FFCP PHASE1:Hg19::chr19:1491014..1491037,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=92840 | |EntrezGene=92840 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=30078 | |HGNC=30078 | ||
|TSSclassifier=strong | |||
|UniProt=Q96HR9,A8MWX0,A8MXN1 | |UniProt=Q96HR9,A8MWX0,A8MXN1 | ||
|association_with_transcript=0bp_to_ENST00000233596,ENST00000395479,ENST00000395484_5end | |association_with_transcript=0bp_to_ENST00000233596,ENST00000395479,ENST00000395484_5end | ||
|cluster_id=chr19:1491014..1491037,+ | |||
|coexpression_cluster_id=C1 | |||
|description=CAGE_peak_2_at_REEP6_5end | |description=CAGE_peak_2_at_REEP6_5end | ||
|id=chr19:1491014..1491037,+ | |id=chr19:1491014..1491037,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000625;1.06e-07;11 | |||
|ontology_enrichment_celltype_v019_2=CL:0000625,1.97e-08,11;CL:0000084,4.51e-07,25;CL:0000827,4.51e-07,25;CL:0000791,8.71e-07,18;CL:0000789,8.71e-07,18;CL:0002420,8.71e-07,18;CL:0002419,8.71e-07,18;CL:0000790,8.71e-07,18 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!6.05e-18!115;UBERON:0001049!1.51e-15!57;UBERON:0005068!1.51e-15!57;UBERON:0006241!1.51e-15!57;UBERON:0007135!1.51e-15!57;UBERON:0002780!3.93e-15!41;UBERON:0001890!3.93e-15!41;UBERON:0006240!3.93e-15!41;UBERON:0002616!1.50e-14!59;UBERON:0003080!3.38e-14!42;UBERON:0001893!9.42e-14!34;UBERON:0001869!3.58e-13!32;UBERON:0002791!3.68e-13!33;UBERON:0000955!4.19e-13!69;UBERON:0006238!4.19e-13!69;UBERON:0002020!7.71e-13!34;UBERON:0003528!7.71e-13!34;UBERON:0001017!3.55e-12!82;UBERON:0002346!5.37e-12!90;UBERON:0000924!6.98e-12!173;UBERON:0006601!6.98e-12!173;UBERON:0003075!1.53e-11!86;UBERON:0007284!1.53e-11!86;UBERON:0005743!1.54e-11!86;UBERON:0002619!1.93e-11!22;UBERON:0004121!2.06e-11!169;UBERON:0000153!3.57e-11!129;UBERON:0007811!3.57e-11!129;UBERON:0000073!9.55e-11!94;UBERON:0001016!9.55e-11!94;UBERON:0000033!9.72e-11!123;UBERON:0001950!1.20e-10!20;UBERON:0003056!2.72e-10!61;UBERON:0000956!2.58e-09!25;UBERON:0000203!2.58e-09!25 | |ontology_enrichment_uberon=UBERON:0007023!6.05e-18!115;UBERON:0001049!1.51e-15!57;UBERON:0005068!1.51e-15!57;UBERON:0006241!1.51e-15!57;UBERON:0007135!1.51e-15!57;UBERON:0002780!3.93e-15!41;UBERON:0001890!3.93e-15!41;UBERON:0006240!3.93e-15!41;UBERON:0002616!1.50e-14!59;UBERON:0003080!3.38e-14!42;UBERON:0001893!9.42e-14!34;UBERON:0001869!3.58e-13!32;UBERON:0002791!3.68e-13!33;UBERON:0000955!4.19e-13!69;UBERON:0006238!4.19e-13!69;UBERON:0002020!7.71e-13!34;UBERON:0003528!7.71e-13!34;UBERON:0001017!3.55e-12!82;UBERON:0002346!5.37e-12!90;UBERON:0000924!6.98e-12!173;UBERON:0006601!6.98e-12!173;UBERON:0003075!1.53e-11!86;UBERON:0007284!1.53e-11!86;UBERON:0005743!1.54e-11!86;UBERON:0002619!1.93e-11!22;UBERON:0004121!2.06e-11!169;UBERON:0000153!3.57e-11!129;UBERON:0007811!3.57e-11!129;UBERON:0000073!9.55e-11!94;UBERON:0001016!9.55e-11!94;UBERON:0000033!9.72e-11!123;UBERON:0001950!1.20e-10!20;UBERON:0003056!2.72e-10!61;UBERON:0000956!2.58e-09!25;UBERON:0000203!2.58e-09!25 | ||
|ontology_enrichment_uberon_v019=UBERON:0001893;6.38e-20;34!UBERON:0001869;9.18e-20;32!UBERON:0002780;5.11e-19;41!UBERON:0001890;5.11e-19;41!UBERON:0002791;1.64e-18;32!UBERON:0003528;2.38e-17;34!UBERON:0002020;2.38e-17;34!UBERON:0002619;2.58e-17;22!UBERON:0001950;1.19e-15;20!UBERON:0000956;1.36e-14;25!UBERON:0000203;1.36e-14;25!UBERON:0000073;7.17e-13;53!UBERON:0002616;7.17e-13;53!UBERON:0002420;1.19e-09;9!UBERON:0007245;1.19e-09;9!UBERON:0010009;1.19e-09;9!UBERON:0010011;1.19e-09;9!UBERON:0000454;1.19e-09;9!UBERON:0000955;5.01e-09;68!UBERON:0001871;8.91e-09;6!UBERON:0001017;2.23e-07;75!UBERON:0000349;3.82e-07;5!UBERON:0007023;3.97e-07;114!UBERON:0009663;3.99e-07;7!UBERON:0000369;6.30e-07;4!UBERON:0002435;6.30e-07;4!UBERON:0000204;6.30e-07;4!UBERON:0000125;6.60e-07;9!UBERON:0002308;6.60e-07;9 | |||
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| ||
|short_description=p2@REEP6 | |short_description=p2@REEP6 | ||
}} | }} |
Latest revision as of 06:11, 16 September 2015
Short description: | p2@REEP6 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_REEP6_5end |
Coexpression cluster: | C1_testis_epididymis_embryonic_medulla_pituitary_trachea_caudate |
Association with transcript: | 0bp_to_ENST00000233596, ENST00000395479, ENST00000395484_5end |
EntrezGene: | REEP6 |
HGNC: | 30078 |
UniProt: | Q96HR9A8MWX0A8MXN1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CD8-positive, alpha-beta T cell | 1.97e-08 | 11 |
T cell | 4.51e-07 | 25 |
pro-T cell | 4.51e-07 | 25 |
mature alpha-beta T cell | 8.71e-07 | 18 |
alpha-beta T cell | 8.71e-07 | 18 |
immature T cell | 8.71e-07 | 18 |
mature T cell | 8.71e-07 | 18 |
immature alpha-beta T cell | 8.71e-07 | 18 |