.00e-31!59;UBERON:0000955!2.03e-31!69;UBERON:0006238!2.03e-31!69;UBERON:0002346!2.05e-30!90;UBERON:0003080!3.47e-30!42;UBERON:0002020!1.97e-29!34;UBERON:0003528!1.97e-29!34;UBERON:0002780!2.86e-29!41;UBERON:0001890!2.86e-29!41;UBERON:0006240!2.86e-29!41;UBERON:0001893!3.07e-29!34;UBERON:0003075!4.31e-29!86;UBERON:0007284!4.31e-29!86;UBERON:0001869!2.35e-28!32;UBERON:0002791!3.14e-28!33;UBERON:0003056!2.02e-23!61;UBERON:0007023!2.07e-23!115;UBERON:0000153!2.72e-21!129;UBERON:0007811!2.72e-21!129;UBERON:0000924!7.85e-21!173;UBERON:0006601!7.85e-21!173;UBERON:0000956!8.49e-21!25;UBERON:0000203!8.49e-21!25;UBERON:0000033!5.53e-20!123;UBERON:0004121!1.19e-19!169;UBERON:0002619!1.71e-18!22;UBERON:0001950!2.50e-16!20;UBERON:0000064!9.65e-11!219;UBERON:0002420!1.13e-10!9;UBERON:0007245!1.13e-10!9;UBERON:0010009!1.13e-10!9;UBERON:0010011!1.13e-10!9;UBERON:0000454!1.13e-10!9;UBERON:0002308!4.04e-10!9;UBERON:0000125!4.04e-10!9;UBERON:0009663!1.71e-08!7;UBERON:0000200!3.55e-08!6;UBERON:0003076!1.16e-07!15;UBERON:0003057!1.16e-07!15;UBERON:0001871!1.60e-07!7;UBERON:0000349!3.85e-07!5;UBERON:0004733!4.44e-07!12;UBERON:0002028!4.44e-07!12;UBERON:0007277!4.44e-07!12;UBERON:0000025!5.85e-07!194 | |ontology_enrichment_uberon=UBERON:0001049!1.69e-36!57;UBERON:0005068!1.69e-36!57;UBERON:0006241!1.69e-36!57;UBERON:0007135!1.69e-36!57;UBERON:0005743!1.07e-33!86;UBERON:0001017!2.48e-33!82;UBERON:0000073!2.94e-33!94;UBERON:0001016!2.94e-33!94;UBERON:0002616!2.00e-31!59;UBERON:0000955!2.03e-31!69;UBERON:0006238!2.03e-31!69;UBERON:0002346!2.05e-30!90;UBERON:0003080!3.47e-30!42;UBERON:0002020!1.97e-29!34;UBERON:0003528!1.97e-29!34;UBERON:0002780!2.86e-29!41;UBERON:0001890!2.86e-29!41;UBERON:0006240!2.86e-29!41;UBERON:0001893!3.07e-29!34;UBERON:0003075!4.31e-29!86;UBERON:0007284!4.31e-29!86;UBERON:0001869!2.35e-28!32;UBERON:0002791!3.14e-28!33;UBERON:0003056!2.02e-23!61;UBERON:0007023!2.07e-23!115;UBERON:0000153!2.72e-21!129;UBERON:0007811!2.72e-21!129;UBERON:0000924!7.85e-21!173;UBERON:0006601!7.85e-21!173;UBERON:0000956!8.49e-21!25;UBERON:0000203!8.49e-21!25;UBERON:0000033!5.53e-20!123;UBERON:0004121!1.19e-19!169;UBERON:0002619!1.71e-18!22;UBERON:0001950!2.50e-16!20;UBERON:0000064!9.65e-11!219;UBERON:0002420!1.13e-10!9;UBERON:0007245!1.13e-10!9;UBERON:0010009!1.13e-10!9;UBERON:0010011!1.13e-10!9;UBERON:0000454!1.13e-10!9;UBERON:0002308!4.04e-10!9;UBERON:0000125!4.04e-10!9;UBERON:0009663!1.71e-08!7;UBERON:0000200!3.55e-08!6;UBERON:0003076!1.16e-07!15;UBERON:0003057!1.16e-07!15;UBERON:0001871!1.60e-07!7;UBERON:0000349!3.85e-07!5;UBERON:0004733!4.44e-07!12;UBERON:0002028!4.44e-07!12;UBERON:0007277!4.44e-07!12;UBERON:0000025!5.85e-07!194 | ||
