FFCP PHASE1:Hg19::chr6:152793125..152793140,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=23345 | |EntrezGene=23345 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=17089 | |HGNC=17089 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000481502_5end | |association_with_transcript=0bp_to_ENST00000481502_5end | ||
|cluster_id=chr6:152793125..152793140,- | |||
|coexpression_cluster_id=C35 | |coexpression_cluster_id=C35 | ||
|description=CAGE_peak_25_at_SYNE1_5end | |description=CAGE_peak_25_at_SYNE1_5end | ||
|id=chr6:152793125..152793140,- | |id=chr6:152793125..152793140,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;1.07e-12;82!UBERON:0006222;5.97e-09;1 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:3371;5.97e-09;1!DOID:4549;5.97e-09;1!DOID:5861;5.97e-09;1!DOID:6496;5.97e-09;1 | |||
|ontology_enrichment_disease_v019_2=DOID:3371,6.72e-09,1;DOID:4549,6.72e-09,1;DOID:5861,6.72e-09,1;DOID:6496,6.72e-09,1 | |||
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|short_description=p25@SYNE1 | |short_description=p25@SYNE1 | ||
}} | }} |
Latest revision as of 06:48, 16 September 2015
Short description: | p25@SYNE1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_25_at_SYNE1_5end |
Coexpression cluster: | C35_caudate_putamen_diencephalon_nucleus_globus_thalamus_insula |
Association with transcript: | 0bp_to_ENST00000481502_5end |
EntrezGene: | SYNE1 |
HGNC: | 17089 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
chondrosarcoma | 6.72e-09 | 1 |
extraosseous chondrosarcoma | 6.72e-09 | 1 |
myxoid chondrosarcoma | 6.72e-09 | 1 |
extraskeletal myxoid chondrosarcoma | 6.72e-09 | 1 |