|ontology_enrichment_uberon_v019=UBERON:0001869;2.24e-55;32!UBERON:0002791;5.56e-51;32!UBERON:0001893;1.00e-50;34!UBERON:0003528;2.96e-48;34!UBERON:0002020;2.96e-48;34!UBERON:0002619;8.76e-48;22!UBERON:0000956;7.66e-42;25!UBERON:0000203;7.66e-42;25!UBERON:0001950;5.16e-40;20!UBERON:0002780;4.40e-39;41!UBERON:0001890;4.40e-39;41!UBERON:0000200;2.45e-27;6!UBERON:0000073;1.25e-26;53!UBERON:0002616;1.25e-26;53!UBERON:0001017;1.47e-21;75!UBERON:0000955;7.73e-20;68!UBERON:0002420;1.16e-18;9!UBERON:0007245;1.16e-18;9!UBERON:0010009;1.16e-18;9!UBERON:0010011;1.16e-18;9!UBERON:0000454;1.16e-18;9!UBERON:0009663;8.32e-17;7!UBERON:0000349;2.65e-15;5!UBERON:0001872;7.95e-15;5!UBERON:0001016;1.22e-14;83!UBERON:0001870;1.39e-14;3!UBERON:0000125;5.16e-13;9!UBERON:0002308;5.16e-13;9!UBERON:0000369;2.16e-11;4!UBERON:0002435;2.16e-11;4!UBERON:0000204;2.16e-11;4!UBERON:0001871;5.14e-11;6!UBERON:0002702;1.66e-10;2!UBERON:0002771;1.91e-10;2!UBERON:0001954;2.41e-10;2!UBERON:0001875;2.41e-10;2!UBERON:0003022;2.41e-10;2!UBERON:0002421;2.41e-10;2!UBERON:0006514;2.41e-10;2!UBERON:0002600;2.41e-10;2!UBERON:0005383;1.42e-07;3!UBERON:0005382;1.42e-07;3!UBERON:0007023;3.00e-07;114!UBERON:0011216;4.66e-07;132 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001869,9.57e-63,32;UBERON:0001893,7.33e-59,34;UBERON:0002791,3.18e-57,32;UBERON:0003528,1.14e-53,34;UBERON:0002020,1.14e-53,34;UBERON:0002780,8.09e-53,41;UBERON:0001890,8.09e-53,41;UBERON:0003080,8.09e-53,41;UBERON:0006240,8.09e-53,41;UBERON:0000073,6.10e-48,53;UBERON:0002616,6.10e-48,53;UBERON:0002619,8.10e-48,22;UBERON:0001049,4.16e-45,56;UBERON:0005068,4.16e-45,56;UBERON:0006241,4.16e-45,56;UBERON:0007135,4.16e-45,56;UBERON:0000955,2.45e-42,68;UBERON:0006238,2.45e-42,68;UBERON:0000956,7.15e-42,25;UBERON:0000203,7.15e-42,25;UBERON:0001950,5.23e-40,20;UBERON:0001017,1.30e-37,81;UBERON:0001016,5.28e-36,89;UBERON:0003056,5.09e-34,61;UBERON:0002346,5.87e-30,86;UBERON:0003075,3.93e-29,82;UBERON:0007284,3.93e-29,82;UBERON:0000200,3.58e-27,6;UBERON:0007023,1.66e-23,114;UBERON:0010371,8.42e-22,104;UBERON:0010314,2.84e-19,132;UBERON:0002420,1.03e-18,9;UBERON:0007245,1.03e-18,9;UBERON:0010009,1.03e-18,9;UBERON:0010011,1.03e-18,9;UBERON:0000454,1.03e-18,9;UBERON:0004121,1.10e-18,171;UBERON:0000924,1.10e-18,171;UBERON:0006601,1.10e-18,171;UBERON:0009663,7.34e-17,7;UBERON:0000349,1.59e-15,5;UBERON:0001872,1.11e-14,5;UBERON:0001870,2.12e-14,3;UBERON:0011216,6.20e-14,223;UBERON:0000125,4.69e-13,9;UBERON:0002308,4.69e-13,9;UBERON:0000025,1.78e-12,192;UBERON:0000369,1.42e-11,4;UBERON:0002435,1.42e-11,4;UBERON:0000204,1.42e-11,4;UBERON:0010082,1.42e-11,4;UBERON:0001871,3.98e-11,6;UBERON:0002771,1.19e-10,2;UBERON:0002702,1.66e-10,2;UBERON:0001954,2.11e-10,2;UBERON:0003022,2.11e-10,2;UBERON:0002421,2.11e-10,2;UBERON:0002600,2.11e-10,2;UBERON:0001875,3.52e-10,2;UBERON:0006514,3.52e-10,2;UBERON:0004111,9.38e-09,240;UBERON:0005383,1.38e-07,3;UBERON:0005382,1.38e-07,3 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0.245733936501509,1.39560233594486,0.218441372130172,0.263766978228454,0,0.331397375727916,0,0,0,0,0.246242116153576,0.204000691244253,0.313454721478088,0.572471974262113,0.684372125364421,0.251085279189606,0,0,0,0.393364276848904,0,0,0,0,0,0,0,0,0,0,0,0.223915474239924,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.393010762749165,0,0,0.32592226663359,0,0,0.222820913770347,0,0,0.270803863765016,0,0.130059347559878,0,0,0.289803085735052,0.14828656316206,0,0,0,0.383220493601921,0,0,0,0.651083453856419,0,0,0.127986611154418,0,0,0,0.201606743224732,0,0,2.43806866313962,0,0,0,0,0,0,0,0.0945348171640679,0.221729397462564,0,0.261958150995425,0.364295288292542,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.264818361626438,0.286836620748814,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245668634623536,0.103325781175765,0,0,0,0,0,0.125118519871964,0,0,0,0,0,0.358779271377724,0,0.211931901159562,0,0,0,0,0,0,0.252433774244115,0,0,0.355009592516614,0,0,0,0,0,0,0.265059536642971,0.116193942869518,0.207322110030741,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.603173834469785,0.185176890317059,0,0,0,0.115930404975077,0,0,0,0,0,0,0,0,0,0,0.335964256397719,0,0,0,0,0,0,0,0,0,0,0,0,1.71072446022705,0,0,0,0,0,0.07333828582095,0.129271715757778,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.599837947092342,0,0,0,0,0,0,0,0,0.179060963239896,0,0,0,0,0.254094624222463,0,0,0.167516265334349,0,0,0,0,0,0,0,0,0,0,0.117141414992713,0,0,0,0,0,0,0.195801157462741,0,0,0,0,0,1.66435439510497,0.907170879989041,0,0,0,0,0,0,0,0,0,0,0,0,0,0.40101294060657,0.644566922551274,0,0,0,0,0.0770153371044148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.656029291399411,0,0,0.366277859273374,0.330037999682352,0,0,0,0,0,0,0,0,0.145016693914229,0,0,0.991709492165869,0.960950336825531,0.510450849978337,0.809262246844399,0,0.31481234683064,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.274537029736055,0,0,0,0,0,0,0,0,0.141405431953713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.329294892959902,0,0,0.0962221127255121,0,1.08890984861323,0.188287601553558,0.43050537267123,0,0.443430153536676,0,0,0,0.569647187174163,0,0,0,0,0,0,0,0.245040215981032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.9488432172667,0,0,0,0,0,0,0,0,0,0,0.296964680832639,1.22864280839693,0.994147647766298,5.34543782359948,0,0,0.63337622438398,0,0.552567831062295,0,0.409074730008619,0,0,0,0,0,0,0,0,2.90799823828566,0.556608588971108,3.99227596002388,0,0,0.724999575434793,0,0,0,0,0,1.38899995946634,0.885741385813839,5.42683973814336,3.05163472634166,5.08664595683633,0,1.75508317723178,0,0,0.307801034015188,0,0,0.0897576444097721,0,0,0,0,0,0,0.166211681900156,0,0,0,0,0.317873157960757,0,0,0,0,0,0,0,1.48260564340311,2.22415090103705,2.8193926366473,0.202203398942031,0,0.468528891450678,0,0,0,0.789168805698781,0,0.30607276163049,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0.261177619741208,0,0,0,0,0,0.193978032976839,0,0,0,0,1.2029051231617,0.782205530939212,0.320635281006135,0,0,0,0,0,0,0.248505071130865,0.471388069233591,0,0,0,0,3.00210144354895,1.36905378891993,0,0,0,0,0,0.717873024576814,0,0,0,0.268733889946905,0,3.49487848582361,0,0.0824158583811665,0,0,0,1.59045937961861,3.13267834056624,0,0.275078873194468,0.415440338029185,0,0,1.70098758642469,0,0,0.157363764404994,0,0,0.959575986597226,0,0,0,0,0,0,0,0,0,0.226624183040251,0,0,0.387848869084652,0.79339561045614,0,0.704815022316672,0.106787412567695,0.157204305099666,0,0,0,0,0.638341257770182,0,0,0,0,0,2.65820453990096,1.83039397352945,2.754200475543,0,0.776503360757966,0.248385611765534,0.968440444553616,0,0,0,0,0,0,0.149254802886874,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.601030435988874,0.380805212168795,0,0,0.214821114084977,0,0,0,0,0,0,0,0.214441591374926,0,0,0,0,0,0.926404341482917,0,0.353378291891762,0,0.168942440653073,0,0,0,4.28601152070365,0,0,0.163565394255844,0,0,0.211312123358627,0.19998739585493,0,0,0,0,0.139879507719444,0,1.79052119825112,0.107824811396682,0.157265941855896,0.436838552768056,0.169732529954025,0,1.36329340684902,0,0,0.0788617450012534,0,0,0.3062454773532,1.92687675289379,1.41696576325585,3.83121261737163,0.41023272848151,0,0.829887029570615,3.06803726700517,0,0,0,0,0.577628330751691,0,0,0,0.225630985047772,0,0,0,0,0,1.08060135389431,1.56215619722769,3.72036233702131,1.20490039368423,0,0,0,0.175871244359621,0,0,0,0,0.227662191351298,0.620916591138472,0,0,0.135939465953663,1.24968269769413,0,0,0,3.29942738823604,0,0.913158720509496,0,0,0.714765441766563,0,0,0,0.801711364730253,0,0,0,0,0,0,0.423387050190929,1.14553434272025,0,0,0.223710863595585,0,0,0,0,0,0,0,0,0.356760272332706,0,0,0.150962843566674,0.0771741581079447,0,0,0,0,0.196308467114945,0.891139200981258,0,0,0.0939839179798536,0.45120521581504,0,0,0,0,0,0,0.143339583151451,0,1.42782129400921,0.872701380680755,0,0,0.462175628631418,0,0,0.109265571963696,0.253397002022874,0,0.26721740526556,0,0,0,0,0.829169439458779,1.44806194206653,0.213233981900981,0.476128862927481,0,0.0620747142958579,0.112131862580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| ||
|short_description=p4@TRIM17 | |short_description=p4@TRIM17 | ||
}} | }} |
Latest revision as of 04:07, 16 September 2015
Short description: | p4@TRIM17 |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_TRIM17_5end |
Coexpression cluster: | C3947_cerebellum_amygdala_parietal_middle_caudate_occipital_olfactory |
Association with transcript: | 0bp_to_NM_001024940, NM_001134855, NM_016102, uc001hsu.2, uc001hsv.2, uc001hsw.2, uc009xfb.2_5end |
EntrezGene: | TRIM17 |
HGNC: | 13430 |
UniProt: | Q9Y577 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data